RNA–Protein interactions for RNA: ENST00000544301.6

VIM-209, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best)

Gene VIM, Length 2,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-209ENST00000544301 CXorf1O96002 111 aa14.7□□□□□ -0.06
VIM-209ENST00000544301 S100A12P80511 92 aa14.7□□□□□ -0.06
VIM-209ENST00000544301 STPG3Q8N7X2 389 aa14.7□□□□□ -0.06
VIM-209ENST00000544301 NECAP1Q8NC96 275 aa14.7□□□□□ -0.06
VIM-209ENST00000544301 MRPL20Q9BYC9 149 aaKnown RBP14.7□□□□□ -0.06
VIM-209ENST00000544301 TMEM106BQ9NUM4 274 aa14.7□□□□□ -0.06
VIM-209ENST00000544301 KALRNO60229 2985 aa14.7□□□□□ -0.06
VIM-209ENST00000544301 VSTM5A8MXK1 200 aa14.69□□□□□ -0.06
VIM-209ENST00000544301 TRGC1P0CF51 173 aa14.69□□□□□ -0.06
VIM-209ENST00000544301 LYPD2Q6UXB3 125 aa14.69□□□□□ -0.06
VIM-209ENST00000544301 NEUROG1Q92886 237 aa14.69□□□□□ -0.06
VIM-209ENST00000544301 PYGO2Q9BRQ0 406 aa14.69□□□□□ -0.06
VIM-209ENST00000544301 BET1LQ9NYM9 111 aa14.69□□□□□ -0.06
VIM-209ENST00000544301 ROS1P08922 2347 aa14.69□□□□□ -0.06
VIM-209ENST00000544301 FNDC10F2Z333 226 aa14.69□□□□□ -0.06
VIM-209ENST00000544301 K7ENP7 123 aa14.69□□□□□ -0.06
VIM-209ENST00000544301 SAA1P0DJI8 122 aaPredicted RBP14.69□□□□□ -0.06
VIM-209ENST00000544301 GALR1P47211 349 aa14.69□□□□□ -0.06
VIM-209ENST00000544301 RPL29P47914 159 aaKnown RBP14.69□□□□□ -0.06
VIM-209ENST00000544301 RAB31Q13636 194 aa14.69□□□□□ -0.06
VIM-209ENST00000544301 RNASE6Q93091 150 aaKnown RBP14.69□□□□□ -0.06
VIM-209ENST00000544301 PCNX1Q96RV3 2341 aa14.69□□□□□ -0.06
VIM-209ENST00000544301 SHISA9B4DS77 424 aa14.68□□□□□ -0.06
VIM-209ENST00000544301 F6UZH7 168 aa14.68□□□□□ -0.06
VIM-209ENST00000544301 IGFBP2P18065 325 aa14.68□□□□□ -0.06
VIM-209ENST00000544301 EFNB3Q15768 340 aa14.68□□□□□ -0.06
VIM-209ENST00000544301 H1FXQ92522 213 aaKnown RBP14.68□□□□□ -0.06
VIM-209ENST00000544301 ANAPC16Q96DE5 110 aa14.68□□□□□ -0.06
VIM-209ENST00000544301 OR5B12Q96R08 314 aa14.68□□□□□ -0.06
VIM-209ENST00000544301 FKBP11Q9NYL4 201 aa14.68□□□□□ -0.06
VIM-209ENST00000544301 ADGRG4Q8IZF6 3080 aa14.68□□□□□ -0.06
VIM-209ENST00000544301 E7EQL1 145 aa14.68□□□□□ -0.06
VIM-209ENST00000544301 NDUFB3O43676 98 aa14.68□□□□□ -0.06
VIM-209ENST00000544301 NDUFB4O95168 129 aa14.68□□□□□ -0.06
VIM-209ENST00000544301 S100PP25815 95 aa14.68□□□□□ -0.06
VIM-209ENST00000544301 SPATA31B1PQ5VZV4 182 aa14.68□□□□□ -0.06
VIM-209ENST00000544301 DMRTC2Q8IXT2 367 aaPredicted RBP14.68□□□□□ -0.06
VIM-209ENST00000544301 OSR1Q8TAX0 266 aaPredicted RBP14.68□□□□□ -0.06
VIM-209ENST00000544301 SCNM1Q9BWG6 230 aa14.68□□□□□ -0.06
VIM-209ENST00000544301 SEPSECSQ9HD40 501 aaKnown RBP14.68□□□□□ -0.06
VIM-209ENST00000544301 NIT2Q9NQR4 276 aa14.68□□□□□ -0.06
VIM-209ENST00000544301 PTPRZ1P23471 2315 aaPredicted RBP14.67□□□□□ -0.06
VIM-209ENST00000544301 H0YJW9 148 aa14.67□□□□□ -0.06
VIM-209ENST00000544301 APOA2P02652 100 aa14.67□□□□□ -0.06
VIM-209ENST00000544301 PRR20EP86478 221 aa14.67□□□□□ -0.06
VIM-209ENST00000544301 PRR20CP86479 221 aa14.67□□□□□ -0.06
VIM-209ENST00000544301 PRR20DP86480 221 aa14.67□□□□□ -0.06
VIM-209ENST00000544301 PRR20BP86481 221 aa14.67□□□□□ -0.06
VIM-209ENST00000544301 PRR20AP86496 221 aa14.67□□□□□ -0.06
VIM-209ENST00000544301 TXNDC17Q9BRA2 123 aa14.67□□□□□ -0.06
VIM-209ENST00000544301 DERL1Q9BUN8 251 aa14.67□□□□□ -0.06
VIM-209ENST00000544301 ELOVL1Q9BW60 279 aa14.67□□□□□ -0.06
VIM-209ENST00000544301 SRD5A3Q9H8P0 318 aa14.67□□□□□ -0.06
VIM-209ENST00000544301 NGBQ9NPG2 151 aa14.67□□□□□ -0.06
VIM-209ENST00000544301 CEP295Q9C0D2 2601 aa14.67□□□□□ -0.06
VIM-209ENST00000544301 RHOBP62745 196 aa14.66□□□□□ -0.06
VIM-209ENST00000544301 C4orf17Q53FE4 359 aa14.66□□□□□ -0.06
VIM-209ENST00000544301 LRRC10Q5BKY1 277 aa14.66□□□□□ -0.06
VIM-209ENST00000544301 LINC01551Q86U37 167 aa14.66□□□□□ -0.06
VIM-209ENST00000544301 OR5AN1Q8NGI8 311 aa14.66□□□□□ -0.06
VIM-209ENST00000544301 OR5B3Q8NH48 314 aa14.66□□□□□ -0.06
VIM-209ENST00000544301 FAM122AQ96E09 287 aa14.66□□□□□ -0.06
VIM-209ENST00000544301 CTSZQ9UBR2 303 aa14.66□□□□□ -0.06
VIM-209ENST00000544301 DCHS1Q96JQ0 3298 aa14.66□□□□□ -0.06
VIM-209ENST00000544301 LINC00869P0C866 280 aa14.66□□□□□ -0.06
VIM-209ENST00000544301 GCHFRP30047 84 aa14.66□□□□□ -0.06
VIM-209ENST00000544301 REG1BP48304 166 aa14.66□□□□□ -0.06
VIM-209ENST00000544301 RBPJQ06330 500 aa14.66□□□□□ -0.06
VIM-209ENST00000544301 C2orf83Q53S99 150 aa14.66□□□□□ -0.06
VIM-209ENST00000544301 OR5T1Q8NG75 326 aa14.66□□□□□ -0.06
VIM-209ENST00000544301 HARBI1Q96MB7 349 aa14.66□□□□□ -0.06
VIM-209ENST00000544301 DYNLRB1Q9NP97 96 aa14.66□□□□□ -0.06
VIM-209ENST00000544301 TNCP24821 2201 aa14.66□□□□□ -0.06
VIM-209ENST00000544301 DVL1O14640 695 aa14.65□□□□□ -0.06
VIM-209ENST00000544301 ATP5IP56385 69 aaPredicted RBP14.65□□□□□ -0.06
VIM-209ENST00000544301 TMEM177Q53S58 311 aa14.65□□□□□ -0.06
VIM-209ENST00000544301 GFI1BQ5VTD9 330 aa14.65□□□□□ -0.06
VIM-209ENST00000544301 MOB3BQ86TA1 216 aa14.65□□□□□ -0.06
VIM-209ENST00000544301 SLC45A2Q9UMX9 530 aa14.65□□□□□ -0.06
VIM-209ENST00000544301 YTHDF2Q9Y5A9 579 aaKnown RBP14.65□□□□□ -0.06
VIM-209ENST00000544301 FOXH1O75593 365 aa14.65□□□□□ -0.06
VIM-209ENST00000544301 SOD3P08294 240 aa14.65□□□□□ -0.06
VIM-209ENST00000544301 RNASE2P10153 161 aaKnown RBP14.65□□□□□ -0.06
VIM-209ENST00000544301 COL8A2P25067 703 aa14.65□□□□□ -0.06
VIM-209ENST00000544301 TMEM144Q7Z5S9 345 aa14.65□□□□□ -0.06
VIM-209ENST00000544301 OR10W1Q8NGF6 305 aa14.65□□□□□ -0.06
VIM-209ENST00000544301 OR1L8Q8NGR8 309 aa14.65□□□□□ -0.06
VIM-209ENST00000544301 OR10X1Q8NGY0 326 aa14.65□□□□□ -0.06
VIM-209ENST00000544301 TMEM204Q9BSN7 226 aa14.65□□□□□ -0.06
VIM-209ENST00000544301 ELOA3CA0A087WX78 387 aaPredicted RBP14.64□□□□□ -0.07
VIM-209ENST00000544301 PPP1R2P9O14990 202 aa14.64□□□□□ -0.07
VIM-209ENST00000544301 FAM87AP0C7U9 286 aa14.64□□□□□ -0.07
VIM-209ENST00000544301 LOXP28300 417 aaPredicted RBP14.64□□□□□ -0.07
VIM-209ENST00000544301 CHRNB4P30926 498 aa14.64□□□□□ -0.07
VIM-209ENST00000544301 HIST3H2BBQ8N257 126 aa14.64□□□□□ -0.07
VIM-209ENST00000544301 LINC00311Q8N616 119 aa14.64□□□□□ -0.07
VIM-209ENST00000544301 C8orf31Q8N9H6 132 aa14.64□□□□□ -0.07
VIM-209ENST00000544301 OR4X1Q8NH49 305 aa14.64□□□□□ -0.07
VIM-209ENST00000544301 ZNF596Q8TC21 504 aa14.64□□□□□ -0.07
VIM-209ENST00000544301 PCGF1Q9BSM1 259 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms