RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 RLN2P04090 185 aa6.44□□□□□ -1.38
DEPDC4-207ENST00000549249 FBP1P09467 338 aa6.44□□□□□ -1.38
DEPDC4-207ENST00000549249 TMEM11P17152 192 aa6.44□□□□□ -1.38
DEPDC4-207ENST00000549249 BRS3P32247 399 aa6.44□□□□□ -1.38
DEPDC4-207ENST00000549249 VDAC2P45880 294 aaPredicted RBP6.44□□□□□ -1.38
DEPDC4-207ENST00000549249 P2RY1P47900 373 aa6.44□□□□□ -1.38
DEPDC4-207ENST00000549249 SPCS3P61009 180 aa6.44□□□□□ -1.38
DEPDC4-207ENST00000549249 RPL8P62917 257 aaKnown RBP6.44□□□□□ -1.38
DEPDC4-207ENST00000549249 PRSS8Q16651 343 aa6.44□□□□□ -1.38
DEPDC4-207ENST00000549249 DEFB112Q30KQ8 113 aa6.44□□□□□ -1.38
DEPDC4-207ENST00000549249 C9orf139Q6ZV77 190 aa6.44□□□□□ -1.38
DEPDC4-207ENST00000549249 IL17RELQ6ZVW7 336 aa6.44□□□□□ -1.38
DEPDC4-207ENST00000549249 Q8N9W7 124 aa6.44□□□□□ -1.38
DEPDC4-207ENST00000549249 OR52E5Q8NH55 327 aa6.44□□□□□ -1.38
DEPDC4-207ENST00000549249 VSTM2AQ8TAG5 236 aa6.44□□□□□ -1.38
DEPDC4-207ENST00000549249 NANPQ8TBE9 248 aa6.44□□□□□ -1.38
DEPDC4-207ENST00000549249 AQP10Q96PS8 301 aa6.44□□□□□ -1.38
DEPDC4-207ENST00000549249 SSX3Q99909 188 aa6.44□□□□□ -1.38
DEPDC4-207ENST00000549249 MFFQ9GZY8 342 aa6.44□□□□□ -1.38
DEPDC4-207ENST00000549249 ZFP57Q9NU63 452 aa6.44□□□□□ -1.38
DEPDC4-207ENST00000549249 METTL1Q9UBP6 276 aaKnown RBP6.44□□□□□ -1.38
DEPDC4-207ENST00000549249 PRNDQ9UKY0 176 aa6.44□□□□□ -1.38
DEPDC4-207ENST00000549249 ZNF257Q9Y2Q1 563 aa6.44□□□□□ -1.38
DEPDC4-207ENST00000549249 HSPB11Q9Y547 144 aa6.44□□□□□ -1.38
DEPDC4-207ENST00000549249 OR51B2Q9Y5P1 312 aa6.44□□□□□ -1.38
DEPDC4-207ENST00000549249 FLNAP21333 2647 aaKnown RBP6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 C15orf62A8K5M9 175 aa6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 H3BUX3 64 aa6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 L7N2F9 121 aa6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 FCN1O00602 326 aa6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 MED6O75586 246 aa6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 IFNA17P01571 189 aa6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 OPN1MWP04001 364 aa6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 FGF2P09038 288 aa6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 OPN1MW2P0DN77 364 aa6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 OPN1MW3P0DN78 364 aa6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 RPL12P30050 165 aaKnown RBP6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 AP2S1P53680 142 aaPredicted RBP6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 BPIFB3P59826 476 aa6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 HSPE1P61604 102 aaKnown RBP6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 PRCDQ00LT1 54 aa6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 OR2F1Q13607 317 aa6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 ZNF345Q14585 488 aa6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 C5orf64Q2M2E5 130 aa6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 LRRC75BQ2VPJ9 315 aa6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 ACOT7LQ6ZUV0 252 aa6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 Q71RC1 249 aaPredicted RBP6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 TMUB2Q71RG4 321 aa6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 HAPLN4Q86UW8 402 aa6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 