RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 TPPP3Q9BW30 176 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 DCSTAMPQ9H295 470 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 ISG20L2Q9H9L3 353 aaKnown RBP3.72□□□□□ -1.81
CKAP4-203ENST00000553039 BABAM2Q9NXR7 383 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 GNG8Q9UK08 70 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 SSR3Q9UNL2 185 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 GAB2Q9UQC2 676 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 IGKV1-12A0A0C4DH73 117 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 NBDYA0A0U1RRE5 68 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 PNMA8CA0A1B0GUJ8 204 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 TRDV1A0A1B0GX56 115 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 SLC31A2O15432 143 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 SULT1B1O43704 296 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 SULT1C4O75897 302 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 LALBAP00709 142 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 IGKV1D-12P01611 117 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 MT-ND4P03905 459 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 C8orf88P0DMB2 117 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 ZNF20P17024 532 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 GALP22466 123 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 FGF9P31371 208 aaPredicted RBP3.71□□□□□ -1.82
CKAP4-203ENST00000553039 ELLP55199 621 aaPredicted RBP3.71□□□□□ -1.82
CKAP4-203ENST00000553039 XGP55808 180 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 SSTP61278 116 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 RPS25P62851 125 aaKnown RBP3.71□□□□□ -1.82
CKAP4-203ENST00000553039 RHOGP84095 191 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 PSG5Q15238 335 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 C12orf74Q32Q52 190 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 CCDC58Q4VC31 144 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 TP53I3Q53FA7 332 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 RPL22L1Q6P5R6 122 aaKnown RBP3.71□□□□□ -1.82
CKAP4-203ENST00000553039 LINC00299Q6ZSB3 139 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 SSX6Q7RTT6 188 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 ZFP41Q8N8Y5 198 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 THAP8Q8NA92 274 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 SUMF2Q8NBJ7 301 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 NECAP1Q8NC96 275 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 OR1L1Q8NH94 360 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 DYNC2LI1Q8TCX1 351 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 CD300LFQ8TDQ1 290 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 TMEM203Q969S6 136 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 FAM46BQ96A09 425 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 SMIM19Q96E16 107 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 PELI1Q96FA3 418 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 CPNE2Q96FN4 548 aaPredicted RBP3.71□□□□□ -1.82
CKAP4-203ENST00000553039 PHB2Q99623 299 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 MRPL20Q9BYC9 149 aaKnown RBP3.71□□□□□ -1.82
CKAP4-203ENST00000553039 TTTY10Q9BZA0 68 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 OR51E2Q9H255 320 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 KCNIP1Q9NZI2 227 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 CCDC59Q9P031 241 aaKnown RBP3.71□□□□□ -1.82
CKAP4-203ENST00000553039 PIPOXQ9P0Z9 390 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 MLXQ9UH92 298 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 TRAPPC2LQ9UL33 140 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 WASHC3Q9Y3C0 194 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 UFC1Q9Y3C8 167 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 PAM16Q9Y3D7 125 aa3.71□□□□□ -1.82
CKAP4-203ENST00000553039 METTL15A6NJ78 407 aa3.7□□□□□ -1.82
CKAP4-203ENST00000553039 C15orf61A6NNL5 157 aa3.7□□□□□ -1.82
CKAP4-203ENST00000553039 GABRPO00591 440 aa3.7□□□□□ -1.82
CKAP4-203ENST00000553039 RAB29O14966 203 aa3.7□□□□□ -1.82
CKAP4-203ENST00000553039 YPEL1O60688 119 aa3.7□□□□□ -1.82
CKAP4-203ENST00000553039 SCGB2A1O75556 95 aa3.7□□□□□ -1.82
CKAP4-203ENST00000553039 GPX5O75715 221 aa3.7□□□□□ -1.82
CKAP4-203ENST00000553039 ARL6IP5O75915 188 aa3.7□□□□□ -1.82
CKAP4-203ENST00000553039 CA1P00915 261 aaPredicted RBP3.7□□□□□ -1.82
CKAP4-203ENST00000553039 SMR3BP02814 79 aaPredicted RBP3.7□□□□□ -1.82
CKAP4-203ENST00000553039 OR9G9P0C7N8 305 aa3.7□□□□□ -1.82
CKAP4-203ENST00000553039 MYL9P24844 172 aa3.7□□□□□ -1.82
CKAP4-203ENST00000553039 FABP5Q01469 135 aa3.7□□□□□ -1.82
CKAP4-203ENST00000553039 PLA2G7Q13093 441 aa3.7□□□□□ -1.82
CKAP4-203ENST00000553039 EXOSC2Q13868 293 aaKnown RBP3.7□□□□□ -1.82
CKAP4-203ENST00000553039 ODF4Q2M2E3 257 aa3.7□□□□□ -1.82
CKAP4-203ENST00000553039 YIF1BQ5BJH7 314 aa3.7□□□□□ -1.82
CKAP4-203ENST00000553039 LY6G6FQ5SQ64 297 aa3.7□□□□□ -1.82
CKAP4-203ENST00000553039 TMEM244Q5VVB8 128 aa3.7□□□□□ -1.82
CKAP4-203ENST00000553039 DMKNQ6E0U4 476 aaPredicted RBP3.7□□□□□ -1.82
CKAP4-203ENST00000553039 C22orf42Q6IC83 251 aa3.7□□□□□ -1.82
CKAP4-203ENST00000553039 FAM71F2Q6NXP2 309 aa3.7□□□□□ -1.82
CKAP4-203ENST00000553039 ZNF833PQ6ZTB9 187 aa3.7□□□□□ -1.82
CKAP4-203ENST00000553039 ZNF767PQ75MW2 155 aa3.7□□□□□ -1.82
CKAP4-203ENST00000553039 MS4A15Q8N5U1 240 aa3.7□□□□□ -1.82
CKAP4-203ENST00000553039 OR10V1Q8NGI7 309 aa3.7□□□□□ -1.82
CKAP4-203ENST00000553039 MCFD2Q8NI22 146 aa3.7□□□□□ -1.82
CKAP4-203ENST00000553039 KCNG3Q8TAE7 436 aa3.7□□□□□ -1.82
CKAP4-203ENST00000553039 PLPPR1Q8TBJ4 325 aa3.7□□□□□ -1.82
CKAP4-203ENST00000553039 NEK7Q8TDX7 302 aa3.7□□□□□ -1.82
CKAP4-203ENST00000553039 DEFB104AQ8WTQ1 72 aa3.7□□□□□ -1.82
CKAP4-203ENST00000553039 S100ZQ8WXG8 99 aa3.7□□□□□ -1.82
CKAP4-203ENST00000553039 AP3S1Q92572 193 aa3.7□□□□□ -1.82
CKAP4-203ENST00000553039 FGGYQ96C11 551 aa3.7□□□□□ -1.82
CKAP4-203ENST00000553039 YPEL2Q96QA6 119 aa3.7□□□□□ -1.82
CKAP4-203ENST00000553039 CHRDL1Q9BU40 450 aa3.7□□□□□ -1.82
CKAP4-203ENST00000553039 TXNL4BQ9NX01 149 aaKnown RBP3.7□□□□□ -1.82
CKAP4-203ENST00000553039 MSRB1Q9NZV6 116 aa3.7□□□□□ -1.82
CKAP4-203ENST00000553039 WDR83OSQ9Y284 106 aa3.7□□□□□ -1.82
CKAP4-203ENST00000553039 MRPS7Q9Y2R9 242 aaKnown RBP3.7□□□□□ -1.82
CKAP4-203ENST00000553039 TRBV9A0A0B4J1U6 114 aa3.69□□□□□ -1.82
CKAP4-203ENST00000553039 IGHV4-28A0A0C4DH34 117 aa3.69□□□□□ -1.82
CKAP4-203ENST00000553039 IGKV1-9A0A0C4DH69 117 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms