RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 PSG5Q15238 335 aa10.13□□□□□ -0.79
ERBB3-219ENST00000551242 RNASEKQ6P5S7 137 aaKnown RBP10.13□□□□□ -0.79
ERBB3-219ENST00000551242 ZBTB34Q8NCN2 500 aa10.13□□□□□ -0.79
ERBB3-219ENST00000551242 NINJ1Q92982 152 aa10.13□□□□□ -0.79
ERBB3-219ENST00000551242 PKIBQ9C010 78 aa10.13□□□□□ -0.79
ERBB3-219ENST00000551242 GCM1Q9NP62 436 aa10.13□□□□□ -0.79
ERBB3-219ENST00000551242 CLCF1Q9UBD9 225 aa10.13□□□□□ -0.79
ERBB3-219ENST00000551242 PSG11Q9UQ72 335 aa10.13□□□□□ -0.79
ERBB3-219ENST00000551242 LY96Q9Y6Y9 160 aa10.13□□□□□ -0.79
ERBB3-219ENST00000551242 ZDBF2Q9HCK1 2354 aa10.13□□□□□ -0.79
ERBB3-219ENST00000551242 TRAV3A0A0B4J244 114 aa10.12□□□□□ -0.79
ERBB3-219ENST00000551242 IGHV5-10-1A0A0J9YXX1 117 aa10.12□□□□□ -0.79
ERBB3-219ENST00000551242 NUDT3O95989 172 aa10.12□□□□□ -0.79
ERBB3-219ENST00000551242 CELA3BP08861 270 aa10.12□□□□□ -0.79
ERBB3-219ENST00000551242 SSTR5P35346 364 aa10.12□□□□□ -0.79
ERBB3-219ENST00000551242 CA7P43166 264 aa10.12□□□□□ -0.79
ERBB3-219ENST00000551242 GABRA2P47869 451 aa10.12□□□□□ -0.79
ERBB3-219ENST00000551242 RPL8P62917 257 aaKnown RBP10.12□□□□□ -0.79
ERBB3-219ENST00000551242 TIGITQ495A1 244 aa10.12□□□□□ -0.79
ERBB3-219ENST00000551242 AMMECR1LQ6DCA0 310 aa10.12□□□□□ -0.79
ERBB3-219ENST00000551242 SPACA3Q8IXA5 215 aa10.12□□□□□ -0.79
ERBB3-219ENST00000551242 TUSC5Q8IXB3 177 aa10.12□□□□□ -0.79
ERBB3-219ENST00000551242 SLC24A4Q8NFF2 622 aa10.12□□□□□ -0.79
ERBB3-219ENST00000551242 SH2D7A6NKC9 451 aaPredicted RBP10.12□□□□□ -0.79
ERBB3-219ENST00000551242 PRSS46E5RG02 174 aa10.12□□□□□ -0.79
ERBB3-219ENST00000551242 MT-CO3P00414 261 aa10.12□□□□□ -0.79
ERBB3-219ENST00000551242 UBE2G1P62253 170 aa10.12□□□□□ -0.79
ERBB3-219ENST00000551242 LRRC10Q5BKY1 277 aa10.12□□□□□ -0.79
ERBB3-219ENST00000551242 IBA57Q5T440 356 aaKnown RBP10.12□□□□□ -0.79
ERBB3-219ENST00000551242 PRAMEF5Q5TYX0 476 aa10.12□□□□□ -0.79
ERBB3-219ENST00000551242 PRAMEF6Q5VXH4 476 aa10.12□□□□□ -0.79
ERBB3-219ENST00000551242 TAAR6Q96RI8 345 aa10.12□□□□□ -0.79
ERBB3-219ENST00000551242 ZPBPQ9BS86 351 aa10.12□□□□□ -0.79
ERBB3-219ENST00000551242 SSBP4Q9BWG4 385 aaPredicted RBP10.12□□□□□ -0.79
ERBB3-219ENST00000551242 FCGR3BO75015 233 aa10.11□□□□□ -0.79
ERBB3-219ENST00000551242 P04436 131 aa10.11□□□□□ -0.79
ERBB3-219ENST00000551242 GRPP07492 148 aa10.11□□□□□ -0.79
ERBB3-219ENST00000551242 OR10J4P0C629 311 aa10.11□□□□□ -0.79
ERBB3-219ENST00000551242 RHOGP84095 191 aa10.11□□□□□ -0.79
ERBB3-219ENST00000551242 TBR1Q16650 682 aa10.11□□□□□ -0.79
ERBB3-219ENST00000551242 ZNF331Q9NQX6 463 aaPredicted RBP10.11□□□□□ -0.79
ERBB3-219ENST00000551242 OSTCQ9NRP0 149 aa10.11□□□□□ -0.79
ERBB3-219ENST00000551242 SELENOKQ9Y6D0 94 aa10.11□□□□□ -0.79
ERBB3-219ENST00000551242 MUC21A0A0G2JKD1 596 aa10.11□□□□□ -0.79
ERBB3-219ENST00000551242 MUC21A0A140T8X8 626 aa10.11□□□□□ -0.79
ERBB3-219ENST00000551242 C2orf70A6NJV1 201 aa10.11□□□□□ -0.79
ERBB3-219ENST00000551242 WNT9BO14905 357 aa10.11□□□□□ -0.79
ERBB3-219ENST00000551242 GFRA3O60609 400 aa10.11□□□□□ -0.79
ERBB3-219ENST00000551242 MT-CO2P00403 227 aa10.11□□□□□ -0.79
ERBB3-219ENST00000551242 LINC00869P0C866 280 aa10.11□□□□□ -0.79
ERBB3-219ENST00000551242 GDF1P27539 372 aa10.11□□□□□ -0.79
ERBB3-219ENST00000551242 MUC21Q5SSG8 566 aa10.11□□□□□ -0.79
ERBB3-219ENST00000551242 GDF5OSQ5U4N7 250 aa10.11□□□□□ -0.79
ERBB3-219ENST00000551242 CXorf67Q86X51 503 aaPredicted RBP10.11□□□□□ -0.79
ERBB3-219ENST00000551242 OR8B3Q8NGG8 313 aa10.11□□□□□ -0.79
ERBB3-219ENST00000551242 OR4A16Q8NH70 328 aa10.11□□□□□ -0.79
ERBB3-219ENST00000551242 BCL2L2Q92843 193 aaPredicted RBP10.11□□□□□ -0.79
ERBB3-219ENST00000551242 OR8B2Q96RD0 313 aa10.11□□□□□ -0.79
ERBB3-219ENST00000551242 CSTL1Q9H114 145 aa10.11□□□□□ -0.79
ERBB3-219ENST00000551242 CACNA1EQ15878 2313 aa10.1□□□□□ -0.79
ERBB3-219ENST00000551242 LOC102723996A0A087X1L8 192 aa10.1□□□□□ -0.79
ERBB3-219ENST00000551242 SMIM27A0A1W2PRY6 76 aa10.1□□□□□ -0.79
ERBB3-219ENST00000551242 hDV102S1A0JD36 115 aa10.1□□□□□ -0.79
ERBB3-219ENST00000551242 HAND1O96004 215 aa10.1□□□□□ -0.79
ERBB3-219ENST00000551242 IGLV2-8P01709 118 aa10.1□□□□□ -0.79
ERBB3-219ENST00000551242 IGHV3-13P01766 116 aa10.1□□□□□ -0.79
ERBB3-219ENST00000551242 IGHV3-7P01780 117 aa10.1□□□□□ -0.79
ERBB3-219ENST00000551242 ERVK11-1P61568 191 aa10.1□□□□□ -0.79
ERBB3-219ENST00000551242 Q8TCH9 128 aa10.1□□□□□ -0.79
ERBB3-219ENST00000551242 FAM216AQ8WUB2 273 aa10.1□□□□□ -0.79
ERBB3-219ENST00000551242 CDX2Q99626 313 aaPredicted RBP10.1□□□□□ -0.79
ERBB3-219ENST00000551242 LSM4Q9Y4Z0 139 aaKnown RBP10.1□□□□□ -0.79
ERBB3-219ENST00000551242 TNCP24821 2201 aa10.1□□□□□ -0.79
ERBB3-219ENST00000551242 TMEM30CPA0ZSE6 113 aa10.1□□□□□ -0.79
ERBB3-219ENST00000551242 PINLYPA6NC86 204 aa10.1□□□□□ -0.79
ERBB3-219ENST00000551242 WISP2O76076 250 aa10.1□□□□□ -0.79
ERBB3-219ENST00000551242 IGFBP2P18065 325 aa10.1□□□□□ -0.79
ERBB3-219ENST00000551242 GATA2P23769 480 aaPredicted RBP10.1□□□□□ -0.79
ERBB3-219ENST00000551242 NPY1RP25929 384 aa10.1□□□□□ -0.79
ERBB3-219ENST00000551242 VDAC2P45880 294 aaPredicted RBP10.1□□□□□ -0.79
ERBB3-219ENST00000551242 MFAP2P55001 183 aa10.1□□□□□ -0.79
ERBB3-219ENST00000551242 PLP2Q04941 152 aa10.1□□□□□ -0.79
ERBB3-219ENST00000551242 FOXF2Q12947 444 aa10.1□□□□□ -0.79
ERBB3-219ENST00000551242 ALKBH6Q3KRA9 238 aa10.1□□□□□ -0.79
ERBB3-219ENST00000551242 Q6ZR03 302 aa10.1□□□□□ -0.79
ERBB3-219ENST00000551242 TMEM45BQ96B21 275 aa10.1□□□□□ -0.79
ERBB3-219ENST00000551242 LINC00479Q96M42 142 aa10.1□□□□□ -0.79
ERBB3-219ENST00000551242 HSD17B10Q99714 261 aaKnown RBP10.1□□□□□ -0.79
ERBB3-219ENST00000551242 DCTN5Q9BTE1 182 aa10.1□□□□□ -0.79
ERBB3-219ENST00000551242 NPVFQ9HCQ7 196 aa10.1□□□□□ -0.79
ERBB3-219ENST00000551242 TNFRSF19Q9NS68 423 aa10.1□□□□□ -0.79
ERBB3-219ENST00000551242 IL19Q9UHD0 177 aa10.1□□□□□ -0.79
ERBB3-219ENST00000551242 PRR14LQ5THK1 2151 aa10.09□□□□□ -0.79
ERBB3-219ENST00000551242 GGTLC3B5MD39 225 aa10.09□□□□□ -0.79
ERBB3-219ENST00000551242 ISLRO14498 428 aa10.09□□□□□ -0.79
ERBB3-219ENST00000551242 SRFP11831 508 aa10.09□□□□□ -0.79
ERBB3-219ENST00000551242 AREGP15514 252 aa10.09□□□□□ -0.79
ERBB3-219ENST00000551242 NRN1LQ496H8 165 aa10.09□□□□□ -0.79
ERBB3-219ENST00000551242 FAM214BQ7L5A3 538 aa10.09□□□□□ -0.79
ERBB3-219ENST00000551242 MRPL27Q9P0M9 148 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms