RNA–Protein interactions for RNA: ENST00000548159.5

CNOT2-209, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 1 (best)

Gene CNOT2, Length 2,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-209ENST00000548159 SFRP2Q96HF1 295 aa13.16□□□□□ -0.3
CNOT2-209ENST00000548159 OR51B2Q9Y5P1 312 aa13.16□□□□□ -0.3
CNOT2-209ENST00000548159 ZGRF1Q86YA3 2104 aa13.16□□□□□ -0.3
CNOT2-209ENST00000548159 CT45A6P0DMU7 189 aa13.15□□□□□ -0.3
CNOT2-209ENST00000548159 CT45A5P0DMU8 189 aa13.15□□□□□ -0.3
CNOT2-209ENST00000548159 CT45A7P0DMV0 189 aa13.15□□□□□ -0.3
CNOT2-209ENST00000548159 GATA2P23769 480 aaPredicted RBP13.15□□□□□ -0.3
CNOT2-209ENST00000548159 GCHFRP30047 84 aa13.15□□□□□ -0.3
CNOT2-209ENST00000548159 RPL31P62899 125 aaKnown RBP13.15□□□□□ -0.3
CNOT2-209ENST00000548159 KCNIP4Q6PIL6 250 aa13.15□□□□□ -0.3
CNOT2-209ENST00000548159 TMEM144Q7Z5S9 345 aa13.15□□□□□ -0.3
CNOT2-209ENST00000548159 CISD2Q8N5K1 135 aaKnown RBP13.15□□□□□ -0.3
CNOT2-209ENST00000548159 OR4P4Q8NGL7 312 aa13.15□□□□□ -0.3
CNOT2-209ENST00000548159 IGKV1OR2-108A0A075B7D4 117 aa13.15□□□□□ -0.3
CNOT2-209ENST00000548159 F6UZH7 168 aa13.15□□□□□ -0.3
CNOT2-209ENST00000548159 ITGB1BP1O14713 200 aa13.15□□□□□ -0.3
CNOT2-209ENST00000548159 TM4SF5O14894 197 aa13.15□□□□□ -0.3
CNOT2-209ENST00000548159 RPL15P61313 204 aaKnown RBP13.15□□□□□ -0.3
CNOT2-209ENST00000548159 JOSD1Q15040 202 aaPredicted RBP13.15□□□□□ -0.3
CNOT2-209ENST00000548159 ZNF788Q6ZQV5 615 aa13.15□□□□□ -0.3
CNOT2-209ENST00000548159 Q6ZS92 163 aa13.15□□□□□ -0.3
CNOT2-209ENST00000548159 LURAP1LQ8IV03 231 aa13.15□□□□□ -0.3
CNOT2-209ENST00000548159 ZMAT5Q9UDW3 170 aaKnown RBP13.15□□□□□ -0.3
CNOT2-209ENST00000548159 IL19Q9UHD0 177 aa13.15□□□□□ -0.3
CNOT2-209ENST00000548159 CD40P25942 277 aa13.14□□□□□ -0.31
CNOT2-209ENST00000548159 IGFL3Q6UXB1 125 aa13.14□□□□□ -0.31
CNOT2-209ENST00000548159 MIR17HGQ75NE6 70 aa13.14□□□□□ -0.31
CNOT2-209ENST00000548159 RBMXL3Q8N7X1 1067 aaKnown RBP13.14□□□□□ -0.31
CNOT2-209ENST00000548159 FAM216AQ8WUB2 273 aa13.14□□□□□ -0.31
CNOT2-209ENST00000548159 ENY2Q9NPA8 101 aa13.14□□□□□ -0.31
CNOT2-209ENST00000548159 CUL9Q8IWT3 2517 aa13.14□□□□□ -0.31
CNOT2-209ENST00000548159 J3QR06 171 aa13.14□□□□□ -0.31
CNOT2-209ENST00000548159 DEFA6Q01524 100 aa13.14□□□□□ -0.31
CNOT2-209ENST00000548159 HLA-DRB5Q30154 266 aa13.14□□□□□ -0.31
CNOT2-209ENST00000548159 C14orf144Q96I85 54 aa13.14□□□□□ -0.31
CNOT2-209ENST00000548159 LRFN3Q9BTN0 628 aa13.14□□□□□ -0.31
CNOT2-209ENST00000548159 A8MXE2 369 aa13.13□□□□□ -0.31
CNOT2-209ENST00000548159 K7EN84 100 aa13.13□□□□□ -0.31
CNOT2-209ENST00000548159 LINC00869P0C866 280 aa13.13□□□□□ -0.31
CNOT2-209ENST00000548159 CCKARP32238 428 aa13.13□□□□□ -0.31
CNOT2-209ENST00000548159 PDLIM4P50479 330 aa13.13□□□□□ -0.31
CNOT2-209ENST00000548159 PRR20EP86478 221 aa13.13□□□□□ -0.31
CNOT2-209ENST00000548159 PRR20CP86479 221 aa13.13□□□□□ -0.31
CNOT2-209ENST00000548159 PRR20DP86480 221 aa13.13□□□□□ -0.31
CNOT2-209ENST00000548159 PRR20BP86481 221 aa13.13□□□□□ -0.31
CNOT2-209ENST00000548159 PRR20AP86496 221 aa13.13□□□□□ -0.31
CNOT2-209ENST00000548159 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.13□□□□□ -0.31
CNOT2-209ENST00000548159 ACY3Q96HD9 319 aa13.13□□□□□ -0.31
CNOT2-209ENST00000548159 CD99P14209 185 aa13.13□□□□□ -0.31
CNOT2-209ENST00000548159 NDUFB7P17568 137 aa13.13□□□□□ -0.31
CNOT2-209ENST00000548159 TIMP3P35625 211 aa13.13□□□□□ -0.31
CNOT2-209ENST00000548159 SELENOVP59797 346 aa13.13□□□□□ -0.31
CNOT2-209ENST00000548159 RHOBP62745 196 aa13.13□□□□□ -0.31
CNOT2-209ENST00000548159 LCN2P80188 198 aa13.13□□□□□ -0.31
CNOT2-209ENST00000548159 OR10W1Q8NGF6 305 aa13.13□□□□□ -0.31
CNOT2-209ENST00000548159 RNASEH2CQ8TDP1 164 aaKnown RBP13.13□□□□□ -0.31
CNOT2-209ENST00000548159 NEUROG1Q92886 237 aa13.13□□□□□ -0.31
CNOT2-209ENST00000548159 NCOR1P1Q9H4R4 102 aa13.13□□□□□ -0.31
CNOT2-209ENST00000548159 ELOVL5Q9NYP7 299 aa13.13□□□□□ -0.31
CNOT2-209ENST00000548159 TRAPPC1Q9Y5R8 145 aa13.13□□□□□ -0.31
CNOT2-209ENST00000548159 SLC17A3O00476 420 aa13.12□□□□□ -0.31
CNOT2-209ENST00000548159 DVL1O14640 695 aa13.12□□□□□ -0.31
CNOT2-209ENST00000548159 RPL29P47914 159 aaKnown RBP13.12□□□□□ -0.31
CNOT2-209ENST00000548159 FOXL1Q12952 345 aa13.12□□□□□ -0.31
CNOT2-209ENST00000548159 TEX38Q6PEX7 206 aa13.12□□□□□ -0.31
CNOT2-209ENST00000548159 SLC25A48Q6ZT89 311 aaKnown RBP13.12□□□□□ -0.31
CNOT2-209ENST00000548159 RPUSD1Q9UJJ7 312 aaKnown RBP13.12□□□□□ -0.31
CNOT2-209ENST00000548159 MDFIC2A0A1B0GVS7 189 aa13.12□□□□□ -0.31
CNOT2-209ENST00000548159 NUPR1O60356 82 aa13.12□□□□□ -0.31
CNOT2-209ENST00000548159 FCN3O75636 299 aa13.12□□□□□ -0.31
CNOT2-209ENST00000548159 CNN1P51911 297 aaKnown RBP13.12□□□□□ -0.31
CNOT2-209ENST00000548159 TMEM256Q8N2U0 113 aa13.12□□□□□ -0.31
CNOT2-209ENST00000548159 SLC35D1Q9NTN3 355 aa13.12□□□□□ -0.31
CNOT2-209ENST00000548159 RELNP78509 3460 aa13.12□□□□□ -0.31
CNOT2-209ENST00000548159 PLXNB1O43157 2135 aa13.12□□□□□ -0.31
CNOT2-209ENST00000548159 TEX50A0A1B0GTY4 177 aa13.11□□□□□ -0.31
CNOT2-209ENST00000548159 UPK2O00526 184 aa13.11□□□□□ -0.31
CNOT2-209ENST00000548159 OR4A8P0C604 315 aa13.11□□□□□ -0.31
CNOT2-209ENST00000548159 FRMD6-AS1P0C7T7 363 aa13.11□□□□□ -0.31
CNOT2-209ENST00000548159 CCL3L1P16619 93 aa13.11□□□□□ -0.31
CNOT2-209ENST00000548159 POU2AF1Q16633 256 aa13.11□□□□□ -0.31
CNOT2-209ENST00000548159 PLEKHA3Q9HB20 300 aa13.11□□□□□ -0.31
CNOT2-209ENST00000548159 TP53TG5Q9Y2B4 290 aa13.11□□□□□ -0.31
CNOT2-209ENST00000548159 NAV3Q8IVL0 2385 aa13.11□□□□□ -0.31
CNOT2-209ENST00000548159 ZNF705GA8MUZ8 300 aaPredicted RBP13.11□□□□□ -0.31
CNOT2-209ENST00000548159 GATCO43716 136 aaKnown RBP13.11□□□□□ -0.31
CNOT2-209ENST00000548159 DDTP30046 118 aa13.11□□□□□ -0.31
CNOT2-209ENST00000548159 CEACAM8P31997 349 aaPredicted RBP13.11□□□□□ -0.31
CNOT2-209ENST00000548159 REG1BP48304 166 aa13.11□□□□□ -0.31
CNOT2-209ENST00000548159 PKIAP61925 76 aa13.11□□□□□ -0.31
CNOT2-209ENST00000548159 OR5R1Q8NH85 324 aa13.11□□□□□ -0.31
CNOT2-209ENST00000548159 E7EUB6 86 aa13.1□□□□□ -0.31
CNOT2-209ENST00000548159 SAA1P0DJI8 122 aaPredicted RBP13.1□□□□□ -0.31
CNOT2-209ENST00000548159 PRCDQ00LT1 54 aa13.1□□□□□ -0.31
CNOT2-209ENST00000548159 OR5I1Q13606 314 aa13.1□□□□□ -0.31
CNOT2-209ENST00000548159 RAB31Q13636 194 aa13.1□□□□□ -0.31
CNOT2-209ENST00000548159 IGF2-ASQ6U949 168 aa13.1□□□□□ -0.31
CNOT2-209ENST00000548159 ZNF664Q8N3J9 261 aa13.1□□□□□ -0.31
CNOT2-209ENST00000548159 OR10G8Q8NGN5 311 aa13.1□□□□□ -0.31
CNOT2-209ENST00000548159 ADTRPQ96IZ2 230 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms