RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 NXT2Q9NPJ8 142 aaKnown RBP10.85□□□□□ -0.67
PTCH1-212ENST00000546744 CALYQ9NYX4 217 aa10.85□□□□□ -0.67
PTCH1-212ENST00000546744 CENPFP49454 3210 aa10.84□□□□□ -0.67
PTCH1-212ENST00000546744 TMEM50AO95807 157 aa10.84□□□□□ -0.67
PTCH1-212ENST00000546744 TSPOP30536 169 aa10.84□□□□□ -0.67
PTCH1-212ENST00000546744 ZNF83P51522 516 aa10.84□□□□□ -0.67
PTCH1-212ENST00000546744 PRSS12P56730 875 aa10.84□□□□□ -0.67
PTCH1-212ENST00000546744 SUPT4H1P63272 117 aaKnown RBP10.84□□□□□ -0.67
PTCH1-212ENST00000546744 PAQR4Q8N4S7 273 aaPredicted RBP10.84□□□□□ -0.67
PTCH1-212ENST00000546744 NRTNQ99748 197 aa10.84□□□□□ -0.67
PTCH1-212ENST00000546744 SSBP3Q9BWW4 388 aaPredicted RBP10.84□□□□□ -0.67
PTCH1-212ENST00000546744 MS4A5Q9H3V2 200 aa10.84□□□□□ -0.67
PTCH1-212ENST00000546744 C21orf140B9A014 251 aa10.84□□□□□ -0.67
PTCH1-212ENST00000546744 LYZL6O75951 148 aa10.84□□□□□ -0.67
PTCH1-212ENST00000546744 MGPP08493 103 aa10.84□□□□□ -0.67
PTCH1-212ENST00000546744 OR5P3Q8WZ94 311 aa10.84□□□□□ -0.67
PTCH1-212ENST00000546744 KIR2DL4Q99706 377 aa10.84□□□□□ -0.67
PTCH1-212ENST00000546744 WFDC1Q9HC57 220 aa10.84□□□□□ -0.67
PTCH1-212ENST00000546744 NYNRINQ9P2P1 1898 aaKnown RBP10.84□□□□□ -0.67
PTCH1-212ENST00000546744 MDP1Q86V88 176 aa10.84□□□□□ -0.67
PTCH1-212ENST00000546744 MOGAT3Q86VF5 341 aa10.84□□□□□ -0.67
PTCH1-212ENST00000546744 TSKUQ8WUA8 353 aa10.84□□□□□ -0.67
PTCH1-212ENST00000546744 TMEM186Q96B77 213 aa10.84□□□□□ -0.67
PTCH1-212ENST00000546744 HIGD1CA8MV81 97 aa10.84□□□□□ -0.67
PTCH1-212ENST00000546744 TMPRSS2O15393 492 aa10.84□□□□□ -0.67
PTCH1-212ENST00000546744 CGAP01215 116 aa10.84□□□□□ -0.67
PTCH1-212ENST00000546744 NEU1Q99519 415 aa10.84□□□□□ -0.67
PTCH1-212ENST00000546744 SEMA5BQ9P283 1151 aa10.84□□□□□ -0.67
PTCH1-212ENST00000546744 IGHV1OR15-9A0A0B4J2B8 117 aa10.83□□□□□ -0.68
PTCH1-212ENST00000546744 GAGE13Q4V321 117 aa10.83□□□□□ -0.68
PTCH1-212ENST00000546744 DNM1P46Q6ZS02 220 aa10.83□□□□□ -0.68
PTCH1-212ENST00000546744 OR52E5Q8NH55 327 aa10.83□□□□□ -0.68
PTCH1-212ENST00000546744 IDI2-AS1Q9NZ38 188 aa10.83□□□□□ -0.68
PTCH1-212ENST00000546744 FAM186AA6NE01 2351 aa10.83□□□□□ -0.68
PTCH1-212ENST00000546744 PROB1E7EW31 1015 aa10.83□□□□□ -0.68
PTCH1-212ENST00000546744 TSPAN13O95857 204 aa10.83□□□□□ -0.68
PTCH1-212ENST00000546744 MT-CO3P00414 261 aa10.83□□□□□ -0.68
PTCH1-212ENST00000546744 ID1P41134 155 aa10.83□□□□□ -0.68
PTCH1-212ENST00000546744 Q5PR19 223 aa10.83□□□□□ -0.68
PTCH1-212ENST00000546744 SAMD5Q5TGI4 173 aa10.83□□□□□ -0.68
PTCH1-212ENST00000546744 BHLHA15Q7RTS1 189 aaPredicted RBP10.83□□□□□ -0.68
PTCH1-212ENST00000546744 ZNF479Q96JC4 524 aa10.83□□□□□ -0.68
PTCH1-212ENST00000546744 SNHG12Q9BXW3 62 aa10.83□□□□□ -0.68
PTCH1-212ENST00000546744 SHISA7A6NL88 538 aa10.83□□□□□ -0.68
PTCH1-212ENST00000546744 RRHO14718 337 aa10.83□□□□□ -0.68
PTCH1-212ENST00000546744 COL9A1P20849 921 aa10.83□□□□□ -0.68
PTCH1-212ENST00000546744 MST1LQ2TV78 715 aa10.83□□□□□ -0.68
PTCH1-212ENST00000546744 SLC25A53Q5H9E4 307 aa10.83□□□□□ -0.68
PTCH1-212ENST00000546744 ZNF788Q6ZQV5 615 aa10.83□□□□□ -0.68
PTCH1-212ENST00000546744 C1QL2Q7Z5L3 287 aa10.83□□□□□ -0.68
PTCH1-212ENST00000546744 A6NNC1 897 aa10.82□□□□□ -0.68
PTCH1-212ENST00000546744 ATXN7O15265 892 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-212ENST00000546744 PAX2Q02962 417 aa10.82□□□□□ -0.68
PTCH1-212ENST00000546744 TMEM249Q2WGJ8 235 aa10.82□□□□□ -0.68
PTCH1-212ENST00000546744 ABHD12Q8N2K0 398 aa10.82□□□□□ -0.68
PTCH1-212ENST00000546744 OCC1Q8TAD7 63 aa10.82□□□□□ -0.68
PTCH1-212ENST00000546744 TRAV8-6A0A0B4J262 113 aa10.82□□□□□ -0.68
PTCH1-212ENST00000546744 EREGO14944 169 aa10.82□□□□□ -0.68
PTCH1-212ENST00000546744 NAPSAO96009 420 aa10.82□□□□□ -0.68
PTCH1-212ENST00000546744 MFAP4P55083 255 aa10.82□□□□□ -0.68
PTCH1-212ENST00000546744 TMPRSS3P57727 454 aa10.82□□□□□ -0.68
PTCH1-212ENST00000546744 ZFAND6Q6FIF0 208 aa10.82□□□□□ -0.68
PTCH1-212ENST00000546744 UBALD2Q8IYN6 164 aa10.82□□□□□ -0.68
PTCH1-212ENST00000546744 MUC15Q8N387 334 aa10.82□□□□□ -0.68
PTCH1-212ENST00000546744 FGF11Q92914 225 aa10.82□□□□□ -0.68
PTCH1-212ENST00000546744 ZNF501Q96CX3 271 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-212ENST00000546744 UBTD1Q9HAC8 227 aa10.82□□□□□ -0.68
PTCH1-212ENST00000546744 CEP350Q5VT06 3117 aa10.82□□□□□ -0.68
PTCH1-212ENST00000546744 CABIN1Q9Y6J0 2220 aa10.82□□□□□ -0.68
PTCH1-212ENST00000546744 GAGE12BA1L429 117 aa10.82□□□□□ -0.68
PTCH1-212ENST00000546744 SH2D7A6NKC9 451 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-212ENST00000546744 A8MWV9 139 aa10.82□□□□□ -0.68
PTCH1-212ENST00000546744 GPX1P07203 203 aa10.82□□□□□ -0.68
PTCH1-212ENST00000546744 TFF3Q07654 80 aa10.82□□□□□ -0.68
PTCH1-212ENST00000546744 MESP2Q0VG99 397 aa10.82□□□□□ -0.68
PTCH1-212ENST00000546744 FAM90A1Q86YD7 464 aa10.82□□□□□ -0.68
PTCH1-212ENST00000546744 FNDC4Q9H6D8 234 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-212ENST00000546744 A0A1W2PS18 150 aa10.81□□□□□ -0.68
PTCH1-212ENST00000546744 APOMO95445 188 aa10.81□□□□□ -0.68
PTCH1-212ENST00000546744 CKS1BP61024 79 aa10.81□□□□□ -0.68
PTCH1-212ENST00000546744 GAGE2BQ13066 116 aa10.81□□□□□ -0.68
PTCH1-212ENST00000546744 GAGE2EQ4V326 116 aa10.81□□□□□ -0.68
PTCH1-212ENST00000546744 OCIAD2Q56VL3 154 aa10.81□□□□□ -0.68
PTCH1-212ENST00000546744 GUSBP11Q6P575 273 aa10.81□□□□□ -0.68
PTCH1-212ENST00000546744 OR10W1Q8NGF6 305 aa10.81□□□□□ -0.68
PTCH1-212ENST00000546744 GAGE2DQ9UEU5 116 aa10.81□□□□□ -0.68
PTCH1-212ENST00000546744 RAXQ9Y2V3 346 aa10.81□□□□□ -0.68
PTCH1-212ENST00000546744 PCNTO95613 3336 aa10.81□□□□□ -0.68
PTCH1-212ENST00000546744 A0A0G2JLM5 398 aa10.81□□□□□ -0.68
PTCH1-212ENST00000546744 ARTNQ5T4W7 220 aa10.81□□□□□ -0.68
PTCH1-212ENST00000546744 UNQ5815/PRO19632Q6UWF5 114 aa10.81□□□□□ -0.68
PTCH1-212ENST00000546744 TRBV20OR9-2A0A075B6H5 130 aa10.81□□□□□ -0.68
PTCH1-212ENST00000546744 K7EQS6 105 aa10.81□□□□□ -0.68
PTCH1-212ENST00000546744 DPM2O94777 84 aa10.81□□□□□ -0.68
PTCH1-212ENST00000546744 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.81□□□□□ -0.68
PTCH1-212ENST00000546744 OR10J6PQ8NGY7 276 aa10.81□□□□□ -0.68
PTCH1-212ENST00000546744 SCN2AQ99250 2005 aa10.81□□□□□ -0.68
PTCH1-212ENST00000546744 KIF26BQ2KJY2 2108 aa10.81□□□□□ -0.68
PTCH1-212ENST00000546744 GOLT1AQ6ZVE7 132 aa10.81□□□□□ -0.68
PTCH1-212ENST00000546744 ONECUT1Q9UBC0 465 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms