RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 TRAV7A0A075B6U4 112 aa2.29□□□□□ -2.04
SCFD1-209ENST00000553280 TRAV41A0A0B4J266 112 aa2.29□□□□□ -2.04
SCFD1-209ENST00000553280 hADV38S2A0JD32 116 aa2.29□□□□□ -2.04
SCFD1-209ENST00000553280 ZNF878C9JN71 531 aa2.29□□□□□ -2.04
SCFD1-209ENST00000553280 H3BT86 120 aa2.29□□□□□ -2.04
SCFD1-209ENST00000553280 CRYZL1O95825 349 aa2.29□□□□□ -2.04
SCFD1-209ENST00000553280 MSMBP08118 114 aa2.29□□□□□ -2.04
SCFD1-209ENST00000553280 CST2P09228 141 aa2.29□□□□□ -2.04
SCFD1-209ENST00000553280 HIST1H2BOP23527 126 aa2.29□□□□□ -2.04
SCFD1-209ENST00000553280 MSNP26038 577 aaKnown RBP2.29□□□□□ -2.04
SCFD1-209ENST00000553280 HIST1H2BBP33778 126 aa2.29□□□□□ -2.04
SCFD1-209ENST00000553280 RPL28P46779 137 aaKnown RBP2.29□□□□□ -2.04
SCFD1-209ENST00000553280 HIST1H2BDP58876 126 aa2.29□□□□□ -2.04
SCFD1-209ENST00000553280 RAB14P61106 215 aa2.29□□□□□ -2.04
SCFD1-209ENST00000553280 HIST1H2BCP62807 126 aa2.29□□□□□ -2.04
SCFD1-209ENST00000553280 HBA1P69905 142 aa2.29□□□□□ -2.04
SCFD1-209ENST00000553280 RPL18Q07020 188 aaKnown RBP2.29□□□□□ -2.04
SCFD1-209ENST00000553280 HIST2H2BEQ16778 126 aa2.29□□□□□ -2.04
SCFD1-209ENST00000553280 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.29□□□□□ -2.04
SCFD1-209ENST00000553280 OOSP2Q86WS3 158 aa2.29□□□□□ -2.04
SCFD1-209ENST00000553280 ZCCHC13Q8WW36 166 aaKnown RBP2.29□□□□□ -2.04
SCFD1-209ENST00000553280 HIST1H2BHQ93079 126 aa2.29□□□□□ -2.04
SCFD1-209ENST00000553280 BTF3L4Q96K17 158 aa2.29□□□□□ -2.04
SCFD1-209ENST00000553280 KLF6Q99612 283 aaPredicted RBP2.29□□□□□ -2.04
SCFD1-209ENST00000553280 HIST1H2BNQ99877 126 aa2.29□□□□□ -2.04
SCFD1-209ENST00000553280 HIST1H2BMQ99879 126 aa2.29□□□□□ -2.04
SCFD1-209ENST00000553280 NMNAT1Q9HAN9 279 aaPredicted RBP2.29□□□□□ -2.04
SCFD1-209ENST00000553280 TIMM22Q9Y584 194 aa2.29□□□□□ -2.04
SCFD1-209ENST00000553280 TIMM9Q9Y5J7 89 aa2.29□□□□□ -2.04
SCFD1-209ENST00000553280 WDR90Q96KV7 1748 aa2.28□□□□□ -2.04
SCFD1-209ENST00000553280 ADGRB3O60242 1522 aa2.28□□□□□ -2.04
SCFD1-209ENST00000553280 IGHV3-64A0A075B6Q5 118 aa2.28□□□□□ -2.04
SCFD1-209ENST00000553280 IGKV1D-43A0A0B4J1Z2 117 aa2.28□□□□□ -2.04
SCFD1-209ENST00000553280 EXOC1LA0A1B0GW35 172 aa2.28□□□□□ -2.04
SCFD1-209ENST00000553280 DPRXA6NFQ7 191 aa2.28□□□□□ -2.04
SCFD1-209ENST00000553280 GGT3PA6NGU5 568 aa2.28□□□□□ -2.04
SCFD1-209ENST00000553280 PIRO00625 290 aa2.28□□□□□ -2.04
SCFD1-209ENST00000553280 PDE6DO43924 150 aa2.28□□□□□ -2.04
SCFD1-209ENST00000553280 OR7C1O76099 320 aaPredicted RBP2.28□□□□□ -2.04
SCFD1-209ENST00000553280 IGKV1-5P01602 117 aa2.28□□□□□ -2.04
SCFD1-209ENST00000553280 IGHV3-7P01780 117 aa2.28□□□□□ -2.04
SCFD1-209ENST00000553280 AADACL3Q5VUY0 350 aa2.28□□□□□ -2.04
SCFD1-209ENST00000553280 TMEM42Q69YG0 159 aa2.28□□□□□ -2.04
SCFD1-209ENST00000553280 ZNF705AQ6ZN79 300 aaPredicted RBP2.28□□□□□ -2.04
SCFD1-209ENST00000553280 GDPD1Q8N9F7 314 aa2.28□□□□□ -2.04
SCFD1-209ENST00000553280 OR52L1Q8NGH7 329 aa2.28□□□□□ -2.04
SCFD1-209ENST00000553280 OR51A2Q8NGJ7 313 aa2.28□□□□□ -2.04
SCFD1-209ENST00000553280 OR13C4Q8NGS5 318 aa2.28□□□□□ -2.04
SCFD1-209ENST00000553280 CT55Q8WUE5 264 aa2.28□□□□□ -2.04
SCFD1-209ENST00000553280 ACOT12Q8WYK0 555 aa2.28□□□□□ -2.04
SCFD1-209ENST00000553280 DERL1Q9BUN8 251 aa2.28□□□□□ -2.04
SCFD1-209ENST00000553280 C11orf68Q9H3H3 251 aaKnown RBP2.28□□□□□ -2.04
SCFD1-209ENST00000553280 C14orf105Q9NVL8 296 aa2.28□□□□□ -2.04
SCFD1-209ENST00000553280 TP73-AS1Q9UF72 201 aa2.28□□□□□ -2.04
SCFD1-209ENST00000553280 COL4A2P08572 1712 aa2.28□□□□□ -2.05
SCFD1-209ENST00000553280 NYNRINQ9P2P1 1898 aaKnown RBP2.27□□□□□ -2.05
SCFD1-209ENST00000553280 TRAV38-1A0A0B4J264 116 aa2.27□□□□□ -2.05
SCFD1-209ENST00000553280 IRGMA1A4Y4 181 aa2.27□□□□□ -2.05
SCFD1-209ENST00000553280 SULT1A3P0DMM9 295 aa2.27□□□□□ -2.05
SCFD1-209ENST00000553280 SULT1A4P0DMN0 295 aa2.27□□□□□ -2.05
SCFD1-209ENST00000553280 EVX1P49640 407 aa2.27□□□□□ -2.05
SCFD1-209ENST00000553280 DEFA1P59665 94 aa2.27□□□□□ -2.05
SCFD1-209ENST00000553280 HES1Q14469 280 aa2.27□□□□□ -2.05
SCFD1-209ENST00000553280 C12orf74Q32Q52 190 aa2.27□□□□□ -2.05
SCFD1-209ENST00000553280 IBA57Q5T440 356 aaKnown RBP2.27□□□□□ -2.05
SCFD1-209ENST00000553280 C9orf64Q5T6V5 341 aa2.27□□□□□ -2.05
SCFD1-209ENST00000553280 RPL22L1Q6P5R6 122 aaKnown RBP2.27□□□□□ -2.05
SCFD1-209ENST00000553280 OR4X2Q8NGF9 303 aa2.27□□□□□ -2.05
SCFD1-209ENST00000553280 OR10X1Q8NGY0 326 aa2.27□□□□□ -2.05
SCFD1-209ENST00000553280 KIFC1Q9BW19 673 aa2.27□□□□□ -2.05
SCFD1-209ENST00000553280 C20orf27Q9GZN8 174 aa2.27□□□□□ -2.05
SCFD1-209ENST00000553280 NAT8Q9UHE5 227 aa2.27□□□□□ -2.05
SCFD1-209ENST00000553280 SAMHD1Q9Y3Z3 626 aaKnown RBP2.27□□□□□ -2.05
SCFD1-209ENST00000553280 ARL5AQ9Y689 179 aa2.27□□□□□ -2.05
SCFD1-209ENST00000553280 NEO1Q92859 1461 aa2.26□□□□□ -2.05
SCFD1-209ENST00000553280 ZNF532Q9HCE3 1301 aa2.26□□□□□ -2.05
SCFD1-209ENST00000553280 TMSB15BA0A087X1C1 80 aa2.26□□□□□ -2.05
SCFD1-209ENST00000553280 A0A0G2JQZ4 141 aa2.26□□□□□ -2.05
SCFD1-209ENST00000553280 ARRDC5A6NEK1 342 aa2.26□□□□□ -2.05
SCFD1-209ENST00000553280 FAM159BA6NKW6 160 aa2.26□□□□□ -2.05
SCFD1-209ENST00000553280 RFPL4AA6NLU0 287 aa2.26□□□□□ -2.05
SCFD1-209ENST00000553280 FABP5P3A8MUU1 101 aa2.26□□□□□ -2.05
SCFD1-209ENST00000553280 RFPL4AL1F8VTS6 287 aa2.26□□□□□ -2.05
SCFD1-209ENST00000553280 H7C2G1 150 aa2.26□□□□□ -2.05
SCFD1-209ENST00000553280 NEFHP12036 1026 aa2.26□□□□□ -2.05
SCFD1-209ENST00000553280 CYBAP13498 195 aa2.26□□□□□ -2.05
SCFD1-209ENST00000553280 S100A5P33763 92 aa2.26□□□□□ -2.05
SCFD1-209ENST00000553280 ERHP84090 104 aaKnown RBP2.26□□□□□ -2.05
SCFD1-209ENST00000553280 KRTAP6-3Q3LI67 103 aa2.26□□□□□ -2.05
SCFD1-209ENST00000553280 TEX36Q5VZQ5 186 aa2.26□□□□□ -2.05
SCFD1-209ENST00000553280 S100A7AQ86SG5 101 aa2.26□□□□□ -2.05
SCFD1-209ENST00000553280 RPP25LQ8N5L8 163 aaKnown RBP2.26□□□□□ -2.05
SCFD1-209ENST00000553280 PXT1Q8NFP0 134 aa2.26□□□□□ -2.05
SCFD1-209ENST00000553280 TOMM6Q96B49 74 aa2.26□□□□□ -2.05
SCFD1-209ENST00000553280 CHST6Q9GZX3 395 aa2.26□□□□□ -2.05
SCFD1-209ENST00000553280 RNASE7Q9H1E1 156 aaKnown RBP2.26□□□□□ -2.05
SCFD1-209ENST00000553280 CAMSAP1Q5T5Y3 1602 aa2.26□□□□□ -2.05
SCFD1-209ENST00000553280 RTL1A6NKG5 1358 aa2.25□□□□□ -2.05
SCFD1-209ENST00000553280 TRAV9-1A0A075B6T8 112 aa2.25□□□□□ -2.05
SCFD1-209ENST00000553280 OR2B3O76000 313 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms