RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 VAMP1P23763 118 aa11.72□□□□□ -0.53
CD9-210ENST00000543916 ASAH1Q13510 395 aa11.72□□□□□ -0.53
CD9-210ENST00000543916 DEFB136Q30KP8 78 aa11.72□□□□□ -0.53
CD9-210ENST00000543916 TREML4Q6UXN2 200 aa11.72□□□□□ -0.53
CD9-210ENST00000543916 SLC35G3Q8N808 338 aa11.72□□□□□ -0.53
CD9-210ENST00000543916 OR1L8Q8NGR8 309 aa11.72□□□□□ -0.53
CD9-210ENST00000543916 OR4A16Q8NH70 328 aa11.72□□□□□ -0.53
CD9-210ENST00000543916 C4orf3Q8WVX3 66 aa11.72□□□□□ -0.53
CD9-210ENST00000543916 IL22RA2Q969J5 263 aa11.72□□□□□ -0.53
CD9-210ENST00000543916 RRNAD1Q96FB5 475 aaKnown RBP11.72□□□□□ -0.53
CD9-210ENST00000543916 OR5B12Q96R08 314 aa11.72□□□□□ -0.53
CD9-210ENST00000543916 SLA2Q9H6Q3 261 aa11.72□□□□□ -0.53
CD9-210ENST00000543916 NDUFA4L2Q9NRX3 87 aa11.72□□□□□ -0.53
CD9-210ENST00000543916 NPIPB5A8MRT5 1133 aa11.71□□□□□ -0.53
CD9-210ENST00000543916 BRI3O95415 125 aa11.71□□□□□ -0.53
CD9-210ENST00000543916 TRAPPC2P0DI81 140 aa11.71□□□□□ -0.53
CD9-210ENST00000543916 TRAPPC2BP0DI82 140 aa11.71□□□□□ -0.53
CD9-210ENST00000543916 ANXA3P12429 323 aa11.71□□□□□ -0.53
CD9-210ENST00000543916 CTRB1P17538 263 aa11.71□□□□□ -0.53
CD9-210ENST00000543916 PSMB6P28072 239 aa11.71□□□□□ -0.53
CD9-210ENST00000543916 SLC6A1P30531 599 aa11.71□□□□□ -0.53
CD9-210ENST00000543916 ANKRD55Q3KP44 614 aa11.71□□□□□ -0.53
CD9-210ENST00000543916 CTRB2Q6GPI1 263 aa11.71□□□□□ -0.53
CD9-210ENST00000543916 Q6ZRM9 215 aa11.71□□□□□ -0.53
CD9-210ENST00000543916 OR5B3Q8NH48 314 aa11.71□□□□□ -0.53
CD9-210ENST00000543916 RNASE11Q8TAA1 199 aaKnown RBP11.71□□□□□ -0.53
CD9-210ENST00000543916 RAX2Q96IS3 184 aa11.71□□□□□ -0.53
CD9-210ENST00000543916 DUX3Q96PT4 197 aa11.71□□□□□ -0.53
CD9-210ENST00000543916 HINT2Q9BX68 163 aa11.71□□□□□ -0.53
CD9-210ENST00000543916 C20orf85Q9H1P6 137 aa11.71□□□□□ -0.53
CD9-210ENST00000543916 FKBP11Q9NYL4 201 aa11.71□□□□□ -0.53
CD9-210ENST00000543916 ZNF257Q9Y2Q1 563 aa11.71□□□□□ -0.53
CD9-210ENST00000543916 TRBV9A0A0B4J1U6 114 aa11.7□□□□□ -0.54
CD9-210ENST00000543916 I3L521 148 aa11.7□□□□□ -0.54
CD9-210ENST00000543916 SFT2D2O95562 160 aa11.7□□□□□ -0.54
CD9-210ENST00000543916 IGHV3-11P01762 117 aa11.7□□□□□ -0.54
CD9-210ENST00000543916 TCRBP04435 133 aa11.7□□□□□ -0.54
CD9-210ENST00000543916 CRYGCP07315 174 aa11.7□□□□□ -0.54
CD9-210ENST00000543916 ANXA7P20073 488 aaKnown RBP11.7□□□□□ -0.54
CD9-210ENST00000543916 UBE2MP61081 183 aaKnown RBP11.7□□□□□ -0.54
CD9-210ENST00000543916 WT1-ASQ06250 92 aa11.7□□□□□ -0.54
CD9-210ENST00000543916 THOC7Q6I9Y2 204 aaKnown RBP11.7□□□□□ -0.54
CD9-210ENST00000543916 LYZL2Q7Z4W2 148 aa11.7□□□□□ -0.54
CD9-210ENST00000543916 FAM219AQ8IW50 185 aa11.7□□□□□ -0.54
CD9-210ENST00000543916 LGI3Q8N145 548 aa11.7□□□□□ -0.54
CD9-210ENST00000543916 GPR146Q96CH1 333 aa11.7□□□□□ -0.54
CD9-210ENST00000543916 SRSF8Q9BRL6 282 aaKnown RBP11.7□□□□□ -0.54
CD9-210ENST00000543916 ALX4Q9H161 411 aaPredicted RBP11.7□□□□□ -0.54
CD9-210ENST00000543916 ST8SIA3O43173 380 aa11.69□□□□□ -0.54
CD9-210ENST00000543916 PF4P02776 101 aa11.69□□□□□ -0.54
CD9-210ENST00000543916 SRPXP78539 464 aa11.69□□□□□ -0.54
CD9-210ENST00000543916 RUNX1Q01196 453 aa11.69□□□□□ -0.54
CD9-210ENST00000543916 SPINK9Q5DT21 86 aa11.69□□□□□ -0.54
CD9-210ENST00000543916 MZT2BQ6NZ67 158 aa11.69□□□□□ -0.54
CD9-210ENST00000543916 ZNF429Q86V71 674 aa11.69□□□□□ -0.54
CD9-210ENST00000543916 LSM10Q969L4 123 aaKnown RBP11.69□□□□□ -0.54
CD9-210ENST00000543916 FANCD2OSQ96PS1 177 aa11.69□□□□□ -0.54
CD9-210ENST00000543916 CACNG5Q9UF02 275 aa11.69□□□□□ -0.54
CD9-210ENST00000543916 CMYA5Q8N3K9 4069 aa11.68□□□□□ -0.54
CD9-210ENST00000543916 A0A0B4J2A0 478 aa11.68□□□□□ -0.54
CD9-210ENST00000543916 C9orf170A2RU37 121 aa11.68□□□□□ -0.54
CD9-210ENST00000543916 HLA-AP01891 365 aaKnown RBP11.68□□□□□ -0.54
CD9-210ENST00000543916 LGALS1P09382 135 aaKnown RBP11.68□□□□□ -0.54
CD9-210ENST00000543916 OR4E1P0C645 316 aa11.68□□□□□ -0.54
CD9-210ENST00000543916 OR13C7P0DN81 318 aa11.68□□□□□ -0.54
CD9-210ENST00000543916 HSPE1P61604 102 aaKnown RBP11.68□□□□□ -0.54
CD9-210ENST00000543916 RHOGP84095 191 aa11.68□□□□□ -0.54
CD9-210ENST00000543916 PRCDQ00LT1 54 aa11.68□□□□□ -0.54
CD9-210ENST00000543916 NMSQ5H8A3 153 aa11.68□□□□□ -0.54
CD9-210ENST00000543916 LRTM2Q8N967 370 aa11.68□□□□□ -0.54
CD9-210ENST00000543916 P2RX4Q99571 388 aa11.68□□□□□ -0.54
CD9-210ENST00000543916 NUDT15Q9NV35 164 aa11.68□□□□□ -0.54
CD9-210ENST00000543916 SHPKQ9UHJ6 478 aa11.68□□□□□ -0.54
CD9-210ENST00000543916 DMRT1Q9Y5R6 373 aa11.68□□□□□ -0.54
CD9-210ENST00000543916 TRAV6A0A075B6T7 132 aa11.67□□□□□ -0.54
CD9-210ENST00000543916 C13orf42A0A1B0GVH6 325 aa11.67□□□□□ -0.54
CD9-210ENST00000543916 FAM240BA0A1B0GVZ2 78 aa11.67□□□□□ -0.54
CD9-210ENST00000543916 FAM223BA6NKX1 122 aa11.67□□□□□ -0.54
CD9-210ENST00000543916 CCL24O00175 119 aa11.67□□□□□ -0.54
CD9-210ENST00000543916 OR2J3O76001 311 aa11.67□□□□□ -0.54
CD9-210ENST00000543916 MYCNOSP40205 109 aa11.67□□□□□ -0.54
CD9-210ENST00000543916 MECP2P51608 486 aaKnown RBP11.67□□□□□ -0.54
CD9-210ENST00000543916 DHRS2Q13268 280 aa11.67□□□□□ -0.54
CD9-210ENST00000543916 KLK9Q2XQG4 91 aa11.67□□□□□ -0.54
CD9-210ENST00000543916 AARDQ4LEZ3 155 aa11.67□□□□□ -0.54
CD9-210ENST00000543916 HSD17B13Q7Z5P4 300 aaPredicted RBP11.67□□□□□ -0.54
CD9-210ENST00000543916 LYG2Q86SG7 212 aa11.67□□□□□ -0.54
CD9-210ENST00000543916 FAM223AQ8IWN6 122 aa11.67□□□□□ -0.54
CD9-210ENST00000543916 MRPL41Q8IXM3 137 aaKnown RBP11.67□□□□□ -0.54
CD9-210ENST00000543916 LINC00482Q8N8I6 264 aa11.67□□□□□ -0.54
CD9-210ENST00000543916 KLK9Q9UKQ9 250 aa11.67□□□□□ -0.54
CD9-210ENST00000543916 IGLV11-55A0A075B6I3 123 aa11.66□□□□□ -0.54
CD9-210ENST00000543916 A0A0G2JLM5 398 aa11.66□□□□□ -0.54
CD9-210ENST00000543916 DUXBA0A1W2PPF3 345 aa11.66□□□□□ -0.54
CD9-210ENST00000543916 NDUFB8O95169 186 aa11.66□□□□□ -0.54
CD9-210ENST00000543916 DHFRP00374 187 aa11.66□□□□□ -0.54
CD9-210ENST00000543916 IFNA17P01571 189 aa11.66□□□□□ -0.54
CD9-210ENST00000543916 SULT1A3P0DMM9 295 aa11.66□□□□□ -0.54
CD9-210ENST00000543916 SULT1A4P0DMN0 295 aa11.66□□□□□ -0.54
CD9-210ENST00000543916 DEFA4P12838 97 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms