RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 V9GYY5 206 aaPredicted RBP2.9□□□□□ -1.95
SNHG1-220ENST00000544550 IGLV5-52A0A0A0MRZ9 124 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 A0A1W2PP11 408 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 C15orf62A8K5M9 175 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 J3QLW9 94 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 M0R1X1 148 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 NDUFA4O00483 81 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 CYB5BO43169 146 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 PDCD6O75340 191 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 GAGE7O76087 117 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 IFNA5P01569 189 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 CRYGCP07315 174 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 GAGE12FP0CL80 117 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 GAGE12GP0CL81 117 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 GAGE12IP0CL82 117 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 DEFA4P12838 97 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 ZNF19P17023 458 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 BDKRB2P30411 391 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 GPR183P32249 361 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 CEACAM6P40199 344 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 XGP55808 180 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 SEC61BP60468 96 aaKnown RBP2.89□□□□□ -1.95
SNHG1-220ENST00000544550 ZNF85Q03923 595 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 GAGE1Q13065 139 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 GAGE4Q13068 117 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 CDK10Q15131 360 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 KLK9Q2XQG4 91 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 TTC32Q5I0X7 151 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 C12orf73Q69YU5 71 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 ZNF767PQ75MW2 155 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 DHFR2Q86XF0 187 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 NKAIN3Q8N8D7 197 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 OR5AK2Q8NH90 309 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 VSTM2AQ8TAG5 236 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 ADTRPQ96IZ2 230 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 NEDD4LQ96PU5 975 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 ATP6V0BQ99437 205 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 THTPAQ9BU02 230 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 C1QTNF4Q9BXJ3 329 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 YTHDF1Q9BYJ9 559 aaKnown RBP2.89□□□□□ -1.95
SNHG1-220ENST00000544550 RIMS4Q9H426 269 aaPredicted RBP2.89□□□□□ -1.95
SNHG1-220ENST00000544550 ISG20L2Q9H9L3 353 aaKnown RBP2.89□□□□□ -1.95
SNHG1-220ENST00000544550 CHMP1AQ9HD42 196 aaPredicted RBP2.89□□□□□ -1.95
SNHG1-220ENST00000544550 ARGLU1Q9NWB6 273 aaPredicted RBP2.89□□□□□ -1.95
SNHG1-220ENST00000544550 TAS2R4Q9NYW5 299 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 CKLFQ9UBR5 152 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 KLK9Q9UKQ9 250 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 CELA1Q9UNI1 258 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 ETV7Q9Y603 341 aa2.89□□□□□ -1.95
SNHG1-220ENST00000544550 TRAV2A0A0B4J234 112 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 hDV102S1A0JD36 115 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 SRRM4A7MD48 611 aaKnown RBP2.88□□□□□ -1.95
SNHG1-220ENST00000544550 FAM90A26D6RGX4 464 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 CRTAPO75718 401 aaPredicted RBP2.88□□□□□ -1.95
SNHG1-220ENST00000544550 BAG2O95816 211 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 RPA2P15927 270 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 MGMTP16455 207 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 GNB3P16520 340 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 PTBP1P26599 531 aaKnown RBP eCLIP2.88□□□□□ -1.953e-55■■□□□ 13.5
SNHG1-220ENST00000544550 MAS1LP35410 378 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 RPL27AP46776 148 aaKnown RBP2.88□□□□□ -1.95
SNHG1-220ENST00000544550 TFPI2P48307 235 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 SERPINB10P48595 397 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 CCL18P55774 89 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 NUTF2P61970 127 aaKnown RBP2.88□□□□□ -1.95
SNHG1-220ENST00000544550 RPS27AP62979 156 aaKnown RBP2.88□□□□□ -1.95
SNHG1-220ENST00000544550 HLA-DRB3P79483 266 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 OXA1LQ15070 435 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 ATP6AP1Q15904 470 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 SSX1Q16384 188 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 CTF1Q16619 201 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 AWAT2Q6E213 333 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 CGB2Q6NT52 195 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 SPSB3Q6PJ21 355 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 GLIPR1L1Q6UWM5 242 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 IDO2Q6ZQW0 420 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 CEACAM19Q7Z692 300 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 C5orf24Q7Z6I8 188 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 ARHGAP24Q8N264 748 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 SYS1Q8N2H4 156 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 ACBD7Q8N6N7 88 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 ZNRF2Q8NHG8 242 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 SETD6Q8TBK2 473 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 ZNF502Q8TBZ5 544 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 GPR148Q8TDV2 347 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 GIMAP1Q8WWP7 306 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 ORAI1Q96D31 301 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 NRBF2Q96F24 287 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 BSCL2Q96G97 398 aaPredicted RBP2.88□□□□□ -1.95
SNHG1-220ENST00000544550 C4orf36Q96KX1 117 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 ABHD1Q96SE0 405 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 ZNF184Q99676 751 aaPredicted RBP2.88□□□□□ -1.95
SNHG1-220ENST00000544550 C20orf24Q9BUV8 137 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 SELENOIQ9C0D9 397 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 ZNF430Q9H8G1 570 aaPredicted RBP2.88□□□□□ -1.95
SNHG1-220ENST00000544550 IMPAD1Q9NX62 359 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 SMPXQ9UHP9 88 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 MYCBP2O75592 4640 aa2.88□□□□□ -1.95
SNHG1-220ENST00000544550 IGKV3-7A0A075B6H7 116 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 IGLV11-55A0A075B6I3 123 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms