RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 TRABDQ9H4I3 376 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 SDHAF2Q9NX18 166 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 TAS2R1Q9NYW7 299 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 CHCHD2Q9Y6H1 151 aaPredicted RBP2.55□□□□□ -2
LIMA1-205ENST00000550592 DNAH9Q9NYC9 4486 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 CSMD3Q7Z407 3707 aa2.54□□□□□ -2
LIMA1-205ENST00000550592 IGKV3D-11A0A0A0MRZ8 115 aa2.54□□□□□ -2
LIMA1-205ENST00000550592 GMNCA6NCL1 334 aa2.54□□□□□ -2
LIMA1-205ENST00000550592 CCDC160A6NGH7 325 aa2.54□□□□□ -2
LIMA1-205ENST00000550592 PSMD12O00232 456 aaPredicted RBP2.54□□□□□ -2
LIMA1-205ENST00000550592 TCAPO15273 167 aa2.54□□□□□ -2
LIMA1-205ENST00000550592 DCTN3O75935 186 aa2.54□□□□□ -2
LIMA1-205ENST00000550592 RNASE2P10153 161 aaKnown RBP2.54□□□□□ -2
LIMA1-205ENST00000550592 MLNP12872 115 aa2.54□□□□□ -2
LIMA1-205ENST00000550592 NQO1P15559 274 aaKnown RBP2.54□□□□□ -2
LIMA1-205ENST00000550592 ZNF708P17019 499 aa2.54□□□□□ -2
LIMA1-205ENST00000550592 S100PP25815 95 aa2.54□□□□□ -2
LIMA1-205ENST00000550592 CASP1P29466 404 aa2.54□□□□□ -2
LIMA1-205ENST00000550592 SERPINB1P30740 379 aa2.54□□□□□ -2
LIMA1-205ENST00000550592 TGFBR1P36897 503 aa2.54□□□□□ -2
LIMA1-205ENST00000550592 IDH3GP51553 393 aaPredicted RBP2.54□□□□□ -2
LIMA1-205ENST00000550592 KRR1Q13601 381 aaKnown RBP2.54□□□□□ -2
LIMA1-205ENST00000550592 GUSBP1Q15486 140 aa2.54□□□□□ -2
LIMA1-205ENST00000550592 TNFAIP8L3Q5GJ75 292 aa2.54□□□□□ -2
LIMA1-205ENST00000550592 IDNKQ5T6J7 187 aa2.54□□□□□ -2
LIMA1-205ENST00000550592 ZNF470Q6ECI4 717 aa2.54□□□□□ -2
LIMA1-205ENST00000550592 TTC33Q6PID6 262 aaPredicted RBP2.54□□□□□ -2
LIMA1-205ENST00000550592 FAM231DQ6ZW35 169 aa2.54□□□□□ -2
LIMA1-205ENST00000550592 KRTAP5-2Q701N4 177 aa2.54□□□□□ -2
LIMA1-205ENST00000550592 DCXRQ7Z4W1 244 aa2.54□□□□□ -2
LIMA1-205ENST00000550592 FAM19A1Q7Z5A9 133 aa2.54□□□□□ -2
LIMA1-205ENST00000550592 DPPA2Q7Z7J5 298 aa2.54□□□□□ -2
LIMA1-205ENST00000550592 GAPTQ8N292 157 aa2.54□□□□□ -2
LIMA1-205ENST00000550592 MORN4Q8NDC4 146 aa2.54□□□□□ -2
LIMA1-205ENST00000550592 YIPF6Q96EC8 236 aa2.54□□□□□ -2
LIMA1-205ENST00000550592 ADTRPQ96IZ2 230 aa2.54□□□□□ -2
LIMA1-205ENST00000550592 KIFC1Q9BW19 673 aa2.54□□□□□ -2
LIMA1-205ENST00000550592 CCDC90BQ9GZT6 254 aa2.54□□□□□ -2
LIMA1-205ENST00000550592 HDHD2Q9H0R4 259 aa2.54□□□□□ -2
LIMA1-205ENST00000550592 RNF122Q9H9V4 155 aa2.54□□□□□ -2
LIMA1-205ENST00000550592 ACOT13Q9NPJ3 140 aa2.54□□□□□ -2
LIMA1-205ENST00000550592 PARP11Q9NR21 331 aa2.54□□□□□ -2
LIMA1-205ENST00000550592 NKIRAS1Q9NYS0 192 aa2.54□□□□□ -2
LIMA1-205ENST00000550592 ANXA10Q9UJ72 324 aa2.54□□□□□ -2
LIMA1-205ENST00000550592 MMACHCQ9Y4U1 282 aa2.54□□□□□ -2
LIMA1-205ENST00000550592 E5RI56 91 aa2.53□□□□□ -2
LIMA1-205ENST00000550592 hCG_2039718K7EN88 272 aa2.53□□□□□ -2
LIMA1-205ENST00000550592 GPR171O14626 319 aa2.53□□□□□ -2
LIMA1-205ENST00000550592 ACOX3O15254 700 aa2.53□□□□□ -2
LIMA1-205ENST00000550592 AHSA1O95433 338 aa2.53□□□□□ -2
LIMA1-205ENST00000550592 OR4E1P0C645 316 aa2.53□□□□□ -2
LIMA1-205ENST00000550592 SEC11BP0C7V7 166 aa2.53□□□□□ -2
LIMA1-205ENST00000550592 COX4I1P13073 169 aa2.53□□□□□ -2
LIMA1-205ENST00000550592 G0S2P27469 103 aa2.53□□□□□ -2
LIMA1-205ENST00000550592 HLA-DMAP28067 261 aa2.53□□□□□ -2
LIMA1-205ENST00000550592 RCVRNP35243 200 aa2.53□□□□□ -2
LIMA1-205ENST00000550592 RPA3P35244 121 aaPredicted RBP2.53□□□□□ -2
LIMA1-205ENST00000550592 GNG10P50151 68 aa2.53□□□□□ -2
LIMA1-205ENST00000550592 C18orf21Q32NC0 220 aaPredicted RBP2.53□□□□□ -2
LIMA1-205ENST00000550592 ACTL10Q5JWF8 245 aa2.53□□□□□ -2
LIMA1-205ENST00000550592 TMEM69Q5SWH9 247 aa2.53□□□□□ -2
LIMA1-205ENST00000550592 C5orf46Q6UWT4 87 aa2.53□□□□□ -2
LIMA1-205ENST00000550592 SMIM15Q7Z3B0 74 aa2.53□□□□□ -2
LIMA1-205ENST00000550592 DAZ4Q86SG3 579 aaKnown RBP2.53□□□□□ -2
LIMA1-205ENST00000550592 PRNTQ86SH4 94 aa2.53□□□□□ -2
LIMA1-205ENST00000550592 TMEM86BQ8N661 226 aa2.53□□□□□ -2
LIMA1-205ENST00000550592 WFDC9Q8NEX5 89 aa2.53□□□□□ -2
LIMA1-205ENST00000550592 OR1P1Q8NH06 330 aa2.53□□□□□ -2
LIMA1-205ENST00000550592 JOSD2Q8TAC2 188 aa2.53□□□□□ -2
LIMA1-205ENST00000550592 LRRC20Q8TCA0 184 aa2.53□□□□□ -2
LIMA1-205ENST00000550592 DOK4Q8TEW6 326 aa2.53□□□□□ -2
LIMA1-205ENST00000550592 MAFIPQ8WZ33 124 aa2.53□□□□□ -2
LIMA1-205ENST00000550592 TNFRSF14Q92956 283 aa2.53□□□□□ -2
LIMA1-205ENST00000550592 TAMM41Q96BW9 452 aa2.53□□□□□ -2
LIMA1-205ENST00000550592 BIRC8Q96P09 236 aa2.53□□□□□ -2
LIMA1-205ENST00000550592 TRIB3Q96RU7 358 aa2.53□□□□□ -2
LIMA1-205ENST00000550592 HBEGFQ99075 208 aa2.53□□□□□ -2
LIMA1-205ENST00000550592 C12orf57Q99622 126 aa2.53□□□□□ -2
LIMA1-205ENST00000550592 EBNA1BP2Q99848 306 aaKnown RBP2.53□□□□□ -2
LIMA1-205ENST00000550592 HINT2Q9BX68 163 aa2.53□□□□□ -2
LIMA1-205ENST00000550592 KRTAP4-3Q9BYR4 195 aa2.53□□□□□ -2
LIMA1-205ENST00000550592 METTL8Q9H825 291 aaKnown RBP2.53□□□□□ -2
LIMA1-205ENST00000550592 ABCB9Q9NP78 766 aa2.53□□□□□ -2
LIMA1-205ENST00000550592 DAZ1Q9NQZ3 744 aaKnown RBP2.53□□□□□ -2
LIMA1-205ENST00000550592 FGFR1OP2Q9NVK5 253 aa2.53□□□□□ -2
LIMA1-205ENST00000550592 RBMX2Q9Y388 322 aaKnown RBP2.53□□□□□ -2
LIMA1-205ENST00000550592 SLC22A7Q9Y694 548 aa2.53□□□□□ -2
LIMA1-205ENST00000550592 FRAS1Q86XX4 4008 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 KIR2DS1A0A191URI9 304 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 GNG14A0A1W2PPG7 69 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 ZNF860A6NHJ4 632 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 SIGLEC16A6NMB1 481 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 OR2AT4A6NND4 320 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 FSTL3O95633 263 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 LY6G6CO95867 125 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 HLA-DQB2P05538 268 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 RBP1P09455 135 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 OR5AC1P0C628 307 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 TAC1P20366 129 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 RPL5P46777 297 aaKnown RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms