RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 BPIFA4PQ86YQ2 179 aa7.29□□□□□ -1.24
DDB1-217ENST00000540166 ZNF441Q8N8Z8 693 aa7.29□□□□□ -1.24
DDB1-217ENST00000540166 MDS2Q8NDY4 140 aa7.29□□□□□ -1.24
DDB1-217ENST00000540166 OR1F12Q8NHA8 337 aa7.29□□□□□ -1.24
DDB1-217ENST00000540166 OCC1Q8TAD7 63 aa7.29□□□□□ -1.24
DDB1-217ENST00000540166 SELENOKQ9Y6D0 94 aa7.29□□□□□ -1.24
DDB1-217ENST00000540166 CORTO00230 105 aa7.29□□□□□ -1.24
DDB1-217ENST00000540166 RHBDL1O75783 438 aa7.29□□□□□ -1.24
DDB1-217ENST00000540166 SRD5A2P31213 254 aa7.29□□□□□ -1.24
DDB1-217ENST00000540166 PAX9P55771 341 aa7.29□□□□□ -1.24
DDB1-217ENST00000540166 DSCR4P56555 118 aaPredicted RBP7.29□□□□□ -1.24
DDB1-217ENST00000540166 ZNF581Q9P0T4 197 aa7.29□□□□□ -1.24
DDB1-217ENST00000540166 USP9XQ93008 2570 aaPredicted RBP7.29□□□□□ -1.24
DDB1-217ENST00000540166 IGKV1D-13A0A0B4J2D9 117 aa7.29□□□□□ -1.24
DDB1-217ENST00000540166 A6NDN8 102 aa7.29□□□□□ -1.24
DDB1-217ENST00000540166 OR4C46A6NHA9 309 aa7.29□□□□□ -1.24
DDB1-217ENST00000540166 CXorf1O96002 111 aa7.29□□□□□ -1.24
DDB1-217ENST00000540166 CA2P00918 260 aa7.29□□□□□ -1.24
DDB1-217ENST00000540166 IGKV1-13P0DP09 117 aa7.29□□□□□ -1.24
DDB1-217ENST00000540166 GFRA1P56159 465 aa7.29□□□□□ -1.24
DDB1-217ENST00000540166 ARL16Q0P5N6 197 aa7.29□□□□□ -1.24
DDB1-217ENST00000540166 TMEM186Q96B77 213 aa7.29□□□□□ -1.24
DDB1-217ENST00000540166 LYZL4Q96KX0 146 aa7.29□□□□□ -1.24
DDB1-217ENST00000540166 HINT2Q9BX68 163 aa7.29□□□□□ -1.24
DDB1-217ENST00000540166 SCO2A0A1W2PP80 73 aa7.28□□□□□ -1.24
DDB1-217ENST00000540166 HELTA6NFD8 242 aa7.28□□□□□ -1.24
DDB1-217ENST00000540166 DEFA4P12838 97 aa7.28□□□□□ -1.24
DDB1-217ENST00000540166 ARF6P62330 175 aa7.28□□□□□ -1.24
DDB1-217ENST00000540166 RPL31P62899 125 aaKnown RBP7.28□□□□□ -1.24
DDB1-217ENST00000540166 FXYD3Q14802 87 aa7.28□□□□□ -1.24
DDB1-217ENST00000540166 OR10J3Q5JRS4 329 aa7.28□□□□□ -1.24
DDB1-217ENST00000540166 OR8B2Q96RD0 313 aa7.28□□□□□ -1.24
DDB1-217ENST00000540166 KIAA2026Q5HYC2 2103 aa7.28□□□□□ -1.24
DDB1-217ENST00000540166 IGHV2-26A0A0B4J1V2 119 aa7.28□□□□□ -1.24
DDB1-217ENST00000540166 FBLL1A6NHQ2 334 aaKnown RBP7.28□□□□□ -1.24
DDB1-217ENST00000540166 RBFOX2O43251 390 aaKnown RBP eCLIP7.28□□□□□ -1.247e-7■■□□□ 13.4
DDB1-217ENST00000540166 PCBD1P61457 104 aa7.28□□□□□ -1.24
DDB1-217ENST00000540166 CEACAM16Q2WEN9 425 aa7.28□□□□□ -1.24
DDB1-217ENST00000540166 LSM10Q969L4 123 aaKnown RBP7.28□□□□□ -1.24
DDB1-217ENST00000540166 TMEM70Q9BUB7 260 aa7.28□□□□□ -1.24
DDB1-217ENST00000540166 GNB1LQ9BYB4 327 aa7.28□□□□□ -1.24
DDB1-217ENST00000540166 SAP30LQ9HAJ7 183 aa7.28□□□□□ -1.24
DDB1-217ENST00000540166 USP9YO00507 2555 aaPredicted RBP7.28□□□□□ -1.24
DDB1-217ENST00000540166 ARHGAP21Q5T5U3 1957 aa7.28□□□□□ -1.24
DDB1-217ENST00000540166 F2Z2F3 143 aa7.28□□□□□ -1.24
DDB1-217ENST00000540166 MFAP2P55001 183 aa7.28□□□□□ -1.24
DDB1-217ENST00000540166 OR8B3Q8NGG8 313 aa7.28□□□□□ -1.24
DDB1-217ENST00000540166 OR5P3Q8WZ94 311 aa7.28□□□□□ -1.24
DDB1-217ENST00000540166 NPCDR1Q9BY65 106 aa7.28□□□□□ -1.24
DDB1-217ENST00000540166 FNDC4Q9H6D8 234 aaPredicted RBP7.28□□□□□ -1.24
DDB1-217ENST00000540166 A0A1W2PS18 150 aa7.27□□□□□ -1.25
DDB1-217ENST00000540166 CXCL13O43927 109 aa7.27□□□□□ -1.25
DDB1-217ENST00000540166 AMY1AP04745 511 aa7.27□□□□□ -1.25
DDB1-217ENST00000540166 ARL14EPLP0DKL9 152 aa7.27□□□□□ -1.25
DDB1-217ENST00000540166 COMPP49747 757 aaPredicted RBP7.27□□□□□ -1.25
DDB1-217ENST00000540166 LHX2P50458 406 aa7.27□□□□□ -1.25
DDB1-217ENST00000540166 PAX2Q02962 417 aa7.27□□□□□ -1.25
DDB1-217ENST00000540166 TFF3Q07654 80 aa7.27□□□□□ -1.25
DDB1-217ENST00000540166 RNF115Q9Y4L5 304 aa7.27□□□□□ -1.25
DDB1-217ENST00000540166 MUC21A0A0G2JKD1 596 aa7.27□□□□□ -1.25
DDB1-217ENST00000540166 MUC21A0A140T8X8 626 aa7.27□□□□□ -1.25
DDB1-217ENST00000540166 SMPD2O60906 423 aa7.27□□□□□ -1.25
DDB1-217ENST00000540166 GPM6AP51674 278 aa7.27□□□□□ -1.25
DDB1-217ENST00000540166 PLP2Q04941 152 aa7.27□□□□□ -1.25
DDB1-217ENST00000540166 SMAGPQ0VAQ4 97 aa7.27□□□□□ -1.25
DDB1-217ENST00000540166 MUC21Q5SSG8 566 aa7.27□□□□□ -1.25
DDB1-217ENST00000540166 NFAM1Q8NET5 270 aaPredicted RBP7.27□□□□□ -1.25
DDB1-217ENST00000540166 LINC01560Q8TB33 94 aa7.27□□□□□ -1.25
DDB1-217ENST00000540166 RNASE6Q93091 150 aaKnown RBP7.27□□□□□ -1.25
DDB1-217ENST00000540166 CLEC7AQ9BXN2 247 aa7.27□□□□□ -1.25
DDB1-217ENST00000540166 ATP23Q9Y6H3 246 aa7.27□□□□□ -1.25
DDB1-217ENST00000540166 DOCK7Q96N67 2140 aa7.27□□□□□ -1.25
DDB1-217ENST00000540166 C2CD3Q4AC94 2353 aa7.27□□□□□ -1.25
DDB1-217ENST00000540166 IGLC7A0M8Q6 106 aa7.27□□□□□ -1.25
DDB1-217ENST00000540166 C16orf97H3BN30 126 aa7.27□□□□□ -1.25
DDB1-217ENST00000540166 HTR1DP28221 377 aa7.27□□□□□ -1.25
DDB1-217ENST00000540166 FGFRL1Q8N441 504 aa7.27□□□□□ -1.25
DDB1-217ENST00000540166 ITLN2Q8WWU7 325 aaPredicted RBP7.27□□□□□ -1.25
DDB1-217ENST00000540166 FOXB1Q99853 325 aa7.27□□□□□ -1.25
DDB1-217ENST00000540166 A0A096LPE4 126 aa7.26□□□□□ -1.25
DDB1-217ENST00000540166 A0A0G2JRQ6 117 aa7.26□□□□□ -1.25
DDB1-217ENST00000540166 A0A1W2PPZ6 126 aa7.26□□□□□ -1.25
DDB1-217ENST00000540166 C7orf71A4D174 169 aa7.26□□□□□ -1.25
DDB1-217ENST00000540166 PPIAL4DF5H284 164 aa7.26□□□□□ -1.25
DDB1-217ENST00000540166 ACTL6BO94805 426 aa7.26□□□□□ -1.25
DDB1-217ENST00000540166 IGKV1D-33P01593 117 aa7.26□□□□□ -1.25
DDB1-217ENST00000540166 IGKV1-33P01594 117 aa7.26□□□□□ -1.25
DDB1-217ENST00000540166 SELENOVP59797 346 aa7.26□□□□□ -1.25
DDB1-217ENST00000540166 RPS20P60866 119 aaKnown RBP7.26□□□□□ -1.25
DDB1-217ENST00000540166 ERVK-16P61578 105 aa7.26□□□□□ -1.25
DDB1-217ENST00000540166 RHOBP62745 196 aa7.26□□□□□ -1.25
DDB1-217ENST00000540166 PSG9Q00887 426 aa7.26□□□□□ -1.25
DDB1-217ENST00000540166 MORN2Q502X0 79 aa7.26□□□□□ -1.25
DDB1-217ENST00000540166 SVIPQ8NHG7 77 aa7.26□□□□□ -1.25
DDB1-217ENST00000540166 ZNF837Q96EG3 531 aaPredicted RBP7.26□□□□□ -1.25
DDB1-217ENST00000540166 MAP1LC3CQ9BXW4 147 aa7.26□□□□□ -1.25
DDB1-217ENST00000540166 FAM90A26D6RGX4 464 aa7.26□□□□□ -1.25
DDB1-217ENST00000540166 BMPR1BO00238 502 aa7.26□□□□□ -1.25
DDB1-217ENST00000540166 TMPRSS2O15393 492 aa7.26□□□□□ -1.25
DDB1-217ENST00000540166 MRPL33O75394 65 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms