RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 RTTNQ86VV8 2226 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 IGKV3D-15A0A087WSY6 115 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 OR2T8A6NH00 312 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 G3V4G9 280 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 SYS1-DBNDD2H3BUS1 97 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 SPINK4O60575 86 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 LEPROTL1O95214 131 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 GOSR1O95249 250 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 GPR183P32249 361 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 NTF4P34130 210 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 MFAP2P55001 183 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 ERVK11-1P61568 191 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 RELBQ01201 579 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 GABRA6Q16445 453 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 PSG3Q16557 428 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 PSMG4Q5JS54 123 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 SLC23A3Q6PIS1 610 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 Q6ZVH6 145 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 DOLPP1Q86YN1 238 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 ZNF808Q8N4W9 903 aaPredicted RBP4.14□□□□□ -1.75
LMO3-229ENST00000543721 NHLRC2Q8NBF2 726 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 ABHD3Q8WU67 409 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 NANOS1Q8WY41 292 aaKnown RBP4.14□□□□□ -1.75
LMO3-229ENST00000543721 PRSS46E5RG02 174 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 H3BRM9 83 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 SPINT2O43291 252 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 CGAP01215 116 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 CCL3P10147 92 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 DEFA4P12838 97 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 CA6P23280 308 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 CA7P43166 264 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 TCL1AP56279 114 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 NXPH1P58417 271 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 PRR20EP86478 221 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 PRR20CP86479 221 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 PRR20DP86480 221 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 PRR20BP86481 221 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 PRR20AP86496 221 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 RBPJQ06330 500 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 PCOLCEQ15113 449 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 BPIFA4PQ86YQ2 179 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 OR10D3Q8NH80 312 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 OR2T6Q8NHC8 308 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 ZNF488Q96MN9 340 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 RNASE7Q9H1E1 156 aaKnown RBP4.14□□□□□ -1.75
LMO3-229ENST00000543721 GCM1Q9NP62 436 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 RAB9BQ9NP90 201 aa4.14□□□□□ -1.75
LMO3-229ENST00000543721 KIAA1549Q9HCM3 1950 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 KMT2EQ8IZD2 1858 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 MUC21A0A0G2JKD1 596 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 MUC21A0A140T8X8 626 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 GFRA3O60609 400 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 SMPD2O60906 423 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 RHBDL1O75783 438 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 DUTP33316 252 aaKnown RBP4.13□□□□□ -1.75
LMO3-229ENST00000543721 SSTR5P35346 364 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 B3GALT5-AS1P59052 145 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 RPS16P62249 146 aaKnown RBP4.13□□□□□ -1.75
LMO3-229ENST00000543721 MRPL49Q13405 166 aaKnown RBP4.13□□□□□ -1.75
LMO3-229ENST00000543721 MUC21Q5SSG8 566 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 TSTD1Q8NFU3 115 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 SSMEM1Q8WWF3 244 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 BADQ92934 168 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 MBD6Q96DN6 1003 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 GP6Q9HCN6 339 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 SCRT2Q9NQ03 307 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 DEPPQ9NTK1 212 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 CLCF1Q9UBD9 225 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 DUSP13Q9UII6 198 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 F5P12259 2224 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 IGHV1OR15-9A0A0B4J2B8 117 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.13□□□□□ -1.75
LMO3-229ENST00000543721 C21orf140B9A014 251 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 C12orf77C9JDV5 145 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 J3QR89 54 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 M0R296 226 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 C8orf88P0DMB2 117 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 SRFP11831 508 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 GPR12P47775 334 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 SLAQ13239 276 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 FXYD3Q14802 87 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 VHLLQ6RSH7 139 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 GGNQ86UU5 652 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 TMEM251Q8N6I4 163 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 TMEM190Q8WZ59 177 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 IGF2BP2-AS1Q96M15 143 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 CDX2Q99626 313 aaPredicted RBP4.13□□□□□ -1.75
LMO3-229ENST00000543721 COL25A1Q9BXS0 654 aaPredicted RBP4.13□□□□□ -1.75
LMO3-229ENST00000543721 TCF19Q9Y242 345 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 PCDH15Q96QU1 1955 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 A0A1B0GV72 72 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 C7orf71A4D174 169 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 C9orf118A6NHY6 69 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 OR9G9P0C7N8 305 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 FRMD6-AS1P0C7T7 363 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 COX8AP10176 69 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 HTR1DP28221 377 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 HBBP68871 147 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 TMEM97Q5BJF2 176 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 CT83Q5H943 113 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms