RNA–Protein interactions for RNA: ENST00000541852.5

ITM2C-208, Transcript of integral membrane protein 2C, human

TSL 3

Gene ITM2C, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITM2C-208	ENST00000541852	SERPINE2	P07093	398 aa		11.15	□□□□□ -0.62
ITM2C-208	ENST00000541852	GPR183	P32249	361 aa		11.15	□□□□□ -0.62
ITM2C-208	ENST00000541852	CMC4	P56277	68 aa	Predicted RBP	11.15	□□□□□ -0.62
ITM2C-208	ENST00000541852	TNFRSF9	Q07011	255 aa		11.15	□□□□□ -0.62
ITM2C-208	ENST00000541852	DHRS11	Q6UWP2	260 aa		11.15	□□□□□ -0.62
ITM2C-208	ENST00000541852	UNQ9165/PRO28630	Q6UXU0	137 aa		11.15	□□□□□ -0.62
ITM2C-208	ENST00000541852	CROCCP3	Q8IVE0	287 aa		11.15	□□□□□ -0.62
ITM2C-208	ENST00000541852	KIR2DL5A	Q8N109	375 aa		11.15	□□□□□ -0.62
ITM2C-208	ENST00000541852	GVQW1	Q8N7I0	195 aa		11.15	□□□□□ -0.62
ITM2C-208	ENST00000541852	GDPD1	Q8N9F7	314 aa		11.15	□□□□□ -0.62
ITM2C-208	ENST00000541852	KIR2DL5B	Q8NHK3	375 aa		11.15	□□□□□ -0.62
ITM2C-208	ENST00000541852	GPHA2	Q96T91	129 aa		11.15	□□□□□ -0.62
ITM2C-208	ENST00000541852	AUNIP	Q9H7T9	357 aa		11.15	□□□□□ -0.62
ITM2C-208	ENST00000541852	FKBP11	Q9NYL4	201 aa		11.15	□□□□□ -0.62
ITM2C-208	ENST00000541852	EPPK1	P58107	5090 aa	Known RBP	11.15	□□□□□ -0.62
ITM2C-208	ENST00000541852	NUPR2	A6NF83	97 aa		11.14	□□□□□ -0.63
ITM2C-208	ENST00000541852		K7EMT4	169 aa		11.14	□□□□□ -0.63
ITM2C-208	ENST00000541852	SPRY2	O43597	315 aa		11.14	□□□□□ -0.63
ITM2C-208	ENST00000541852	HERV-K104	P61576	105 aa		11.14	□□□□□ -0.63
ITM2C-208	ENST00000541852	MXD1	Q05195	221 aa		11.14	□□□□□ -0.63
ITM2C-208	ENST00000541852	IDNK	Q5T6J7	187 aa		11.14	□□□□□ -0.63
ITM2C-208	ENST00000541852	SLC25A24	Q6NUK1	477 aa		11.14	□□□□□ -0.63
ITM2C-208	ENST00000541852	TMEM217	Q8N7C4	229 aa		11.14	□□□□□ -0.63
ITM2C-208	ENST00000541852	S100A16	Q96FQ6	103 aa	Known RBP	11.14	□□□□□ -0.63
ITM2C-208	ENST00000541852	DAZ1	Q9NQZ3	744 aa	Known RBP	11.14	□□□□□ -0.63
ITM2C-208	ENST00000541852	TMEM140	Q9NV12	185 aa		11.14	□□□□□ -0.63
ITM2C-208	ENST00000541852	BIRC6	Q9NR09	4857 aa		11.14	□□□□□ -0.63
ITM2C-208	ENST00000541852	NDUFA4	O00483	81 aa		11.13	□□□□□ -0.63
ITM2C-208	ENST00000541852	XRCC3	O43542	346 aa		11.13	□□□□□ -0.63
ITM2C-208	ENST00000541852	SNAPC5	O75971	98 aa		11.13	□□□□□ -0.63
ITM2C-208	ENST00000541852	OR13C7	P0DN81	318 aa		11.13	□□□□□ -0.63
ITM2C-208	ENST00000541852	F2R	P25116	425 aa		11.13	□□□□□ -0.63
ITM2C-208	ENST00000541852	GNRHR	P30968	328 aa		11.13	□□□□□ -0.63
ITM2C-208	ENST00000541852	FXYD4	P59646	89 aa		11.13	□□□□□ -0.63
ITM2C-208	ENST00000541852	AADACL3	Q5VUY0	350 aa		11.13	□□□□□ -0.63
ITM2C-208	ENST00000541852	ZNF818P	Q6ZRF7	136 aa		11.13	□□□□□ -0.63
ITM2C-208	ENST00000541852	CMTM1	Q8IZ96	169 aa		11.13	□□□□□ -0.63
ITM2C-208	ENST00000541852	STPG3	Q8N7X2	389 aa		11.13	□□□□□ -0.63
ITM2C-208	ENST00000541852	TMEM190	Q8WZ59	177 aa		11.13	□□□□□ -0.63
ITM2C-208	ENST00000541852	SLC25A38	Q96DW6	304 aa		11.13	□□□□□ -0.63
ITM2C-208	ENST00000541852	TMEM56	Q96MV1	263 aa		11.13	□□□□□ -0.63
ITM2C-208	ENST00000541852	C6orf62	Q9GZU0	229 aa	Predicted RBP	11.13	□□□□□ -0.63
ITM2C-208	ENST00000541852	NDUFA4L2	Q9NRX3	87 aa		11.13	□□□□□ -0.63
ITM2C-208	ENST00000541852	KLK5	Q9Y337	293 aa	Predicted RBP	11.13	□□□□□ -0.63
ITM2C-208	ENST00000541852	TRAV3	A0A0B4J244	114 aa		11.12	□□□□□ -0.63
ITM2C-208	ENST00000541852	TEX50	A0A1B0GTY4	177 aa		11.12	□□□□□ -0.63
ITM2C-208	ENST00000541852	CXorf65	A6NEN9	183 aa		11.12	□□□□□ -0.63
ITM2C-208	ENST00000541852	OR4C46	A6NHA9	309 aa		11.12	□□□□□ -0.63
ITM2C-208	ENST00000541852	S100G	P29377	79 aa		11.12	□□□□□ -0.63
ITM2C-208	ENST00000541852	ZNF773	Q6PK81	442 aa		11.12	□□□□□ -0.63
ITM2C-208	ENST00000541852	TSPAN14	Q8NG11	270 aa		11.12	□□□□□ -0.63
ITM2C-208	ENST00000541852	OR5H6	Q8NGV6	325 aa		11.12	□□□□□ -0.63
ITM2C-208	ENST00000541852	OR51H1	Q8NH63	302 aa		11.12	□□□□□ -0.63
ITM2C-208	ENST00000541852	LSM10	Q969L4	123 aa	Known RBP	11.12	□□□□□ -0.63
ITM2C-208	ENST00000541852	IFT46	Q9NQC8	304 aa		11.12	□□□□□ -0.63
ITM2C-208	ENST00000541852	F11R	Q9Y624	299 aa	Known RBP	11.12	□□□□□ -0.63
ITM2C-208	ENST00000541852	LOC100506127	A0A0U1RQW1	187 aa		11.11	□□□□□ -0.63
ITM2C-208	ENST00000541852	OR2T8	A6NH00	312 aa		11.11	□□□□□ -0.63
ITM2C-208	ENST00000541852	MARCH11	A6NNE9	402 aa		11.11	□□□□□ -0.63
ITM2C-208	ENST00000541852	C15orf62	A8K5M9	175 aa		11.11	□□□□□ -0.63
ITM2C-208	ENST00000541852	PGLYRP1	O75594	196 aa	Predicted RBP	11.11	□□□□□ -0.63
ITM2C-208	ENST00000541852	S1PR2	O95136	353 aa		11.11	□□□□□ -0.63
ITM2C-208	ENST00000541852	PTHLH	P12272	177 aa		11.11	□□□□□ -0.63
ITM2C-208	ENST00000541852	TAS2R46	P59540	309 aa		11.11	□□□□□ -0.63
ITM2C-208	ENST00000541852	LPCAT3	Q6P1A2	487 aa		11.11	□□□□□ -0.63
ITM2C-208	ENST00000541852	TMEM17	Q86X19	198 aa		11.11	□□□□□ -0.63
ITM2C-208	ENST00000541852	OR10W1	Q8NGF6	305 aa		11.11	□□□□□ -0.63
ITM2C-208	ENST00000541852	LINC00476	Q8WZB0	136 aa		11.11	□□□□□ -0.63
ITM2C-208	ENST00000541852	GALNT14	Q96FL9	552 aa		11.11	□□□□□ -0.63
ITM2C-208	ENST00000541852	TSC22D3	Q99576	134 aa		11.11	□□□□□ -0.63
ITM2C-208	ENST00000541852	FAM212B	Q9NTI7	297 aa	Predicted RBP	11.11	□□□□□ -0.63
ITM2C-208	ENST00000541852	C21orf62	Q9NYP8	219 aa		11.11	□□□□□ -0.63
ITM2C-208	ENST00000541852	EHF	Q9NZC4	300 aa		11.11	□□□□□ -0.63
ITM2C-208	ENST00000541852	PRND	Q9UKY0	176 aa		11.11	□□□□□ -0.63
ITM2C-208	ENST00000541852	IGHV3-35	A0A0C4DH35	117 aa		11.1	□□□□□ -0.63
ITM2C-208	ENST00000541852	CD5	P06127	495 aa		11.1	□□□□□ -0.63
ITM2C-208	ENST00000541852	REL	Q04864	619 aa	Predicted RBP	11.1	□□□□□ -0.63
ITM2C-208	ENST00000541852	WT1-AS	Q06250	92 aa		11.1	□□□□□ -0.63
ITM2C-208	ENST00000541852	PLEC	Q15149	4684 aa	Known RBP	11.1	□□□□□ -0.63
ITM2C-208	ENST00000541852	CEMP1	Q6PRD7	247 aa	Predicted RBP	11.1	□□□□□ -0.63
ITM2C-208	ENST00000541852	LYG2	Q86SG7	212 aa		11.1	□□□□□ -0.63
ITM2C-208	ENST00000541852	OR6F1	Q8NGZ6	308 aa		11.1	□□□□□ -0.63
ITM2C-208	ENST00000541852	OR5B3	Q8NH48	314 aa		11.1	□□□□□ -0.63
ITM2C-208	ENST00000541852	SCARB1	Q8WTV0	552 aa		11.1	□□□□□ -0.63
ITM2C-208	ENST00000541852	MOB3A	Q96BX8	217 aa		11.1	□□□□□ -0.63
ITM2C-208	ENST00000541852	RNF183	Q96D59	192 aa		11.1	□□□□□ -0.63
ITM2C-208	ENST00000541852	DGCR14	Q96DF8	476 aa	Known RBP	11.1	□□□□□ -0.63
ITM2C-208	ENST00000541852	TXN2	Q99757	166 aa		11.1	□□□□□ -0.63
ITM2C-208	ENST00000541852	OR51B2	Q9Y5P1	312 aa		11.1	□□□□□ -0.63
ITM2C-208	ENST00000541852	SELENOK	Q9Y6D0	94 aa		11.1	□□□□□ -0.63
ITM2C-208	ENST00000541852	HYDIN	Q4G0P3	5121 aa		11.1	□□□□□ -0.63
ITM2C-208	ENST00000541852		A0A0J9YWU9	116 aa		11.09	□□□□□ -0.63
ITM2C-208	ENST00000541852	LY6G6C	O95867	125 aa		11.09	□□□□□ -0.63
ITM2C-208	ENST00000541852	KRAS	P01116	189 aa		11.09	□□□□□ -0.63
ITM2C-208	ENST00000541852	CLEC2L	P0C7M8	214 aa		11.09	□□□□□ -0.63
ITM2C-208	ENST00000541852	ZNF2	Q9BSG1	426 aa	Predicted RBP	11.09	□□□□□ -0.63
ITM2C-208	ENST00000541852	HINT2	Q9BX68	163 aa		11.09	□□□□□ -0.63
ITM2C-208	ENST00000541852	GPR31	O00270	319 aa		11.08	□□□□□ -0.64
ITM2C-208	ENST00000541852	NUPL2	O15504	423 aa	Known RBP	11.08	□□□□□ -0.64
ITM2C-208	ENST00000541852	NAT1	P18440	290 aa		11.08	□□□□□ -0.64

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