PPP1R27Q86WC6 154 aa6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 KCNRGQ8N5I3 272 aa6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 OR5B3Q8NH48 314 aa6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 DTD1Q8TEA8 209 aa6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 C22orf15Q8WYQ4 148 aa6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 SMIM8Q96KF7 97 aa6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 ZNF48Q96MX3 618 aaPredicted RBP6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 OR4C12Q96R67 309 aa6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 RAB40CQ96S21 281 aa6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 CLCC1Q96S66 551 aa6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 SMR3AQ99954 134 aa6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 NDUFA4L2Q9NRX3 87 aa6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 LYRM2Q9NU23 88 aaPredicted RBP6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 PSENENQ9NZ42 101 aa6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 RNF114Q9Y508 228 aa6.43□□□□□ -1.38
DEPDC4-207ENST00000549249 A6NDX4 124 aa6.42□□□□□ -1.38
DEPDC4-207ENST00000549249 CEBPZOSA8MTT3 80 aa6.42□□□□□ -1.38
DEPDC4-207ENST00000549249 TEX22C9J3V5 150 aa6.42□□□□□ -1.38
DEPDC4-207ENST00000549249 GPR137BO60478 399 aa6.42□□□□□ -1.38
DEPDC4-207ENST00000549249 TSC22D2O75157 780 aa6.42□□□□□ -1.38
DEPDC4-207ENST00000549249 LY6G6DO95868 133 aa6.42□□□□□ -1.38
DEPDC4-207ENST00000549249 CA2P00918 260 aa6.42□□□□□ -1.38
DEPDC4-207ENST00000549249 FAM106CPP0CH98 169 aa6.42□□□□□ -1.38
DEPDC4-207ENST00000549249 PVALBP20472 110 aaPredicted RBP6.42□□□□□ -1.38
DEPDC4-207ENST00000549249 HOXA1P49639 335 aaPredicted RBP6.42□□□□□ -1.38
DEPDC4-207ENST00000549249 TAS2R30P59541 319 aa6.42□□□□□ -1.38
DEPDC4-207ENST00000549249 VAMP2P63027 116 aa6.42□□□□□ -1.38
DEPDC4-207ENST00000549249 NDPQ00604 133 aa6.42□□□□□ -1.38
DEPDC4-207ENST00000549249 EWSR1Q01844 656 aaKnown RBP eCLIP6.42□□□□□ -1.38
DEPDC4-207ENST00000549249 NHLH2Q02577 135 aa6.42□□□□□ -1.38
DEPDC4-207ENST00000549249 ARL16Q0P5N6 197 aa6.42□□□□□ -1.38
DEPDC4-207ENST00000549249 TMEM267Q0VDI3 215 aaPredicted RBP6.42□□□□□ -1.38
DEPDC4-207ENST00000549249 TNXAQ16473 311 aa6.42□□□□□ -1.38
DEPDC4-207ENST00000549249 TMEM14EPQ6UXP3 125 aa6.42□□□□□ -1.38
DEPDC4-207ENST00000549249 TMEM219Q86XT9 240 aa6.42□□□□□ -1.38
DEPDC4-207ENST00000549249 MMD2Q8IY49 270 aa6.42□□□□□ -1.38
DEPDC4-207ENST00000549249 OR2C3Q8N628 320 aa6.42□□□□□ -1.38
DEPDC4-207ENST00000549249 TMEM252Q8N6L7 170 aa6.42□□□□□ -1.38
DEPDC4-207ENST00000549249 OR10W1Q8NGF6 305 aa6.42□□□□□ -1.38
DEPDC4-207ENST00000549249 OR1L8Q8NGR8 309 aa6.42□□□□□ -1.38
DEPDC4-207ENST00000549249 TMEM170AQ8WVE7 144 aa6.42□□□□□ -1.38
DEPDC4-207ENST00000549249 ARL6Q9H0F7 186 aa6.42□□□□□ -1.38
DEPDC4-207ENST00000549249 YAE1D1Q9NRH1 226 aa6.42□□□□□ -1.38
DEPDC4-207ENST00000549249 FKBP11Q9NYL4 201 aa6.42□□□□□ -1.38
DEPDC4-207ENST00000549249 KIAA1456Q9P272 454 aa6.42□□□□□ -1.38
DEPDC4-207ENST00000549249 FAM96BQ9Y3D0 163 aa6.42□□□□□ -1.38
DEPDC4-207ENST00000549249 WSB1Q9Y6I7 421 aa6.42□□□□□ -1.38
DEPDC4-207ENST00000549249 HIVEP2P31629 2446 aa6.42□□□□□ -1.38
DEPDC4-207ENST00000549249 A0A0D9SG52 128 aa6.41□□□□□ -1.38
DEPDC4-207ENST00000549249 IGLC7A0M8Q6 106 aa6.41□□□□□ -1.38
DEPDC4-207ENST00000549249 SH2D7A6NKC9 451 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms