RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 THOC7Q6I9Y2 204 aaKnown RBP14.68□□□□□ -0.06
PTCH1-227ENST00000553256 OR13C8Q8NGS7 320 aa14.68□□□□□ -0.06
PTCH1-227ENST00000553256 TP53RKQ96S44 253 aa14.68□□□□□ -0.06
PTCH1-227ENST00000553256 COMMD5Q9GZQ3 224 aa14.68□□□□□ -0.06
PTCH1-227ENST00000553256 C6orf62Q9GZU0 229 aaPredicted RBP14.68□□□□□ -0.06
PTCH1-227ENST00000553256 ANKRD20A5PA0PJZ0 165 aa14.67□□□□□ -0.06
PTCH1-227ENST00000553256 C15orf61A6NNL5 157 aa14.67□□□□□ -0.06
PTCH1-227ENST00000553256 H0Y980 276 aa14.67□□□□□ -0.06
PTCH1-227ENST00000553256 IGKV1-5P01602 117 aa14.67□□□□□ -0.06
PTCH1-227ENST00000553256 IFNA6P05013 189 aa14.67□□□□□ -0.06
PTCH1-227ENST00000553256 PIGPP57054 158 aa14.67□□□□□ -0.06
PTCH1-227ENST00000553256 HAPLN4Q86UW8 402 aa14.67□□□□□ -0.06
PTCH1-227ENST00000553256 OR4C16Q8NGL9 310 aa14.67□□□□□ -0.06
PTCH1-227ENST00000553256 OR1L8Q8NGR8 309 aa14.67□□□□□ -0.06
PTCH1-227ENST00000553256 MCFD2Q8NI22 146 aa14.67□□□□□ -0.06
PTCH1-227ENST00000553256 RTBDNQ9BSG5 229 aaPredicted RBP14.67□□□□□ -0.06
PTCH1-227ENST00000553256 THAP7Q9BT49 309 aaPredicted RBP14.67□□□□□ -0.06
PTCH1-227ENST00000553256 V9GYH0 126 aa14.67□□□□□ -0.06
PTCH1-227ENST00000553256 MFSD2BA6NFX1 497 aa14.66□□□□□ -0.06
PTCH1-227ENST00000553256 ZNF701M0R085 212 aaPredicted RBP14.66□□□□□ -0.06
PTCH1-227ENST00000553256 SERPINE2P07093 398 aa14.66□□□□□ -0.06
PTCH1-227ENST00000553256 CTSDP07339 412 aaPredicted RBP14.66□□□□□ -0.06
PTCH1-227ENST00000553256 TRAPPC2P0DI81 140 aa14.66□□□□□ -0.06
PTCH1-227ENST00000553256 TRAPPC2BP0DI82 140 aa14.66□□□□□ -0.06
PTCH1-227ENST00000553256 HIST1H1BP16401 226 aaKnown RBP14.66□□□□□ -0.06
PTCH1-227ENST00000553256 ERVK-16P61578 105 aa14.66□□□□□ -0.06
PTCH1-227ENST00000553256 IL18Q14116 193 aa14.66□□□□□ -0.06
PTCH1-227ENST00000553256 DEFB121Q5J5C9 76 aa14.66□□□□□ -0.06
PTCH1-227ENST00000553256 GDPD1Q8N9F7 314 aa14.66□□□□□ -0.06
PTCH1-227ENST00000553256 OR5B3Q8NH48 314 aa14.66□□□□□ -0.06
PTCH1-227ENST00000553256 ZNF414Q96IQ9 312 aa14.66□□□□□ -0.06
PTCH1-227ENST00000553256 C5orf66Q9H5L9 145 aa14.66□□□□□ -0.06
PTCH1-227ENST00000553256 SLC2A8Q9NY64 477 aa14.66□□□□□ -0.06
PTCH1-227ENST00000553256 DPPA5A6NC42 116 aa14.65□□□□□ -0.06
PTCH1-227ENST00000553256 PPP5D1E7EU14 171 aa14.65□□□□□ -0.06
PTCH1-227ENST00000553256 UCP1P25874 307 aa14.65□□□□□ -0.06
PTCH1-227ENST00000553256 PPP5CP53041 499 aa14.65□□□□□ -0.06
PTCH1-227ENST00000553256 MEF2DQ14814 521 aa14.65□□□□□ -0.06
PTCH1-227ENST00000553256 FAM209BQ5JX69 171 aa14.65□□□□□ -0.06
PTCH1-227ENST00000553256 HSD17B13Q7Z5P4 300 aaPredicted RBP14.65□□□□□ -0.06
PTCH1-227ENST00000553256 ZNF502Q8TBZ5 544 aa14.65□□□□□ -0.06
PTCH1-227ENST00000553256 MARCH1Q8TCQ1 289 aa14.65□□□□□ -0.06
PTCH1-227ENST00000553256 TRIM63Q969Q1 353 aa14.65□□□□□ -0.06
PTCH1-227ENST00000553256 RSL24D1Q9UHA3 163 aaKnown RBP14.65□□□□□ -0.06
PTCH1-227ENST00000553256 PRNDQ9UKY0 176 aa14.65□□□□□ -0.06
PTCH1-227ENST00000553256 GPR132Q9UNW8 380 aa14.65□□□□□ -0.06
PTCH1-227ENST00000553256 OR51B2Q9Y5P1 312 aa14.65□□□□□ -0.06
PTCH1-227ENST00000553256 F8W735 103 aaPredicted RBP14.64□□□□□ -0.07
PTCH1-227ENST00000553256 NOL3O60936 208 aaKnown RBP14.64□□□□□ -0.07
PTCH1-227ENST00000553256 AKAIN1P0CW23 69 aa14.64□□□□□ -0.07
PTCH1-227ENST00000553256 OR13C7P0DN81 318 aa14.64□□□□□ -0.07
PTCH1-227ENST00000553256 GP9P14770 177 aa14.64□□□□□ -0.07
PTCH1-227ENST00000553256 S100GP29377 79 aa14.64□□□□□ -0.07
PTCH1-227ENST00000553256 SURF2Q15527 256 aaPredicted RBP14.64□□□□□ -0.07
PTCH1-227ENST00000553256 ZNF79Q15937 498 aa14.64□□□□□ -0.07
PTCH1-227ENST00000553256 RPEL1Q2QD12 228 aa14.64□□□□□ -0.07
PTCH1-227ENST00000553256 Q8N1Y9 231 aa14.64□□□□□ -0.07
PTCH1-227ENST00000553256 OR6Q1Q8NGQ2 317 aa14.64□□□□□ -0.07
PTCH1-227ENST00000553256 LSM10Q969L4 123 aaKnown RBP14.64□□□□□ -0.07
PTCH1-227ENST00000553256 OR4C12Q96R67 309 aa14.64□□□□□ -0.07
PTCH1-227ENST00000553256 TSC22D3Q99576 134 aa14.64□□□□□ -0.07
PTCH1-227ENST00000553256 ELOVL1Q9BW60 279 aa14.64□□□□□ -0.07
PTCH1-227ENST00000553256 F11RQ9Y624 299 aaKnown RBP14.64□□□□□ -0.07
PTCH1-227ENST00000553256 S4R3C0 116 aa14.64□□□□□ -0.07
PTCH1-227ENST00000553256 DNAH7Q8WXX0 4024 aa14.63□□□□□ -0.07
PTCH1-227ENST00000553256 STAB2Q8WWQ8 2551 aa14.63□□□□□ -0.07
PTCH1-227ENST00000553256 A0A0B4J293 547 aa14.63□□□□□ -0.07
PTCH1-227ENST00000553256 C3orf85A0A1B0GTC6 90 aa14.63□□□□□ -0.07
PTCH1-227ENST00000553256 LGALS9O00182 355 aa14.63□□□□□ -0.07
PTCH1-227ENST00000553256 DHFRP00374 187 aa14.63□□□□□ -0.07
PTCH1-227ENST00000553256 IGHV3-23P01764 117 aa14.63□□□□□ -0.07
PTCH1-227ENST00000553256 HLA-AP01891 365 aaKnown RBP14.63□□□□□ -0.07
PTCH1-227ENST00000553256 PGAM2P15259 253 aa14.63□□□□□ -0.07
PTCH1-227ENST00000553256 DCTN2Q13561 401 aaKnown RBP14.63□□□□□ -0.07
PTCH1-227ENST00000553256 IZUMO4Q1ZYL8 232 aa14.63□□□□□ -0.07
PTCH1-227ENST00000553256 CCDC190Q86UF4 302 aa14.63□□□□□ -0.07
PTCH1-227ENST00000553256 GPHB5Q86YW7 130 aa14.63□□□□□ -0.07
PTCH1-227ENST00000553256 ZFAND1Q8TCF1 268 aa14.63□□□□□ -0.07
PTCH1-227ENST00000553256 A0A0G2JRQ6 117 aa14.62□□□□□ -0.07
PTCH1-227ENST00000553256 FABP12A6NFH5 140 aa14.62□□□□□ -0.07
PTCH1-227ENST00000553256 GGCTO75223 188 aaKnown RBP14.62□□□□□ -0.07
PTCH1-227ENST00000553256 EDN2P20800 178 aa14.62□□□□□ -0.07
PTCH1-227ENST00000553256 SP6Q3SY56 376 aa14.62□□□□□ -0.07
PTCH1-227ENST00000553256 SCGB2B2Q4G0G5 96 aa14.62□□□□□ -0.07
PTCH1-227ENST00000553256 AARDQ4LEZ3 155 aa14.62□□□□□ -0.07
PTCH1-227ENST00000553256 CLEC19AQ6UXS0 136 aa14.62□□□□□ -0.07
PTCH1-227ENST00000553256 LHFPL5Q8TAF8 219 aa14.62□□□□□ -0.07
PTCH1-227ENST00000553256 GLYATL2Q8WU03 294 aa14.62□□□□□ -0.07
PTCH1-227ENST00000553256 FKBP11Q9NYL4 201 aa14.62□□□□□ -0.07
PTCH1-227ENST00000553256 TRBV7-1A0A0A6YYK4 115 aa14.61□□□□□ -0.07
PTCH1-227ENST00000553256 INS-IGF2F8WCM5 200 aa14.61□□□□□ -0.07
PTCH1-227ENST00000553256 K7EIM0 57 aa14.61□□□□□ -0.07
PTCH1-227ENST00000553256 SNAPC5O75971 98 aa14.61□□□□□ -0.07
PTCH1-227ENST00000553256 OR2C1O95371 312 aa14.61□□□□□ -0.07
PTCH1-227ENST00000553256 CDS2O95674 445 aa14.61□□□□□ -0.07
PTCH1-227ENST00000553256 PRCDQ00LT1 54 aa14.61□□□□□ -0.07
PTCH1-227ENST00000553256 KLF9Q13886 244 aaPredicted RBP14.61□□□□□ -0.07
PTCH1-227ENST00000553256 PVRIGQ6DKI7 326 aa14.61□□□□□ -0.07
PTCH1-227ENST00000553256 C11orf87Q6NUJ2 197 aa14.61□□□□□ -0.07
PTCH1-227ENST00000553256 OR2C3Q8N628 320 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms