RNA–Protein interactions for RNA: ENST00000542328.5

ABCB8-222, Transcript of ATP binding cassette subfamily B member 8, human

TSL 2 BASIC

Gene ABCB8, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCB8-222	ENST00000542328		B4DSR2	109 aa		10.27	□□□□□ -0.76
ABCB8-222	ENST00000542328	OR1L6	Q8NGR2	347 aa		10.27	□□□□□ -0.76
ABCB8-222	ENST00000542328	IGSF23	A1L1A6	192 aa		10.27	□□□□□ -0.77
ABCB8-222	ENST00000542328	PHOX2A	O14813	284 aa		10.27	□□□□□ -0.77
ABCB8-222	ENST00000542328	RND2	P52198	227 aa		10.27	□□□□□ -0.77
ABCB8-222	ENST00000542328	RND3	P61587	244 aa		10.27	□□□□□ -0.77
ABCB8-222	ENST00000542328	LY6E	Q16553	131 aa		10.27	□□□□□ -0.77
ABCB8-222	ENST00000542328	OR10D4P	Q8NGN7	298 aa		10.27	□□□□□ -0.77
ABCB8-222	ENST00000542328	RAB24	Q969Q5	203 aa		10.27	□□□□□ -0.77
ABCB8-222	ENST00000542328	PCNX3	Q9H6A9	2034 aa		10.27	□□□□□ -0.77
ABCB8-222	ENST00000542328	HYPM	O75409	117 aa		10.27	□□□□□ -0.77
ABCB8-222	ENST00000542328	KRTDAP	P60985	99 aa		10.27	□□□□□ -0.77
ABCB8-222	ENST00000542328	MEF2B	Q02080	365 aa	Predicted RBP	10.27	□□□□□ -0.77
ABCB8-222	ENST00000542328	FAM74A3	Q4VXF1	159 aa		10.27	□□□□□ -0.77
ABCB8-222	ENST00000542328	OSR1	Q8TAX0	266 aa	Predicted RBP	10.27	□□□□□ -0.77
ABCB8-222	ENST00000542328		Q8TCH9	128 aa		10.27	□□□□□ -0.77
ABCB8-222	ENST00000542328	TRAV14DV4	A0A0A6YYC5	116 aa		10.26	□□□□□ -0.77
ABCB8-222	ENST00000542328	MFSD2B	A6NFX1	497 aa		10.26	□□□□□ -0.77
ABCB8-222	ENST00000542328	RAB5A	P20339	215 aa		10.26	□□□□□ -0.77
ABCB8-222	ENST00000542328	SRSF7	Q16629	238 aa	Known RBP eCLIP	10.26	□□□□□ -0.77
ABCB8-222	ENST00000542328	RPEL1	Q2QD12	228 aa		10.26	□□□□□ -0.77
ABCB8-222	ENST00000542328	BPESC1	Q9GZL8	116 aa		10.26	□□□□□ -0.77
ABCB8-222	ENST00000542328	RPUSD1	Q9UJJ7	312 aa	Known RBP	10.26	□□□□□ -0.77
ABCB8-222	ENST00000542328	RNF222	A6NCQ9	220 aa		10.26	□□□□□ -0.77
ABCB8-222	ENST00000542328	IGHV3-48	P01763	117 aa		10.26	□□□□□ -0.77
ABCB8-222	ENST00000542328	CD55	P08174	381 aa		10.26	□□□□□ -0.77
ABCB8-222	ENST00000542328	PMCH	P20382	165 aa		10.26	□□□□□ -0.77
ABCB8-222	ENST00000542328	SLC35B1	P78383	322 aa		10.26	□□□□□ -0.77
ABCB8-222	ENST00000542328	MORN2	Q502X0	79 aa		10.26	□□□□□ -0.77
ABCB8-222	ENST00000542328	LY6G6F	Q5SQ64	297 aa		10.26	□□□□□ -0.77
ABCB8-222	ENST00000542328	FAM162B	Q5T6X4	162 aa		10.26	□□□□□ -0.77
ABCB8-222	ENST00000542328		Q6P435	159 aa		10.26	□□□□□ -0.77
ABCB8-222	ENST00000542328	HEPN1	Q6WQI6	88 aa		10.26	□□□□□ -0.77
ABCB8-222	ENST00000542328	ZNF525	Q8N782	197 aa		10.26	□□□□□ -0.77
ABCB8-222	ENST00000542328	TNFRSF14	Q92956	283 aa		10.26	□□□□□ -0.77
ABCB8-222	ENST00000542328	GAFA1	Q96PS6	74 aa		10.26	□□□□□ -0.77
ABCB8-222	ENST00000542328	QTRT1	Q9BXR0	403 aa	Known RBP	10.26	□□□□□ -0.77
ABCB8-222	ENST00000542328	IGKV1D-17	A0A075B6S4	117 aa		10.26	□□□□□ -0.77
ABCB8-222	ENST00000542328	DANCR	P0C864	163 aa		10.26	□□□□□ -0.77
ABCB8-222	ENST00000542328	SELENOT	P62341	195 aa		10.26	□□□□□ -0.77
ABCB8-222	ENST00000542328	PAXX	Q9BUH6	204 aa		10.26	□□□□□ -0.77
ABCB8-222	ENST00000542328	METRN	Q9UJH8	293 aa		10.26	□□□□□ -0.77
ABCB8-222	ENST00000542328	NAT1	P18440	290 aa		10.26	□□□□□ -0.77
ABCB8-222	ENST00000542328	QRFP	P83859	136 aa		10.26	□□□□□ -0.77
ABCB8-222	ENST00000542328	ANAPC16	Q96DE5	110 aa		10.26	□□□□□ -0.77
ABCB8-222	ENST00000542328	CHD8	Q9HCK8	2581 aa		10.26	□□□□□ -0.77
ABCB8-222	ENST00000542328	CLEC5A	Q9NY25	188 aa		10.26	□□□□□ -0.77
ABCB8-222	ENST00000542328	SHISA9	B4DS77	424 aa		10.25	□□□□□ -0.77
ABCB8-222	ENST00000542328	IGLV3-1	P01715	115 aa		10.25	□□□□□ -0.77
ABCB8-222	ENST00000542328	LDLRAD3	Q86YD5	345 aa		10.25	□□□□□ -0.77
ABCB8-222	ENST00000542328	NDUFB4	O95168	129 aa		10.25	□□□□□ -0.77
ABCB8-222	ENST00000542328	NAPSA	O96009	420 aa		10.25	□□□□□ -0.77
ABCB8-222	ENST00000542328	REG1A	P05451	166 aa		10.25	□□□□□ -0.77
ABCB8-222	ENST00000542328	CHD9	Q3L8U1	2897 aa		10.25	□□□□□ -0.77
ABCB8-222	ENST00000542328	COMP	P49747	757 aa	Predicted RBP	10.25	□□□□□ -0.77
ABCB8-222	ENST00000542328	RPRM	Q9NS64	109 aa		10.25	□□□□□ -0.77
ABCB8-222	ENST00000542328	COL8A1	P27658	744 aa		10.24	□□□□□ -0.77
ABCB8-222	ENST00000542328	UNQ5815/PRO19632	Q6UWF5	114 aa		10.24	□□□□□ -0.77
ABCB8-222	ENST00000542328	NOL4L	Q96MY1	436 aa	Predicted RBP	10.24	□□□□□ -0.77
ABCB8-222	ENST00000542328	CORT	O00230	105 aa		10.24	□□□□□ -0.77
ABCB8-222	ENST00000542328	CFHR2	P36980	270 aa		10.24	□□□□□ -0.77
ABCB8-222	ENST00000542328	TPPP2	P59282	170 aa		10.24	□□□□□ -0.77
ABCB8-222	ENST00000542328	ZNF418	Q8TF45	676 aa	Predicted RBP	10.24	□□□□□ -0.77
ABCB8-222	ENST00000542328	HIGD1A	Q9Y241	93 aa		10.24	□□□□□ -0.77
ABCB8-222	ENST00000542328	SLC31A2	O15432	143 aa		10.24	□□□□□ -0.77
ABCB8-222	ENST00000542328	HSPB1	P04792	205 aa	Known RBP	10.24	□□□□□ -0.77
ABCB8-222	ENST00000542328	PAX6	P26367	422 aa		10.24	□□□□□ -0.77
ABCB8-222	ENST00000542328	TMEM200B	Q69YZ2	307 aa		10.24	□□□□□ -0.77
ABCB8-222	ENST00000542328	OR5AU1	Q8NGC0	362 aa		10.24	□□□□□ -0.77
ABCB8-222	ENST00000542328	RARRES2	Q99969	163 aa		10.24	□□□□□ -0.77
ABCB8-222	ENST00000542328	MRPL20	Q9BYC9	149 aa	Known RBP	10.24	□□□□□ -0.77
ABCB8-222	ENST00000542328	SRD5A3	Q9H8P0	318 aa		10.24	□□□□□ -0.77
ABCB8-222	ENST00000542328	DNASE2	O00115	360 aa	Predicted RBP	10.24	□□□□□ -0.77
ABCB8-222	ENST00000542328	CFP	P27918	469 aa		10.24	□□□□□ -0.77
ABCB8-222	ENST00000542328	C16orf82	Q7Z2V1	217 aa		10.24	□□□□□ -0.77
ABCB8-222	ENST00000542328	EML6	Q6ZMW3	1958 aa		10.23	□□□□□ -0.77
ABCB8-222	ENST00000542328	TRBV6-6	A0A0A6YYG2	114 aa		10.23	□□□□□ -0.77
ABCB8-222	ENST00000542328	AP4M1	O00189	453 aa		10.23	□□□□□ -0.77
ABCB8-222	ENST00000542328	MRPL54	Q6P161	138 aa	Known RBP	10.23	□□□□□ -0.77
ABCB8-222	ENST00000542328	RNF126	Q9BV68	326 aa		10.23	□□□□□ -0.77
ABCB8-222	ENST00000542328	ZNF430	Q9H8G1	570 aa	Predicted RBP	10.23	□□□□□ -0.77
ABCB8-222	ENST00000542328	NAGK	Q9UJ70	344 aa		10.23	□□□□□ -0.77
ABCB8-222	ENST00000542328	FAM74A7	A6NL05	159 aa		10.23	□□□□□ -0.77
ABCB8-222	ENST00000542328	PF4V1	P10720	104 aa		10.23	□□□□□ -0.77
ABCB8-222	ENST00000542328	LYPD2	Q6UXB3	125 aa		10.23	□□□□□ -0.77
ABCB8-222	ENST00000542328	PQLC2	Q6ZP29	291 aa		10.23	□□□□□ -0.77
ABCB8-222	ENST00000542328	FA2H	Q7L5A8	372 aa		10.23	□□□□□ -0.77
ABCB8-222	ENST00000542328	OR5R1	Q8NH85	324 aa		10.23	□□□□□ -0.77
ABCB8-222	ENST00000542328	P2RX4	Q99571	388 aa		10.23	□□□□□ -0.77
ABCB8-222	ENST00000542328	MALRD1	Q5VYJ5	2156 aa		10.23	□□□□□ -0.77
ABCB8-222	ENST00000542328		P01737	135 aa		10.23	□□□□□ -0.77
ABCB8-222	ENST00000542328	CCKAR	P32238	428 aa		10.23	□□□□□ -0.77
ABCB8-222	ENST00000542328	GUSBP1	Q15486	140 aa		10.23	□□□□□ -0.77
ABCB8-222	ENST00000542328	TMEM56-RWDD3	S4R434	201 aa		10.23	□□□□□ -0.77
ABCB8-222	ENST00000542328	NCOA6	Q14686	2063 aa	Predicted RBP	10.22	□□□□□ -0.77
ABCB8-222	ENST00000542328	LOC102723971	A0A1B0GUV8	181 aa		10.22	□□□□□ -0.77
ABCB8-222	ENST00000542328		H0YIZ8	118 aa		10.22	□□□□□ -0.77
ABCB8-222	ENST00000542328		M0R1W7	72 aa		10.22	□□□□□ -0.77
ABCB8-222	ENST00000542328	RNASEK	Q6P5S7	137 aa	Known RBP	10.22	□□□□□ -0.77
ABCB8-222	ENST00000542328	SGMS2	Q8NHU3	365 aa		10.22	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms