RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 FABP12A6NFH5 140 aa8.71□□□□□ -1.02
YBX3-216ENST00000544622 NOL3O60936 208 aaKnown RBP8.71□□□□□ -1.02
YBX3-216ENST00000544622 DHFRP00374 187 aa8.71□□□□□ -1.02
YBX3-216ENST00000544622 REG1AP05451 166 aa8.71□□□□□ -1.02
YBX3-216ENST00000544622 SERPINE2P07093 398 aa8.71□□□□□ -1.02
YBX3-216ENST00000544622 P0C879 139 aa8.71□□□□□ -1.02
YBX3-216ENST00000544622 HIST1H1BP16401 226 aaKnown RBP8.71□□□□□ -1.02
YBX3-216ENST00000544622 MECP2P51608 486 aaKnown RBP8.71□□□□□ -1.02
YBX3-216ENST00000544622 SYNJ2BPP57105 145 aa8.71□□□□□ -1.02
YBX3-216ENST00000544622 ERVK-16P61578 105 aa8.71□□□□□ -1.02
YBX3-216ENST00000544622 EXOSC2Q13868 293 aaKnown RBP8.71□□□□□ -1.02
YBX3-216ENST00000544622 DEFB121Q5J5C9 76 aa8.71□□□□□ -1.02
YBX3-216ENST00000544622 FAM209BQ5JX69 171 aa8.71□□□□□ -1.02
YBX3-216ENST00000544622 FAAP20Q6NZ36 180 aa8.71□□□□□ -1.02
YBX3-216ENST00000544622 OR4C16Q8NGL9 310 aa8.71□□□□□ -1.02
YBX3-216ENST00000544622 OR1L8Q8NGR8 309 aa8.71□□□□□ -1.02
YBX3-216ENST00000544622 OR13C8Q8NGS7 320 aa8.71□□□□□ -1.02
YBX3-216ENST00000544622 OR5B3Q8NH48 314 aa8.71□□□□□ -1.02
YBX3-216ENST00000544622 PRR25Q96S07 402 aa8.71□□□□□ -1.02
YBX3-216ENST00000544622 TP53RKQ96S44 253 aa8.71□□□□□ -1.02
YBX3-216ENST00000544622 TSC22D3Q99576 134 aa8.71□□□□□ -1.02
YBX3-216ENST00000544622 RTBDNQ9BSG5 229 aaPredicted RBP8.71□□□□□ -1.02
YBX3-216ENST00000544622 RSL24D1Q9UHA3 163 aaKnown RBP8.71□□□□□ -1.02
YBX3-216ENST00000544622 PRNDQ9UKY0 176 aa8.71□□□□□ -1.02
YBX3-216ENST00000544622 SORL1Q92673 2214 aa8.7□□□□□ -1.02
YBX3-216ENST00000544622 C3orf85A0A1B0GTC6 90 aa8.7□□□□□ -1.02
YBX3-216ENST00000544622 C15orf61A6NNL5 157 aa8.7□□□□□ -1.02
YBX3-216ENST00000544622 H0Y980 276 aa8.7□□□□□ -1.02
YBX3-216ENST00000544622 CTSDP07339 412 aaPredicted RBP8.7□□□□□ -1.02
YBX3-216ENST00000544622 CSN3P07498 182 aa8.7□□□□□ -1.02
YBX3-216ENST00000544622 AKAIN1P0CW23 69 aa8.7□□□□□ -1.02
YBX3-216ENST00000544622 TRAPPC2P0DI81 140 aa8.7□□□□□ -1.02
YBX3-216ENST00000544622 TRAPPC2BP0DI82 140 aa8.7□□□□□ -1.02
YBX3-216ENST00000544622 SPNP16150 400 aa8.7□□□□□ -1.02
YBX3-216ENST00000544622 MFAP2P55001 183 aa8.7□□□□□ -1.02
YBX3-216ENST00000544622 SURF2Q15527 256 aaPredicted RBP8.7□□□□□ -1.02
YBX3-216ENST00000544622 RPEL1Q2QD12 228 aa8.7□□□□□ -1.02
YBX3-216ENST00000544622 ADAMTSL5Q6ZMM2 481 aa8.7□□□□□ -1.02
YBX3-216ENST00000544622 GDPD1Q8N9F7 314 aa8.7□□□□□ -1.02
YBX3-216ENST00000544622 ZFAND1Q8TCF1 268 aa8.7□□□□□ -1.02
YBX3-216ENST00000544622 MARCH1Q8TCQ1 289 aa8.7□□□□□ -1.02
YBX3-216ENST00000544622 LSM10Q969L4 123 aaKnown RBP8.7□□□□□ -1.02
YBX3-216ENST00000544622 OR4C12Q96R67 309 aa8.7□□□□□ -1.02
YBX3-216ENST00000544622 B9D2Q9BPU9 175 aa8.7□□□□□ -1.02
YBX3-216ENST00000544622 ELOVL1Q9BW60 279 aa8.7□□□□□ -1.02
YBX3-216ENST00000544622 C5orf66Q9H5L9 145 aa8.7□□□□□ -1.02
YBX3-216ENST00000544622 SLC2A8Q9NY64 477 aa8.7□□□□□ -1.02
YBX3-216ENST00000544622 FKBP11Q9NYL4 201 aa8.7□□□□□ -1.02
YBX3-216ENST00000544622 GPR132Q9UNW8 380 aa8.7□□□□□ -1.02
YBX3-216ENST00000544622 OR51B2Q9Y5P1 312 aa8.7□□□□□ -1.02
YBX3-216ENST00000544622 V9GYH0 126 aa8.7□□□□□ -1.02
YBX3-216ENST00000544622 MFSD2BA6NFX1 497 aa8.69□□□□□ -1.02
YBX3-216ENST00000544622 PPP5D1E7EU14 171 aa8.69□□□□□ -1.02
YBX3-216ENST00000544622 B3GALNT1O75752 331 aa8.69□□□□□ -1.02
YBX3-216ENST00000544622 SNAPC5O75971 98 aa8.69□□□□□ -1.02
YBX3-216ENST00000544622 CDS2O95674 445 aa8.69□□□□□ -1.02
YBX3-216ENST00000544622 IGKV1-5P01602 117 aa8.69□□□□□ -1.02
YBX3-216ENST00000544622 OR13C7P0DN81 318 aa8.69□□□□□ -1.02
YBX3-216ENST00000544622 GP9P14770 177 aa8.69□□□□□ -1.02
YBX3-216ENST00000544622 PGAM2P15259 253 aa8.69□□□□□ -1.02
YBX3-216ENST00000544622 UCP1P25874 307 aa8.69□□□□□ -1.02
YBX3-216ENST00000544622 PPP5CP53041 499 aa8.69□□□□□ -1.02
YBX3-216ENST00000544622 DCTN2Q13561 401 aaKnown RBP8.69□□□□□ -1.02
YBX3-216ENST00000544622 ZNF79Q15937 498 aa8.69□□□□□ -1.02
YBX3-216ENST00000544622 TATDN3Q17R31 274 aa8.69□□□□□ -1.02
YBX3-216ENST00000544622 SCGB2B2Q4G0G5 96 aa8.69□□□□□ -1.02
YBX3-216ENST00000544622 CCDC190Q86UF4 302 aa8.69□□□□□ -1.02
YBX3-216ENST00000544622 GPHB5Q86YW7 130 aa8.69□□□□□ -1.02
YBX3-216ENST00000544622 OR6Q1Q8NGQ2 317 aa8.69□□□□□ -1.02
YBX3-216ENST00000544622 CXorf58Q96LI9 332 aa8.69□□□□□ -1.02
YBX3-216ENST00000544622 THAP7Q9BT49 309 aaPredicted RBP8.69□□□□□ -1.02
YBX3-216ENST00000544622 F11RQ9Y624 299 aaKnown RBP8.69□□□□□ -1.02
YBX3-216ENST00000544622 TRBV7-1A0A0A6YYK4 115 aa8.68□□□□□ -1.02
YBX3-216ENST00000544622 A0A0B4J293 547 aa8.68□□□□□ -1.02
YBX3-216ENST00000544622 DISC1C4P0D8 188 aa8.68□□□□□ -1.02
YBX3-216ENST00000544622 INS-IGF2F8WCM5 200 aa8.68□□□□□ -1.02
YBX3-216ENST00000544622 LGALS9O00182 355 aa8.68□□□□□ -1.02
YBX3-216ENST00000544622 GGCTO75223 188 aaKnown RBP8.68□□□□□ -1.02
YBX3-216ENST00000544622 IGHV3-23P01764 117 aa8.68□□□□□ -1.02
YBX3-216ENST00000544622 HLA-AP01891 365 aaKnown RBP8.68□□□□□ -1.02
YBX3-216ENST00000544622 CLEC3BP05452 202 aa8.68□□□□□ -1.02
YBX3-216ENST00000544622 DEFA4P12838 97 aa8.68□□□□□ -1.02
YBX3-216ENST00000544622 ETV6P41212 452 aa8.68□□□□□ -1.02
YBX3-216ENST00000544622 H2BFWTQ7Z2G1 175 aa8.68□□□□□ -1.02
YBX3-216ENST00000544622 OR51S1Q8NGJ8 323 aa8.68□□□□□ -1.02
YBX3-216ENST00000544622 ZNF502Q8TBZ5 544 aa8.68□□□□□ -1.02
YBX3-216ENST00000544622 VN1R17PQ8TDU5 208 aa8.68□□□□□ -1.02
YBX3-216ENST00000544622 GLYATL2Q8WU03 294 aa8.68□□□□□ -1.02
YBX3-216ENST00000544622 TRIM63Q969Q1 353 aa8.68□□□□□ -1.02
YBX3-216ENST00000544622 EEF1AKMT3Q96AZ1 226 aa8.68□□□□□ -1.02
YBX3-216ENST00000544622 PRRT1Q99946 306 aa8.68□□□□□ -1.02
YBX3-216ENST00000544622 THYN1Q9P016 225 aa8.68□□□□□ -1.02
YBX3-216ENST00000544622 COPZ2Q9P299 210 aa8.68□□□□□ -1.02
YBX3-216ENST00000544622 CCDC160A6NGH7 325 aa8.67□□□□□ -1.02
YBX3-216ENST00000544622 F8W735 103 aaPredicted RBP8.67□□□□□ -1.02
YBX3-216ENST00000544622 OR2C1O95371 312 aa8.67□□□□□ -1.02
YBX3-216ENST00000544622 HSPE1P61604 102 aaKnown RBP8.67□□□□□ -1.02
YBX3-216ENST00000544622 PRCDQ00LT1 54 aa8.67□□□□□ -1.02
YBX3-216ENST00000544622 KLF9Q13886 244 aaPredicted RBP8.67□□□□□ -1.02
YBX3-216ENST00000544622 IZUMO4Q1ZYL8 232 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms