RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 ZNF355PQ9NSJ1 428 aa10.6□□□□□ -0.71
PTCH1-217ENST00000548420 IGHV4OR15-8A0A075B7B6 117 aa10.59□□□□□ -0.71
PTCH1-217ENST00000548420 A0A087WW49 117 aa10.59□□□□□ -0.71
PTCH1-217ENST00000548420 TRAV3A0A0B4J244 114 aa10.59□□□□□ -0.71
PTCH1-217ENST00000548420 HMX3A6NHT5 357 aa10.59□□□□□ -0.71
PTCH1-217ENST00000548420 NPIPB5A8MRT5 1133 aa10.59□□□□□ -0.71
PTCH1-217ENST00000548420 ZNF701M0R085 212 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-217ENST00000548420 IGHV3-11P01762 117 aa10.59□□□□□ -0.71
PTCH1-217ENST00000548420 CRYGCP07315 174 aa10.59□□□□□ -0.71
PTCH1-217ENST00000548420 APELAP0DMC3 54 aa10.59□□□□□ -0.71
PTCH1-217ENST00000548420 HLA-GP17693 338 aa10.59□□□□□ -0.71
PTCH1-217ENST00000548420 PTBP1P26599 531 aaKnown RBP eCLIP10.59□□□□□ -0.71
PTCH1-217ENST00000548420 TNFSF8P32971 234 aa10.59□□□□□ -0.71
PTCH1-217ENST00000548420 RPL27AP46776 148 aaKnown RBP10.59□□□□□ -0.71
PTCH1-217ENST00000548420 RND3P61587 244 aa10.59□□□□□ -0.71
PTCH1-217ENST00000548420 ZNF45Q02386 682 aa10.59□□□□□ -0.71
PTCH1-217ENST00000548420 RNASE12Q5GAN4 147 aaKnown RBP10.59□□□□□ -0.71
PTCH1-217ENST00000548420 SLC25A42Q86VD7 318 aa10.59□□□□□ -0.71
PTCH1-217ENST00000548420 OR4D10Q8NGI6 311 aa10.59□□□□□ -0.71
PTCH1-217ENST00000548420 DLX4Q92988 240 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-217ENST00000548420 COA4Q9NYJ1 87 aa10.59□□□□□ -0.71
PTCH1-217ENST00000548420 C13orf42A0A1B0GVH6 325 aa10.58□□□□□ -0.72
PTCH1-217ENST00000548420 GSTZ1O43708 216 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-217ENST00000548420 LPAR6P43657 344 aa10.58□□□□□ -0.72
PTCH1-217ENST00000548420 TAS2R19P59542 299 aa10.58□□□□□ -0.72
PTCH1-217ENST00000548420 PHLDA2Q53GA4 152 aa10.58□□□□□ -0.72
PTCH1-217ENST00000548420 STEAP1BQ6NZ63 245 aa10.58□□□□□ -0.72
PTCH1-217ENST00000548420 TBC1D26Q86UD7 250 aa10.58□□□□□ -0.72
PTCH1-217ENST00000548420 HAPLN4Q86UW8 402 aa10.58□□□□□ -0.72
PTCH1-217ENST00000548420 SGPP2Q8IWX5 399 aa10.58□□□□□ -0.72
PTCH1-217ENST00000548420 TERB2Q8NHR7 220 aa10.58□□□□□ -0.72
PTCH1-217ENST00000548420 MCFD2Q8NI22 146 aa10.58□□□□□ -0.72
PTCH1-217ENST00000548420 ZNF486Q96H40 463 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-217ENST00000548420 C6orf62Q9GZU0 229 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-217ENST00000548420 RANGRFQ9HD47 186 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-217ENST00000548420 TMEM140Q9NV12 185 aa10.58□□□□□ -0.72
PTCH1-217ENST00000548420 ZNF257Q9Y2Q1 563 aa10.58□□□□□ -0.72
PTCH1-217ENST00000548420 CXorf65A6NEN9 183 aa10.57□□□□□ -0.72
PTCH1-217ENST00000548420 FAM223BA6NKX1 122 aa10.57□□□□□ -0.72
PTCH1-217ENST00000548420 MARCH11A6NNE9 402 aa10.57□□□□□ -0.72
PTCH1-217ENST00000548420 OVOL1O14753 267 aa10.57□□□□□ -0.72
PTCH1-217ENST00000548420 MPPED1O15442 326 aa10.57□□□□□ -0.72
PTCH1-217ENST00000548420 RAB3DO95716 219 aa10.57□□□□□ -0.72
PTCH1-217ENST00000548420 MYOD1P15172 320 aa10.57□□□□□ -0.72
PTCH1-217ENST00000548420 CTRB1P17538 263 aa10.57□□□□□ -0.72
PTCH1-217ENST00000548420 SLURP1P55000 103 aa10.57□□□□□ -0.72
PTCH1-217ENST00000548420 OR2B8PP59922 312 aa10.57□□□□□ -0.72
PTCH1-217ENST00000548420 EWSR1Q01844 656 aaKnown RBP eCLIP10.57□□□□□ -0.72
PTCH1-217ENST00000548420 CTRB2Q6GPI1 263 aa10.57□□□□□ -0.72
PTCH1-217ENST00000548420 CEMP1Q6PRD7 247 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-217ENST00000548420 FAM223AQ8IWN6 122 aa10.57□□□□□ -0.72
PTCH1-217ENST00000548420 NECAP1Q8NC96 275 aa10.57□□□□□ -0.72
PTCH1-217ENST00000548420 MRGPRFQ96AM1 343 aa10.57□□□□□ -0.72
PTCH1-217ENST00000548420 FANCD2OSQ96PS1 177 aa10.57□□□□□ -0.72
PTCH1-217ENST00000548420 SRSF8Q9BRL6 282 aaKnown RBP10.57□□□□□ -0.72
PTCH1-217ENST00000548420 HRASLSQ9HDD0 168 aa10.57□□□□□ -0.72
PTCH1-217ENST00000548420 AKIP1Q9NQ31 210 aa10.57□□□□□ -0.72
PTCH1-217ENST00000548420 KRASP01116 189 aa10.56□□□□□ -0.72
PTCH1-217ENST00000548420 IGKV1-39P01597 117 aa10.56□□□□□ -0.72
PTCH1-217ENST00000548420 PRH1P02810 166 aa10.56□□□□□ -0.72
PTCH1-217ENST00000548420 IGKV1D-39P04432 117 aa10.56□□□□□ -0.72
PTCH1-217ENST00000548420 AREGP15514 252 aa10.56□□□□□ -0.72
PTCH1-217ENST00000548420 PSMB6P28072 239 aa10.56□□□□□ -0.72
PTCH1-217ENST00000548420 S100GP29377 79 aa10.56□□□□□ -0.72
PTCH1-217ENST00000548420 RHOGP84095 191 aa10.56□□□□□ -0.72
PTCH1-217ENST00000548420 KLF5Q13887 457 aaPredicted RBP10.56□□□□□ -0.72
PTCH1-217ENST00000548420 IL18Q14116 193 aa10.56□□□□□ -0.72
PTCH1-217ENST00000548420 ACSM6Q6P461 480 aa10.56□□□□□ -0.72
PTCH1-217ENST00000548420 DMBX1Q8NFW5 382 aa10.56□□□□□ -0.72
PTCH1-217ENST00000548420 SEC22AQ96IW7 307 aa10.56□□□□□ -0.72
PTCH1-217ENST00000548420 FYTTD1Q96QD9 318 aaKnown RBP10.56□□□□□ -0.72
PTCH1-217ENST00000548420 PEF1Q9UBV8 284 aaKnown RBP10.56□□□□□ -0.72
PTCH1-217ENST00000548420 RSL24D1Q9UHA3 163 aaKnown RBP10.56□□□□□ -0.72
PTCH1-217ENST00000548420 TEX50A0A1B0GTY4 177 aa10.55□□□□□ -0.72
PTCH1-217ENST00000548420 IGLC7A0M8Q6 106 aa10.55□□□□□ -0.72
PTCH1-217ENST00000548420 ANKRD20A5PA0PJZ0 165 aa10.55□□□□□ -0.72
PTCH1-217ENST00000548420 NUPR2A6NF83 97 aa10.55□□□□□ -0.72
PTCH1-217ENST00000548420 FABP12A6NFH5 140 aa10.55□□□□□ -0.72
PTCH1-217ENST00000548420 ZP3P21754 424 aa10.55□□□□□ -0.72
PTCH1-217ENST00000548420 G6PCP35575 357 aa10.55□□□□□ -0.72
PTCH1-217ENST00000548420 ERVK-16P61578 105 aa10.55□□□□□ -0.72
PTCH1-217ENST00000548420 DEFA5Q01523 94 aa10.55□□□□□ -0.72
PTCH1-217ENST00000548420 MEF2DQ14814 521 aa10.55□□□□□ -0.72
PTCH1-217ENST00000548420 THOC7Q6I9Y2 204 aaKnown RBP10.55□□□□□ -0.72
PTCH1-217ENST00000548420 LINC00322Q6ZN03 302 aaPredicted RBP10.55□□□□□ -0.72
PTCH1-217ENST00000548420 ZNF575Q86XF7 245 aa10.55□□□□□ -0.72
PTCH1-217ENST00000548420 OR6Q1Q8NGQ2 317 aa10.55□□□□□ -0.72
PTCH1-217ENST00000548420 DMRT1Q9Y5R6 373 aa10.55□□□□□ -0.72
PTCH1-217ENST00000548420 APOBP04114 4563 aaKnown RBP10.55□□□□□ -0.72
PTCH1-217ENST00000548420 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.54□□□□□ -0.72
PTCH1-217ENST00000548420 ANKRD34BA5PLL1 514 aa10.54□□□□□ -0.72
PTCH1-217ENST00000548420 TRBV12-3P01733 135 aa10.54□□□□□ -0.72
PTCH1-217ENST00000548420 RPA2P15927 270 aa10.54□□□□□ -0.72
PTCH1-217ENST00000548420 PI3P19957 117 aa10.54□□□□□ -0.72
PTCH1-217ENST00000548420 PIGPP57054 158 aa10.54□□□□□ -0.72
PTCH1-217ENST00000548420 ATP5G2Q06055 141 aa10.54□□□□□ -0.72
PTCH1-217ENST00000548420 C19orf35Q6ZS72 473 aa10.54□□□□□ -0.72
PTCH1-217ENST00000548420 LINC00336Q6ZUF6 198 aa10.54□□□□□ -0.72
PTCH1-217ENST00000548420 OR4C16Q8NGL9 310 aa10.54□□□□□ -0.72
PTCH1-217ENST00000548420 OR1L8Q8NGR8 309 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms