RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 TRBV9A0A0B4J1U6 114 aa6.87□□□□□ -1.31
PRKAB1-207ENST00000542698 TRGV8A0A0C4DH27 118 aa6.87□□□□□ -1.31
PRKAB1-207ENST00000542698 PGPA6NDG6 321 aa6.87□□□□□ -1.31
PRKAB1-207ENST00000542698 C16orf97H3BN30 126 aa6.87□□□□□ -1.31
PRKAB1-207ENST00000542698 ZNF883P0CG24 379 aa6.87□□□□□ -1.31
PRKAB1-207ENST00000542698 PAX9P55771 341 aa6.87□□□□□ -1.31
PRKAB1-207ENST00000542698 ATP5IP56385 69 aaPredicted RBP6.87□□□□□ -1.31
PRKAB1-207ENST00000542698 RPL30P62888 115 aaKnown RBP6.87□□□□□ -1.31
PRKAB1-207ENST00000542698 WDR82Q6UXN9 313 aa6.87□□□□□ -1.31
PRKAB1-207ENST00000542698 SSC4DQ8WTU2 575 aa6.87□□□□□ -1.31
PRKAB1-207ENST00000542698 GTF3C1Q12789 2109 aa6.87□□□□□ -1.31
PRKAB1-207ENST00000542698 HYPMO75409 117 aa6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 IL18BPO95998 194 aa6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 IGFBP2P18065 325 aa6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 GLRXP35754 106 aa6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 TNFSF10P50591 281 aa6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 FOXF2Q12947 444 aa6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 ACSF3Q4G176 576 aaPredicted RBP6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 ARSJQ5FYB0 599 aaPredicted RBP6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 NHLRC2Q8NBF2 726 aa6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 OCC1Q8TAD7 63 aa6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 ZNF714Q96N38 554 aa6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 ASCL3Q9NQ33 180 aa6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 YTHDF2Q9Y5A9 579 aaKnown RBP6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 LAMA3Q16787 3333 aa6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 TFF1P04155 84 aa6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 DUTP33316 252 aaKnown RBP6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 RND2P52198 227 aa6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 MORN2Q502X0 79 aa6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 ZNF585BQ52M93 769 aa6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 OR4A47Q6IF82 309 aa6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 ZCCHC14Q8WYQ9 949 aaKnown RBP6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 LOXL4Q96JB6 756 aa6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 UQCR10Q9UDW1 63 aa6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 RNF24Q9Y225 148 aa6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 RNF115Q9Y4L5 304 aa6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 PLCE1Q9P212 2302 aa6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 IGHV3-21A0A0B4J1V1 117 aa6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 YPEL1O60688 119 aa6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 IGHV3-48P01763 117 aa6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 MC5RP33032 325 aa6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 ZNF137PP52743 207 aa6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 PMCHL1Q16048 86 aa6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 SPATA45Q537H7 98 aa6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 FAM201AQ5SY85 155 aa6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 HCP5Q6MZN7 132 aa6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 Q6P435 159 aa6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 NPIPB3Q92617 1050 aa6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 YPEL2Q96QA6 119 aa6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 ATG101Q9BSB4 218 aa6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 GSX1Q9H4S2 264 aaPredicted RBP6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 ZNF430Q9H8G1 570 aaPredicted RBP6.86□□□□□ -1.31
PRKAB1-207ENST00000542698 GPX4P36969 197 aaPredicted RBP6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 NHLH1Q02575 133 aa6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 TCF23Q7RTU1 214 aa6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 C1orf162Q8NEQ5 155 aaPredicted RBP6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 RASL11BQ9BPW5 248 aa6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 SSBP3Q9BWW4 388 aaPredicted RBP6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 TNFRSF19Q9NS68 423 aa6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 PIEZO1Q92508 2521 aa6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 IGHV3-72A0A0B4J1Y9 119 aa6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 IGHV2OR16-5A0A0B4J2B6 119 aa6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 NCBP2LA6PVI3 153 aaKnown RBP6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 OR5AL1P0C617 328 aa6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 RPL27AP46776 148 aaKnown RBP6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 LINC01551Q86U37 167 aa6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 LURAP1LQ8IV03 231 aa6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 OR4C13Q8NGP0 309 aa6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 MAP1LC3CQ9BXW4 147 aa6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 GNB4Q9HAV0 340 aa6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 COL6A6A6NMZ7 2263 aa6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 KBTBD11-OT1A0A1B0GTJ5 212 aa6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 RBFOX2O43251 390 aaKnown RBP eCLIP6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 SLC25A17O43808 307 aa6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 OR9G9P0C7N8 305 aa6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 ANOS1P23352 680 aa6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 ASCL5Q7RTU5 278 aa6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 TMEM144Q7Z5S9 345 aa6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 TMEM105Q8N8V8 129 aa6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 SGK494Q96LW2 274 aa6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 TMEM106BQ9NUM4 274 aa6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 PLA2G2EQ9NZK7 142 aa6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 TRAV9-1A0A075B6T8 112 aa6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 NPIPB11E5RHQ5 1161 aa6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 AMY1AP04745 511 aa6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 GATA2P23769 480 aaPredicted RBP6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 RIGQ13278 110 aa6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 TREML4Q6UXN2 200 aa6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 RNF138Q8WVD3 245 aa6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 THYN1Q9P016 225 aa6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 ONECUT1Q9UBC0 465 aa6.85□□□□□ -1.31
PRKAB1-207ENST00000542698 KIAA1549LQ6ZVL6 1849 aa6.84□□□□□ -1.31
PRKAB1-207ENST00000542698 DPRXA6NFQ7 191 aa6.84□□□□□ -1.31
PRKAB1-207ENST00000542698 TCF21O43680 179 aa6.84□□□□□ -1.31
PRKAB1-207ENST00000542698 SERF1AO75920 110 aa6.84□□□□□ -1.31
PRKAB1-207ENST00000542698 CTAG1AP78358 180 aa6.84□□□□□ -1.31
PRKAB1-207ENST00000542698 EFNB3Q15768 340 aa6.84□□□□□ -1.31
PRKAB1-207ENST00000542698 TIMM23BQ5SRD1 257 aa6.84□□□□□ -1.31
PRKAB1-207ENST00000542698 TEX38Q6PEX7 206 aa6.84□□□□□ -1.31
PRKAB1-207ENST00000542698 MIR17HGQ75NE6 70 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms