RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 WNK1Q9H4A3 2382 aa14.53□□□□□ -0.08
DDX54-209ENST00000551912 PIGBOS1A0A0B4J2F0 54 aa14.53□□□□□ -0.08
DDX54-209ENST00000551912 DBX1A6NMT0 343 aa14.53□□□□□ -0.08
DDX54-209ENST00000551912 BRI3O95415 125 aa14.53□□□□□ -0.08
DDX54-209ENST00000551912 AREGP15514 252 aa14.53□□□□□ -0.08
DDX54-209ENST00000551912 TPPP2P59282 170 aa14.53□□□□□ -0.08
DDX54-209ENST00000551912 PPP1R1AQ13522 171 aa14.53□□□□□ -0.08
DDX54-209ENST00000551912 C18orf65Q6ZTR6 163 aa14.53□□□□□ -0.08
DDX54-209ENST00000551912 LGI3Q8N145 548 aa14.53□□□□□ -0.08
DDX54-209ENST00000551912 ZNF491Q8N8L2 437 aa14.53□□□□□ -0.08
DDX54-209ENST00000551912 HINT2Q9BX68 163 aa14.53□□□□□ -0.08
DDX54-209ENST00000551912 NDUFA4L2Q9NRX3 87 aa14.53□□□□□ -0.08
DDX54-209ENST00000551912 ZNF257Q9Y2Q1 563 aa14.53□□□□□ -0.08
DDX54-209ENST00000551912 VWFP04275 2813 aa14.53□□□□□ -0.08
DDX54-209ENST00000551912 A0A0G2JRQ6 117 aa14.52□□□□□ -0.09
DDX54-209ENST00000551912 FAM240BA0A1B0GVZ2 78 aa14.52□□□□□ -0.09
DDX54-209ENST00000551912 NPIPB5A8MRT5 1133 aa14.52□□□□□ -0.09
DDX54-209ENST00000551912 SFT2D2O95562 160 aa14.52□□□□□ -0.09
DDX54-209ENST00000551912 TCRBP04435 133 aa14.52□□□□□ -0.09
DDX54-209ENST00000551912 IFITM3Q01628 133 aa14.52□□□□□ -0.09
DDX54-209ENST00000551912 C8orf86Q6ZUL3 223 aa14.52□□□□□ -0.09
DDX54-209ENST00000551912 HSD17B13Q7Z5P4 300 aaPredicted RBP14.52□□□□□ -0.09
DDX54-209ENST00000551912 SLC35G3Q8N808 338 aa14.52□□□□□ -0.09
DDX54-209ENST00000551912 C4orf3Q8WVX3 66 aa14.52□□□□□ -0.09
DDX54-209ENST00000551912 LSM10Q969L4 123 aaKnown RBP14.52□□□□□ -0.09
DDX54-209ENST00000551912 C20orf85Q9H1P6 137 aa14.52□□□□□ -0.09
DDX54-209ENST00000551912 A0A0B4J293 547 aa14.51□□□□□ -0.09
DDX54-209ENST00000551912 A0A0B4J2A0 478 aa14.51□□□□□ -0.09
DDX54-209ENST00000551912 IGLC7A0M8Q6 106 aa14.51□□□□□ -0.09
DDX54-209ENST00000551912 CRYGCP07315 174 aa14.51□□□□□ -0.09
DDX54-209ENST00000551912 ANXA7P20073 488 aaKnown RBP14.51□□□□□ -0.09
DDX54-209ENST00000551912 PSMB6P28072 239 aa14.51□□□□□ -0.09
DDX54-209ENST00000551912 RAB25P57735 213 aa14.51□□□□□ -0.09
DDX54-209ENST00000551912 TREML4Q6UXN2 200 aa14.51□□□□□ -0.09
DDX54-209ENST00000551912 ZNF429Q86V71 674 aa14.51□□□□□ -0.09
DDX54-209ENST00000551912 OR10W1Q8NGF6 305 aa14.51□□□□□ -0.09
DDX54-209ENST00000551912 SHPKQ9UHJ6 478 aa14.51□□□□□ -0.09
DDX54-209ENST00000551912 A0A0G2JLM5 398 aa14.5□□□□□ -0.09
DDX54-209ENST00000551912 DHFRP00374 187 aa14.5□□□□□ -0.09
DDX54-209ENST00000551912 HLA-AP01891 365 aaKnown RBP14.5□□□□□ -0.09
DDX54-209ENST00000551912 REG1AP05451 166 aa14.5□□□□□ -0.09
DDX54-209ENST00000551912 OR4E1P0C645 316 aa14.5□□□□□ -0.09
DDX54-209ENST00000551912 CTRB1P17538 263 aa14.5□□□□□ -0.09
DDX54-209ENST00000551912 HSPE1P61604 102 aaKnown RBP14.5□□□□□ -0.09
DDX54-209ENST00000551912 ANKRD55Q3KP44 614 aa14.5□□□□□ -0.09
DDX54-209ENST00000551912 CTRB2Q6GPI1 263 aa14.5□□□□□ -0.09
DDX54-209ENST00000551912 LYZL2Q7Z4W2 148 aa14.5□□□□□ -0.09
DDX54-209ENST00000551912 GPR146Q96CH1 333 aa14.5□□□□□ -0.09
DDX54-209ENST00000551912 GNB4Q9HAV0 340 aa14.5□□□□□ -0.09
DDX54-209ENST00000551912 NUDT15Q9NV35 164 aa14.5□□□□□ -0.09
DDX54-209ENST00000551912 PKD1L1Q8TDX9 2849 aa14.49□□□□□ -0.09
DDX54-209ENST00000551912 TRAV6A0A075B6T7 132 aa14.49□□□□□ -0.09
DDX54-209ENST00000551912 DUXBA0A1W2PPF3 345 aa14.49□□□□□ -0.09
DDX54-209ENST00000551912 C9orf170A2RU37 121 aa14.49□□□□□ -0.09
DDX54-209ENST00000551912 ST8SIA3O43173 380 aa14.49□□□□□ -0.09
DDX54-209ENST00000551912 PF4P02776 101 aa14.49□□□□□ -0.09
DDX54-209ENST00000551912 PRH1P02810 166 aa14.49□□□□□ -0.09
DDX54-209ENST00000551912 DEFA4P12838 97 aa14.49□□□□□ -0.09
DDX54-209ENST00000551912 MECP2P51608 486 aaKnown RBP14.49□□□□□ -0.09
DDX54-209ENST00000551912 DEFA1P59665 94 aa14.49□□□□□ -0.09
DDX54-209ENST00000551912 DEFA3P59666 94 aa14.49□□□□□ -0.09
DDX54-209ENST00000551912 PRCDQ00LT1 54 aa14.49□□□□□ -0.09
DDX54-209ENST00000551912 C4orf46Q504U0 113 aa14.49□□□□□ -0.09
DDX54-209ENST00000551912 Q6ZRM9 215 aa14.49□□□□□ -0.09
DDX54-209ENST00000551912 MRPL41Q8IXM3 137 aaKnown RBP14.49□□□□□ -0.09
DDX54-209ENST00000551912 LRTM2Q8N967 370 aa14.49□□□□□ -0.09
DDX54-209ENST00000551912 ENKURQ8TC29 256 aa14.49□□□□□ -0.09
DDX54-209ENST00000551912 USMG5Q96IX5 58 aa14.49□□□□□ -0.09
DDX54-209ENST00000551912 OR5B12Q96R08 314 aa14.49□□□□□ -0.09
DDX54-209ENST00000551912 PDCD10Q9BUL8 212 aa14.49□□□□□ -0.09
DDX54-209ENST00000551912 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.49□□□□□ -0.09
DDX54-209ENST00000551912 TRBV9A0A0B4J1U6 114 aa14.48□□□□□ -0.09
DDX54-209ENST00000551912 C13orf42A0A1B0GVH6 325 aa14.48□□□□□ -0.09
DDX54-209ENST00000551912 IFNA17P01571 189 aa14.48□□□□□ -0.09
DDX54-209ENST00000551912 OR13C7P0DN81 318 aa14.48□□□□□ -0.09
DDX54-209ENST00000551912 RHOGP84095 191 aa14.48□□□□□ -0.09
DDX54-209ENST00000551912 RUNX1Q01196 453 aa14.48□□□□□ -0.09
DDX54-209ENST00000551912 WT1-ASQ06250 92 aa14.48□□□□□ -0.09
DDX54-209ENST00000551912 DHRS2Q13268 280 aa14.48□□□□□ -0.09
DDX54-209ENST00000551912 NMSQ5H8A3 153 aa14.48□□□□□ -0.09
DDX54-209ENST00000551912 C19orf35Q6ZS72 473 aa14.48□□□□□ -0.09
DDX54-209ENST00000551912 LYG2Q86SG7 212 aa14.48□□□□□ -0.09
DDX54-209ENST00000551912 ALX4Q9H161 411 aaPredicted RBP14.48□□□□□ -0.09
DDX54-209ENST00000551912 CACNG5Q9UF02 275 aa14.48□□□□□ -0.09
DDX54-209ENST00000551912 FAM223BA6NKX1 122 aa14.47□□□□□ -0.09
DDX54-209ENST00000551912 I3L521 148 aa14.47□□□□□ -0.09
DDX54-209ENST00000551912 CCL24O00175 119 aa14.47□□□□□ -0.09
DDX54-209ENST00000551912 IGHV3-11P01762 117 aa14.47□□□□□ -0.09
DDX54-209ENST00000551912 LGALS1P09382 135 aaKnown RBP14.47□□□□□ -0.09
DDX54-209ENST00000551912 SULT1A3P0DMM9 295 aa14.47□□□□□ -0.09
DDX54-209ENST00000551912 SULT1A4P0DMN0 295 aa14.47□□□□□ -0.09
DDX54-209ENST00000551912 MYCNOSP40205 109 aa14.47□□□□□ -0.09
DDX54-209ENST00000551912 DEFB136Q30KP8 78 aa14.47□□□□□ -0.09
DDX54-209ENST00000551912 ETV3LQ6ZN32 361 aa14.47□□□□□ -0.09
DDX54-209ENST00000551912 FAM223AQ8IWN6 122 aa14.47□□□□□ -0.09
DDX54-209ENST00000551912 NECAP1Q8NC96 275 aa14.47□□□□□ -0.09
DDX54-209ENST00000551912 COQ8AQ8NI60 647 aa14.47□□□□□ -0.09
DDX54-209ENST00000551912 RAX2Q96IS3 184 aa14.47□□□□□ -0.09
DDX54-209ENST00000551912 PLEKHA3Q9HB20 300 aa14.47□□□□□ -0.09
DDX54-209ENST00000551912 OR2J3O76001 311 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms