RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 OR5B3Q8NH48 314 aa10.06□□□□□ -0.8
LTBR-208ENST00000541005 MRAPQ8TCY5 172 aa10.06□□□□□ -0.8
LTBR-208ENST00000541005 TRIM63Q969Q1 353 aa10.06□□□□□ -0.8
LTBR-208ENST00000541005 TSC22D3Q99576 134 aa10.06□□□□□ -0.8
LTBR-208ENST00000541005 PRRT1Q99946 306 aa10.06□□□□□ -0.8
LTBR-208ENST00000541005 NDUFA4L2Q9NRX3 87 aa10.06□□□□□ -0.8
LTBR-208ENST00000541005 TMEM14BQ9NUH8 114 aa10.06□□□□□ -0.8
LTBR-208ENST00000541005 FKBP11Q9NYL4 201 aa10.06□□□□□ -0.8
LTBR-208ENST00000541005 PRNDQ9UKY0 176 aa10.06□□□□□ -0.8
LTBR-208ENST00000541005 TEX50A0A1B0GTY4 177 aa10.05□□□□□ -0.8
LTBR-208ENST00000541005 WI2-2373I1.2A0A1W2PRP0 233 aa10.05□□□□□ -0.8
LTBR-208ENST00000541005 ANKRD34BA5PLL1 514 aa10.05□□□□□ -0.8
LTBR-208ENST00000541005 SNAPC5O75971 98 aa10.05□□□□□ -0.8
LTBR-208ENST00000541005 OR2J3O76001 311 aa10.05□□□□□ -0.8
LTBR-208ENST00000541005 TRBV12-3P01733 135 aa10.05□□□□□ -0.8
LTBR-208ENST00000541005 SERPINE2P07093 398 aa10.05□□□□□ -0.8
LTBR-208ENST00000541005 P0C879 139 aa10.05□□□□□ -0.8
LTBR-208ENST00000541005 TRAPPC2P0DI81 140 aa10.05□□□□□ -0.8
LTBR-208ENST00000541005 TRAPPC2BP0DI82 140 aa10.05□□□□□ -0.8
LTBR-208ENST00000541005 S100A5P33763 92 aa10.05□□□□□ -0.8
LTBR-208ENST00000541005 ETV6P41212 452 aa10.05□□□□□ -0.8
LTBR-208ENST00000541005 KLF5Q13887 457 aaPredicted RBP10.05□□□□□ -0.8
LTBR-208ENST00000541005 ZNF79Q15937 498 aa10.05□□□□□ -0.8
LTBR-208ENST00000541005 C19orf35Q6ZS72 473 aa10.05□□□□□ -0.8
LTBR-208ENST00000541005 MARCH1Q8TCQ1 289 aa10.05□□□□□ -0.8
LTBR-208ENST00000541005 TP53RKQ96S44 253 aa10.05□□□□□ -0.8
LTBR-208ENST00000541005 COPZ2Q9P299 210 aa10.05□□□□□ -0.8
LTBR-208ENST00000541005 C3orf85A0A1B0GTC6 90 aa10.04□□□□□ -0.8
LTBR-208ENST00000541005 BMPR1BO00238 502 aa10.04□□□□□ -0.8
LTBR-208ENST00000541005 UCP1P25874 307 aa10.04□□□□□ -0.8
LTBR-208ENST00000541005 WT1-ASQ06250 92 aa10.04□□□□□ -0.8
LTBR-208ENST00000541005 KLF9Q13886 244 aaPredicted RBP10.04□□□□□ -0.8
LTBR-208ENST00000541005 H2BFWTQ7Z2G1 175 aa10.04□□□□□ -0.8
LTBR-208ENST00000541005 GDPD1Q8N9F7 314 aa10.04□□□□□ -0.8
LTBR-208ENST00000541005 OR51S1Q8NGJ8 323 aa10.04□□□□□ -0.8
LTBR-208ENST00000541005 DEDD2Q8WXF8 326 aa10.04□□□□□ -0.8
LTBR-208ENST00000541005 LSM10Q969L4 123 aaKnown RBP10.04□□□□□ -0.8
LTBR-208ENST00000541005 RTBDNQ9BSG5 229 aaPredicted RBP10.04□□□□□ -0.8
LTBR-208ENST00000541005 THAP7Q9BT49 309 aaPredicted RBP10.04□□□□□ -0.8
LTBR-208ENST00000541005 C5orf66Q9H5L9 145 aa10.04□□□□□ -0.8
LTBR-208ENST00000541005 NDUFA13Q9P0J0 144 aa10.04□□□□□ -0.8
LTBR-208ENST00000541005 FBXL7Q9UJT9 491 aa10.04□□□□□ -0.8
LTBR-208ENST00000541005 C14orf166Q9Y224 244 aaKnown RBP10.04□□□□□ -0.8
LTBR-208ENST00000541005 NSG2Q9Y328 171 aa10.04□□□□□ -0.8
LTBR-208ENST00000541005 OR51B2Q9Y5P1 312 aa10.04□□□□□ -0.8
LTBR-208ENST00000541005 DMRT1Q9Y5R6 373 aa10.04□□□□□ -0.8
LTBR-208ENST00000541005 DBX1A6NMT0 343 aa10.03□□□□□ -0.8
LTBR-208ENST00000541005 ATG12O94817 140 aa10.03□□□□□ -0.8
LTBR-208ENST00000541005 NDUFB8O95169 186 aa10.03□□□□□ -0.8
LTBR-208ENST00000541005 IGKV1-5P01602 117 aa10.03□□□□□ -0.8
LTBR-208ENST00000541005 REG1AP05451 166 aa10.03□□□□□ -0.8
LTBR-208ENST00000541005 DCTN2Q13561 401 aaKnown RBP10.03□□□□□ -0.8
LTBR-208ENST00000541005 RPEL1Q2QD12 228 aa10.03□□□□□ -0.8
LTBR-208ENST00000541005 OR10W1Q8NGF6 305 aa10.03□□□□□ -0.8
LTBR-208ENST00000541005 OR9G4Q8NGQ1 327 aa10.03□□□□□ -0.8
LTBR-208ENST00000541005 CCDC140Q96MF4 163 aa10.03□□□□□ -0.8
LTBR-208ENST00000541005 SCP2D1Q9UJQ7 156 aa10.03□□□□□ -0.8
LTBR-208ENST00000541005 GPR132Q9UNW8 380 aa10.03□□□□□ -0.8
LTBR-208ENST00000541005 SAP30O75446 220 aa10.02□□□□□ -0.81
LTBR-208ENST00000541005 OR13C7P0DN81 318 aa10.02□□□□□ -0.81
LTBR-208ENST00000541005 DEFA4P12838 97 aa10.02□□□□□ -0.81
LTBR-208ENST00000541005 FAUP35544 74 aaKnown RBP10.02□□□□□ -0.81
LTBR-208ENST00000541005 AP3S2P59780 193 aa10.02□□□□□ -0.81
LTBR-208ENST00000541005 PYDC2Q56P42 97 aa10.02□□□□□ -0.81
LTBR-208ENST00000541005 SPANXN2Q5MJ10 180 aa10.02□□□□□ -0.81
LTBR-208ENST00000541005 IL34Q6ZMJ4 242 aa10.02□□□□□ -0.81
LTBR-208ENST00000541005 Q8N402 240 aa10.02□□□□□ -0.81
LTBR-208ENST00000541005 OR6Q1Q8NGQ2 317 aa10.02□□□□□ -0.81
LTBR-208ENST00000541005 EEF1AKMT3Q96AZ1 226 aa10.02□□□□□ -0.81
LTBR-208ENST00000541005 CXorf58Q96LI9 332 aa10.02□□□□□ -0.81
LTBR-208ENST00000541005 TMEM56Q96MV1 263 aa10.02□□□□□ -0.81
LTBR-208ENST00000541005 ELOVL1Q9BW60 279 aa10.02□□□□□ -0.81
LTBR-208ENST00000541005 TMEM222Q9H0R3 208 aa10.02□□□□□ -0.81
LTBR-208ENST00000541005 NAA60Q9H7X0 242 aa10.02□□□□□ -0.81
LTBR-208ENST00000541005 SIGLEC8Q9NYZ4 499 aa10.02□□□□□ -0.81
LTBR-208ENST00000541005 ZNF256Q9Y2P7 627 aaPredicted RBP10.02□□□□□ -0.81
LTBR-208ENST00000541005 TRBV7-1A0A0A6YYK4 115 aa10.01□□□□□ -0.81
LTBR-208ENST00000541005 CRYM-AS1A6NIL9 109 aa10.01□□□□□ -0.81
LTBR-208ENST00000541005 CYB5BO43169 146 aa10.01□□□□□ -0.81
LTBR-208ENST00000541005 CDS2O95674 445 aa10.01□□□□□ -0.81
LTBR-208ENST00000541005 OR5AC1P0C628 307 aa10.01□□□□□ -0.81
LTBR-208ENST00000541005 SYNJ2BPP57105 145 aa10.01□□□□□ -0.81
LTBR-208ENST00000541005 PRCDQ00LT1 54 aa10.01□□□□□ -0.81
LTBR-208ENST00000541005 ZNF114Q8NC26 417 aa10.01□□□□□ -0.81
LTBR-208ENST00000541005 OR4A16Q8NH70 328 aa10.01□□□□□ -0.81
LTBR-208ENST00000541005 GLYATL2Q8WU03 294 aa10.01□□□□□ -0.81
LTBR-208ENST00000541005 SCGB3A2Q96PL1 93 aa10.01□□□□□ -0.81
LTBR-208ENST00000541005 OR4C12Q96R67 309 aa10.01□□□□□ -0.81
LTBR-208ENST00000541005 THYN1Q9P016 225 aa10.01□□□□□ -0.81
LTBR-208ENST00000541005 F11RQ9Y624 299 aaKnown RBP10.01□□□□□ -0.81
LTBR-208ENST00000541005 MFSD2BA6NFX1 497 aa10□□□□□ -0.81
LTBR-208ENST00000541005 INS-IGF2F8WCM5 200 aa10□□□□□ -0.81
LTBR-208ENST00000541005 GGCTO75223 188 aaKnown RBP10□□□□□ -0.81
LTBR-208ENST00000541005 IGLV1-51P01701 117 aa10□□□□□ -0.81
LTBR-208ENST00000541005 AKR1C2P52895 323 aa10□□□□□ -0.81
LTBR-208ENST00000541005 MFAP2P55001 183 aa10□□□□□ -0.81
LTBR-208ENST00000541005 HSPE1P61604 102 aaKnown RBP10□□□□□ -0.81
LTBR-208ENST00000541005 DHODHQ02127 395 aa10□□□□□ -0.81
LTBR-208ENST00000541005 TATDN3Q17R31 274 aa10□□□□□ -0.81
LTBR-208ENST00000541005 TRIM16LQ309B1 348 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms