RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 EXOC1LA0A1B0GW35 172 aa1.93□□□□□ -2.1
SNRPF-202ENST00000549580 E5RI56 91 aa1.93□□□□□ -2.1
SNRPF-202ENST00000549580 C3orf84H3BNL1 204 aa1.93□□□□□ -2.1
SNRPF-202ENST00000549580 ZNF189O75820 626 aaPredicted RBP1.93□□□□□ -2.1
SNRPF-202ENST00000549580 OR5F1O95221 314 aa1.93□□□□□ -2.1
SNRPF-202ENST00000549580 C1QAP02745 245 aa1.93□□□□□ -2.1
SNRPF-202ENST00000549580 SERPINE1P05121 402 aa1.93□□□□□ -2.1
SNRPF-202ENST00000549580 BPGMP07738 259 aa1.93□□□□□ -2.1
SNRPF-202ENST00000549580 HIST1H2BOP23527 126 aa1.93□□□□□ -2.1
SNRPF-202ENST00000549580 PSMB8P28062 276 aa1.93□□□□□ -2.1
SNRPF-202ENST00000549580 HIST1H2BBP33778 126 aa1.93□□□□□ -2.1
SNRPF-202ENST00000549580 SERPINB9P50453 376 aa1.93□□□□□ -2.1
SNRPF-202ENST00000549580 HIST1H2BDP58876 126 aa1.93□□□□□ -2.1
SNRPF-202ENST00000549580 DEFA1P59665 94 aa1.93□□□□□ -2.1
SNRPF-202ENST00000549580 HIST1H4AP62805 103 aaKnown RBP1.93□□□□□ -2.1
SNRPF-202ENST00000549580 HIST1H2BCP62807 126 aa1.93□□□□□ -2.1
SNRPF-202ENST00000549580 HIST2H2BEQ16778 126 aa1.93□□□□□ -2.1
SNRPF-202ENST00000549580 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.93□□□□□ -2.1
SNRPF-202ENST00000549580 RPL22L1Q6P5R6 122 aaKnown RBP1.93□□□□□ -2.1
SNRPF-202ENST00000549580 ZNF705AQ6ZN79 300 aaPredicted RBP1.93□□□□□ -2.1
SNRPF-202ENST00000549580 OR52L1Q8NGH7 329 aa1.93□□□□□ -2.1
SNRPF-202ENST00000549580 OR5J2Q8NH18 312 aa1.93□□□□□ -2.1
SNRPF-202ENST00000549580 HIST1H2BHQ93079 126 aa1.93□□□□□ -2.1
SNRPF-202ENST00000549580 MRPS24Q96EL2 167 aaKnown RBP1.93□□□□□ -2.1
SNRPF-202ENST00000549580 IMMP2LQ96T52 175 aa1.93□□□□□ -2.1
SNRPF-202ENST00000549580 HIST1H2BNQ99877 126 aa1.93□□□□□ -2.1
SNRPF-202ENST00000549580 HIST1H2BMQ99879 126 aa1.93□□□□□ -2.1
SNRPF-202ENST00000549580 RNASE7Q9H1E1 156 aaKnown RBP1.93□□□□□ -2.1
SNRPF-202ENST00000549580 C11orf68Q9H3H3 251 aaKnown RBP1.93□□□□□ -2.1
SNRPF-202ENST00000549580 UQCC1Q9NVA1 299 aa1.93□□□□□ -2.1
SNRPF-202ENST00000549580 ARMC1Q9NVT9 282 aa1.93□□□□□ -2.1
SNRPF-202ENST00000549580 IL36BQ9NZH7 164 aa1.93□□□□□ -2.1
SNRPF-202ENST00000549580 OPTCQ9UBM4 332 aa1.93□□□□□ -2.1
SNRPF-202ENST00000549580 RTL1A6NKG5 1358 aa1.93□□□□□ -2.1
SNRPF-202ENST00000549580 TRAV9-1A0A075B6T8 112 aa1.92□□□□□ -2.1
SNRPF-202ENST00000549580 GGT3PA6NGU5 568 aa1.92□□□□□ -2.1
SNRPF-202ENST00000549580 KLRC4O43908 158 aa1.92□□□□□ -2.1
SNRPF-202ENST00000549580 RBP1P09455 135 aa1.92□□□□□ -2.1
SNRPF-202ENST00000549580 TFPTP0C1Z6 253 aa1.92□□□□□ -2.1
SNRPF-202ENST00000549580 CBR1P16152 277 aa1.92□□□□□ -2.1
SNRPF-202ENST00000549580 MSNP26038 577 aaKnown RBP1.92□□□□□ -2.1
SNRPF-202ENST00000549580 ALDH3A1P30838 453 aa1.92□□□□□ -2.1
SNRPF-202ENST00000549580 RPL19P84098 196 aaKnown RBP1.92□□□□□ -2.1
SNRPF-202ENST00000549580 MEF2BQ02080 365 aaPredicted RBP1.92□□□□□ -2.1
SNRPF-202ENST00000549580 RPL18Q07020 188 aaKnown RBP1.92□□□□□ -2.1
SNRPF-202ENST00000549580 PABPC1L2AQ5JQF8 200 aa1.92□□□□□ -2.1
SNRPF-202ENST00000549580 DHRS4L2Q6PKH6 230 aa1.92□□□□□ -2.1
SNRPF-202ENST00000549580 AGTRAPQ6RW13 159 aa1.92□□□□□ -2.1
SNRPF-202ENST00000549580 ZNF767PQ75MW2 155 aa1.92□□□□□ -2.1
SNRPF-202ENST00000549580 SLC35E3Q7Z769 313 aa1.92□□□□□ -2.1
SNRPF-202ENST00000549580 TMED4Q7Z7H5 227 aa1.92□□□□□ -2.1
SNRPF-202ENST00000549580 STX12Q86Y82 276 aa1.92□□□□□ -2.1
SNRPF-202ENST00000549580 OR13C4Q8NGS5 318 aa1.92□□□□□ -2.1
SNRPF-202ENST00000549580 PHOSPHO2Q8TCD6 241 aa1.92□□□□□ -2.1
SNRPF-202ENST00000549580 GNPDA2Q8TDQ7 276 aa1.92□□□□□ -2.1
SNRPF-202ENST00000549580 TOMM6Q96B49 74 aa1.92□□□□□ -2.1
SNRPF-202ENST00000549580 C20orf27Q9GZN8 174 aa1.92□□□□□ -2.1
SNRPF-202ENST00000549580 NDUFB11Q9NX14 153 aa1.92□□□□□ -2.1
SNRPF-202ENST00000549580 CRCT1Q9UGL9 99 aa1.92□□□□□ -2.1
SNRPF-202ENST00000549580 RBM7Q9Y580 266 aaKnown RBP1.92□□□□□ -2.1
SNRPF-202ENST00000549580 TIMM9Q9Y5J7 89 aa1.92□□□□□ -2.1
SNRPF-202ENST00000549580 RALGAPA2Q2PPJ7 1873 aa1.92□□□□□ -2.1
SNRPF-202ENST00000549580 NYNRINQ9P2P1 1898 aaKnown RBP1.91□□□□□ -2.1
SNRPF-202ENST00000549580 hCG_1818297A0A087WSY0 165 aa1.91□□□□□ -2.1
SNRPF-202ENST00000549580 MUC21A0A0G2JKD1 596 aa1.91□□□□□ -2.1
SNRPF-202ENST00000549580 MUC21A0A140T8X8 626 aa1.91□□□□□ -2.1
SNRPF-202ENST00000549580 DPRXA6NFQ7 191 aa1.91□□□□□ -2.1
SNRPF-202ENST00000549580 FAM159BA6NKW6 160 aa1.91□□□□□ -2.1
SNRPF-202ENST00000549580 A8MT66 165 aa1.91□□□□□ -2.1
SNRPF-202ENST00000549580 H3BT86 120 aa1.91□□□□□ -2.1
SNRPF-202ENST00000549580 IFNA10P01566 189 aa1.91□□□□□ -2.1
SNRPF-202ENST00000549580 C8GP07360 202 aa1.91□□□□□ -2.1
SNRPF-202ENST00000549580 MSMBP08118 114 aa1.91□□□□□ -2.1
SNRPF-202ENST00000549580 SMIM10L2AP0DMW4 78 aa1.91□□□□□ -2.1
SNRPF-202ENST00000549580 SMIM10L2BP0DMW5 78 aa1.91□□□□□ -2.1
SNRPF-202ENST00000549580 CCL5P13501 91 aa1.91□□□□□ -2.1
SNRPF-202ENST00000549580 HLA-DMBP28068 263 aa1.91□□□□□ -2.1
SNRPF-202ENST00000549580 EMP1P54849 157 aa1.91□□□□□ -2.1
SNRPF-202ENST00000549580 TPI1P60174 286 aa1.91□□□□□ -2.1
SNRPF-202ENST00000549580 C12orf74Q32Q52 190 aa1.91□□□□□ -2.1
SNRPF-202ENST00000549580 IBA57Q5T440 356 aaKnown RBP1.91□□□□□ -2.1
SNRPF-202ENST00000549580 C9orf64Q5T6V5 341 aa1.91□□□□□ -2.1
SNRPF-202ENST00000549580 AADACL3Q5VUY0 350 aa1.91□□□□□ -2.1
SNRPF-202ENST00000549580 LYZL1Q6UWQ5 148 aa1.91□□□□□ -2.1
SNRPF-202ENST00000549580 SLC36A1Q7Z2H8 476 aa1.91□□□□□ -2.1
SNRPF-202ENST00000549580 NAT8Q9UHE5 227 aa1.91□□□□□ -2.1
SNRPF-202ENST00000549580 HHLA3Q9XRX5 114 aa1.91□□□□□ -2.1
SNRPF-202ENST00000549580 ZNF532Q9HCE3 1301 aa1.91□□□□□ -2.1
SNRPF-202ENST00000549580 DOCK5Q9H7D0 1870 aa1.9□□□□□ -2.1
SNRPF-202ENST00000549580 DOCK6Q96HP0 2047 aa1.9□□□□□ -2.11
SNRPF-202ENST00000549580 EIF3AQ14152 1382 aaKnown RBP1.9□□□□□ -2.11
SNRPF-202ENST00000549580 ROBO3Q96MS0 1386 aa1.9□□□□□ -2.11
SNRPF-202ENST00000549580 IRGMA1A4Y4 181 aa1.9□□□□□ -2.11
SNRPF-202ENST00000549580 FABP5P3A8MUU1 101 aa1.9□□□□□ -2.11
SNRPF-202ENST00000549580 TMEM238C9JI98 176 aa1.9□□□□□ -2.11
SNRPF-202ENST00000549580 FNDC10F2Z333 226 aa1.9□□□□□ -2.11
SNRPF-202ENST00000549580 IGHV3-7P01780 117 aa1.9□□□□□ -2.11
SNRPF-202ENST00000549580 SULT1A3P0DMM9 295 aa1.9□□□□□ -2.11
SNRPF-202ENST00000549580 SULT1A4P0DMN0 295 aa1.9□□□□□ -2.11
SNRPF-202ENST00000549580 PPIBP23284 216 aaKnown RBP1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms