RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 TRIB1Q96RU8 372 aa11.3□□□□□ -0.6
VPS33A-208ENST00000543633 MIEN1Q9BRT3 115 aa11.3□□□□□ -0.6
VPS33A-208ENST00000543633 OSTCQ9NRP0 149 aa11.3□□□□□ -0.6
VPS33A-208ENST00000543633 CALYQ9NYX4 217 aa11.3□□□□□ -0.6
VPS33A-208ENST00000543633 DUSP13Q9UII6 198 aa11.3□□□□□ -0.6
VPS33A-208ENST00000543633 PRNDQ9UKY0 176 aa11.3□□□□□ -0.6
VPS33A-208ENST00000543633 ZNF257Q9Y2Q1 563 aa11.3□□□□□ -0.6
VPS33A-208ENST00000543633 V9GYV3 84 aa11.3□□□□□ -0.6
VPS33A-208ENST00000543633 A0A1B0GUS0 222 aa11.3□□□□□ -0.6
VPS33A-208ENST00000543633 SERF1AO75920 110 aa11.3□□□□□ -0.6
VPS33A-208ENST00000543633 AGFG2O95081 481 aa11.3□□□□□ -0.6
VPS33A-208ENST00000543633 OR10J3Q5JRS4 329 aa11.3□□□□□ -0.6
VPS33A-208ENST00000543633 PQLC2Q6ZP29 291 aa11.3□□□□□ -0.6
VPS33A-208ENST00000543633 MMD2Q8IY49 270 aa11.3□□□□□ -0.6
VPS33A-208ENST00000543633 IL19Q9UHD0 177 aa11.3□□□□□ -0.6
VPS33A-208ENST00000543633 MED13Q9UHV7 2174 aa11.29□□□□□ -0.6
VPS33A-208ENST00000543633 TRAV3A0A0B4J244 114 aa11.29□□□□□ -0.6
VPS33A-208ENST00000543633 SPAARA0A1B0GVQ0 90 aa11.29□□□□□ -0.6
VPS33A-208ENST00000543633 FTH1P19P0C7X4 201 aa11.29□□□□□ -0.6
VPS33A-208ENST00000543633 FABP6P51161 128 aa11.29□□□□□ -0.6
VPS33A-208ENST00000543633 LTC4SQ16873 150 aa11.29□□□□□ -0.6
VPS33A-208ENST00000543633 HLA-DRB5Q30154 266 aa11.29□□□□□ -0.6
VPS33A-208ENST00000543633 TOMM20LQ6UXN7 152 aa11.29□□□□□ -0.6
VPS33A-208ENST00000543633 SEPSECSQ9HD40 501 aaKnown RBP11.29□□□□□ -0.6
VPS33A-208ENST00000543633 TECRQ9NZ01 308 aaKnown RBP11.29□□□□□ -0.6
VPS33A-208ENST00000543633 ZFHX2Q9C0A1 2572 aaPredicted RBP11.29□□□□□ -0.6
VPS33A-208ENST00000543633 IGHV1-18A0A0C4DH31 117 aa11.28□□□□□ -0.6
VPS33A-208ENST00000543633 GRIFINA4D1Z8 144 aa11.28□□□□□ -0.6
VPS33A-208ENST00000543633 FCN1O00602 326 aa11.28□□□□□ -0.6
VPS33A-208ENST00000543633 TM4SF5O14894 197 aa11.28□□□□□ -0.6
VPS33A-208ENST00000543633 CA2P00918 260 aa11.28□□□□□ -0.6
VPS33A-208ENST00000543633 CRYABP02511 175 aaKnown RBP11.28□□□□□ -0.6
VPS33A-208ENST00000543633 LINC00869P0C866 280 aa11.28□□□□□ -0.6
VPS33A-208ENST00000543633 GNG4P50150 75 aa11.28□□□□□ -0.6
VPS33A-208ENST00000543633 CX3CL1P78423 397 aa11.28□□□□□ -0.6
VPS33A-208ENST00000543633 SPATA31B1PQ5VZV4 182 aa11.28□□□□□ -0.6
VPS33A-208ENST00000543633 OR4A47Q6IF82 309 aa11.28□□□□□ -0.6
VPS33A-208ENST00000543633 CNEP1R1Q8N9A8 125 aa11.28□□□□□ -0.6
VPS33A-208ENST00000543633 OR4P4Q8NGL7 312 aa11.28□□□□□ -0.6
VPS33A-208ENST00000543633 PLSCR4Q9NRQ2 329 aa11.28□□□□□ -0.6
VPS33A-208ENST00000543633 RIF1Q5UIP0 2472 aaKnown RBP11.28□□□□□ -0.6
VPS33A-208ENST00000543633 SNURFLB1AK76 121 aa11.28□□□□□ -0.6
VPS33A-208ENST00000543633 MMP23AO75900 390 aa11.28□□□□□ -0.6
VPS33A-208ENST00000543633 RPLP1P05386 114 aaKnown RBP11.28□□□□□ -0.6
VPS33A-208ENST00000543633 ZNF134P52741 427 aa11.28□□□□□ -0.6
VPS33A-208ENST00000543633 TAS2R45P59539 299 aa11.28□□□□□ -0.6
VPS33A-208ENST00000543633 HOXA4Q00056 320 aaPredicted RBP11.28□□□□□ -0.6
VPS33A-208ENST00000543633 BAGE3Q86Y29 109 aa11.28□□□□□ -0.6
VPS33A-208ENST00000543633 BAGE2Q86Y30 109 aa11.28□□□□□ -0.6
VPS33A-208ENST00000543633 VKORC1L1Q8N0U8 176 aa11.28□□□□□ -0.6
VPS33A-208ENST00000543633 OR2Z1Q8NG97 314 aa11.28□□□□□ -0.6
VPS33A-208ENST00000543633 OR4B1Q8NGF8 309 aa11.28□□□□□ -0.6
VPS33A-208ENST00000543633 HSPB9Q9BQS6 159 aa11.28□□□□□ -0.6
VPS33A-208ENST00000543633 IDI2-AS1Q9NZ38 188 aa11.28□□□□□ -0.6
VPS33A-208ENST00000543633 SLC17A3O00476 420 aa11.27□□□□□ -0.61
VPS33A-208ENST00000543633 ISLRO14498 428 aa11.27□□□□□ -0.61
VPS33A-208ENST00000543633 OR5G3P0C626 314 aa11.27□□□□□ -0.61
VPS33A-208ENST00000543633 PRCDQ00LT1 54 aa11.27□□□□□ -0.61
VPS33A-208ENST00000543633 KRTCAP3Q53RY4 240 aa11.27□□□□□ -0.61
VPS33A-208ENST00000543633 CENPWQ5EE01 88 aa11.27□□□□□ -0.61
VPS33A-208ENST00000543633 VWA1Q6PCB0 445 aa11.27□□□□□ -0.61
VPS33A-208ENST00000543633 SARAFQ96BY9 339 aa11.27□□□□□ -0.61
VPS33A-208ENST00000543633 RNF2Q99496 336 aa11.27□□□□□ -0.61
VPS33A-208ENST00000543633 VAMP8Q9BV40 100 aa11.27□□□□□ -0.61
VPS33A-208ENST00000543633 FAM234AQ9H0X4 552 aa11.27□□□□□ -0.61
VPS33A-208ENST00000543633 ZNF586Q9NXT0 402 aa11.27□□□□□ -0.61
VPS33A-208ENST00000543633 AHCTF1Q8WYP5 2266 aa11.27□□□□□ -0.61
VPS33A-208ENST00000543633 A0A1W2PRE2 83 aa11.26□□□□□ -0.61
VPS33A-208ENST00000543633 HELTA6NFD8 242 aa11.26□□□□□ -0.61
VPS33A-208ENST00000543633 IGHV3-13P01766 116 aa11.26□□□□□ -0.61
VPS33A-208ENST00000543633 REG1AP05451 166 aa11.26□□□□□ -0.61
VPS33A-208ENST00000543633 SAA2P0DJI9 122 aaPredicted RBP11.26□□□□□ -0.61
VPS33A-208ENST00000543633 IGFBP2P18065 325 aa11.26□□□□□ -0.61
VPS33A-208ENST00000543633 HNF1AP20823 631 aa11.26□□□□□ -0.61
VPS33A-208ENST00000543633 BRS3P32247 399 aa11.26□□□□□ -0.61
VPS33A-208ENST00000543633 IER3P46695 156 aa11.26□□□□□ -0.61
VPS33A-208ENST00000543633 GAGE1Q13065 139 aa11.26□□□□□ -0.61
VPS33A-208ENST00000543633 C3orf36Q3SXR2 165 aa11.26□□□□□ -0.61
VPS33A-208ENST00000543633 TIGITQ495A1 244 aa11.26□□□□□ -0.61
VPS33A-208ENST00000543633 C2orf83Q53S99 150 aa11.26□□□□□ -0.61
VPS33A-208ENST00000543633 C9orf106Q8NAJ2 232 aa11.26□□□□□ -0.61
VPS33A-208ENST00000543633 FAM222BQ8WU58 562 aa11.26□□□□□ -0.61
VPS33A-208ENST00000543633 NABP2Q9BQ15 211 aa11.26□□□□□ -0.61
VPS33A-208ENST00000543633 MRPL32Q9BYC8 188 aaKnown RBP11.26□□□□□ -0.61
VPS33A-208ENST00000543633 SAMD10Q9BYL1 202 aa11.26□□□□□ -0.61
VPS33A-208ENST00000543633 FZR1Q9UM11 496 aa11.26□□□□□ -0.61
VPS33A-208ENST00000543633 CACNA1GO43497 2377 aa11.26□□□□□ -0.61
VPS33A-208ENST00000543633 KBTBD11-OT1A0A1B0GTJ5 212 aa11.26□□□□□ -0.61
VPS33A-208ENST00000543633 CGAP01215 116 aa11.26□□□□□ -0.61
VPS33A-208ENST00000543633 LHBP01229 141 aa11.26□□□□□ -0.61
VPS33A-208ENST00000543633 HLA-DQA1P01909 254 aa11.26□□□□□ -0.61
VPS33A-208ENST00000543633 C17orf58Q2M2W7 97 aa11.26□□□□□ -0.61
VPS33A-208ENST00000543633 MIR17HGQ75NE6 70 aa11.26□□□□□ -0.61
VPS33A-208ENST00000543633 ASCL5Q7RTU5 278 aa11.26□□□□□ -0.61
VPS33A-208ENST00000543633 LRP11Q86VZ4 500 aa11.26□□□□□ -0.61
VPS33A-208ENST00000543633 ZNF439Q8NDP4 499 aa11.26□□□□□ -0.61
VPS33A-208ENST00000543633 LINC00574Q9H8X3 128 aa11.26□□□□□ -0.61
VPS33A-208ENST00000543633 PLEKHA3Q9HB20 300 aa11.26□□□□□ -0.61
VPS33A-208ENST00000543633 OR51B2Q9Y5P1 312 aa11.26□□□□□ -0.61
VPS33A-208ENST00000543633 GVINP1Q7Z2Y8 2422 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms