RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 MRPL52Q86TS9 123 aaKnown RBP12.32□□□□□ -0.44
DDB1-216ENST00000539739 RBMXL1Q96E39 390 aaKnown RBP12.32□□□□□ -0.44
DDB1-216ENST00000539739 GALNT14Q96FL9 552 aa12.32□□□□□ -0.44
DDB1-216ENST00000539739 OR2A7Q96R45 310 aa12.32□□□□□ -0.44
DDB1-216ENST00000539739 TP53RKQ96S44 253 aa12.32□□□□□ -0.44
DDB1-216ENST00000539739 SEC11CQ9BY50 192 aa12.32□□□□□ -0.44
DDB1-216ENST00000539739 TUBA4BQ9H853 241 aa12.32□□□□□ -0.44
DDB1-216ENST00000539739 PLEKHA2Q9HB19 425 aa12.32□□□□□ -0.44
DDB1-216ENST00000539739 HSBP1L1C9JCN9 74 aa12.31□□□□□ -0.44
DDB1-216ENST00000539739 NBR2O15453 112 aa12.31□□□□□ -0.44
DDB1-216ENST00000539739 GPR137BO60478 399 aa12.31□□□□□ -0.44
DDB1-216ENST00000539739 MT-ND4LP03901 98 aa12.31□□□□□ -0.44
DDB1-216ENST00000539739 OR5AC1P0C628 307 aa12.31□□□□□ -0.44
DDB1-216ENST00000539739 F2RL1P55085 397 aa12.31□□□□□ -0.44
DDB1-216ENST00000539739 SP6Q3SY56 376 aa12.31□□□□□ -0.44
DDB1-216ENST00000539739 NPBQ8NG41 125 aa12.31□□□□□ -0.44
DDB1-216ENST00000539739 RITA1Q96K30 269 aa12.31□□□□□ -0.44
DDB1-216ENST00000539739 TMEM222Q9H0R3 208 aa12.31□□□□□ -0.44
DDB1-216ENST00000539739 COMMD9Q9P000 198 aa12.31□□□□□ -0.44
DDB1-216ENST00000539739 FGF16O43320 207 aa12.3□□□□□ -0.44
DDB1-216ENST00000539739 SPDEFO95238 335 aa12.3□□□□□ -0.44
DDB1-216ENST00000539739 OR4E1P0C645 316 aa12.3□□□□□ -0.44
DDB1-216ENST00000539739 NQO2P16083 231 aa12.3□□□□□ -0.44
DDB1-216ENST00000539739 UCP1P25874 307 aa12.3□□□□□ -0.44
DDB1-216ENST00000539739 RPL15P61313 204 aaKnown RBP12.3□□□□□ -0.44
DDB1-216ENST00000539739 ERVK-16P61578 105 aa12.3□□□□□ -0.44
DDB1-216ENST00000539739 PLGLAQ15195 96 aa12.3□□□□□ -0.44
DDB1-216ENST00000539739 VMA21Q3ZAQ7 101 aa12.3□□□□□ -0.44
DDB1-216ENST00000539739 ZNF585BQ52M93 769 aa12.3□□□□□ -0.44
DDB1-216ENST00000539739 C2CD4CQ8TF44 421 aa12.3□□□□□ -0.44
DDB1-216ENST00000539739 RASL11BQ9BPW5 248 aa12.3□□□□□ -0.44
DDB1-216ENST00000539739 PIGBOS1A0A0B4J2F0 54 aa12.29□□□□□ -0.44
DDB1-216ENST00000539739 RRHO14718 337 aa12.29□□□□□ -0.44
DDB1-216ENST00000539739 S1PR2O95136 353 aa12.29□□□□□ -0.44
DDB1-216ENST00000539739 VSIG10L2P0DP72 767 aa12.29□□□□□ -0.44
DDB1-216ENST00000539739 CNTFRP26992 372 aa12.29□□□□□ -0.44
DDB1-216ENST00000539739 SUPT4H1P63272 117 aaKnown RBP12.29□□□□□ -0.44
DDB1-216ENST00000539739 PPP1R1AQ13522 171 aa12.29□□□□□ -0.44
DDB1-216ENST00000539739 PSG5Q15238 335 aa12.29□□□□□ -0.44
DDB1-216ENST00000539739 VSTM2AQ8TAG5 236 aa12.29□□□□□ -0.44
DDB1-216ENST00000539739 DTD1Q8TEA8 209 aa12.29□□□□□ -0.44
DDB1-216ENST00000539739 RHOVQ96L33 236 aa12.29□□□□□ -0.44
DDB1-216ENST00000539739 NOL4LQ96MY1 436 aaPredicted RBP12.29□□□□□ -0.44
DDB1-216ENST00000539739 BEX1Q9HBH7 125 aa12.29□□□□□ -0.44
DDB1-216ENST00000539739 JMJD1CQ15652 2540 aa12.29□□□□□ -0.44
DDB1-216ENST00000539739 FAM181BA6NEQ2 426 aa12.29□□□□□ -0.44
DDB1-216ENST00000539739 SRRM4A7MD48 611 aaKnown RBP12.29□□□□□ -0.44
DDB1-216ENST00000539739 COLCA2A8K830 154 aa12.29□□□□□ -0.44
DDB1-216ENST00000539739 SNRPGP15A8MWD9 76 aa12.29□□□□□ -0.44
DDB1-216ENST00000539739 CHST1O43916 411 aa12.29□□□□□ -0.44
DDB1-216ENST00000539739 MED6O75586 246 aa12.29□□□□□ -0.44
DDB1-216ENST00000539739 NDUFA3O95167 84 aa12.29□□□□□ -0.44
DDB1-216ENST00000539739 SFT2D2O95562 160 aa12.29□□□□□ -0.44
DDB1-216ENST00000539739 HLA-AP01891 365 aaKnown RBP12.29□□□□□ -0.44
DDB1-216ENST00000539739 UBE2KP61086 200 aa12.29□□□□□ -0.44
DDB1-216ENST00000539739 RPP30P78346 268 aaKnown RBP12.29□□□□□ -0.44
DDB1-216ENST00000539739 SRPXP78539 464 aa12.29□□□□□ -0.44
DDB1-216ENST00000539739 TMEM187Q14656 261 aa12.29□□□□□ -0.44
DDB1-216ENST00000539739 ALKAL2Q6UX46 152 aa12.29□□□□□ -0.44
DDB1-216ENST00000539739 C1QL4Q86Z23 238 aa12.29□□□□□ -0.44
DDB1-216ENST00000539739 ZNF695Q8IW36 515 aa12.29□□□□□ -0.44
DDB1-216ENST00000539739 Q8N9W7 124 aa12.29□□□□□ -0.44
DDB1-216ENST00000539739 TEX45Q8NA69 505 aa12.29□□□□□ -0.44
DDB1-216ENST00000539739 NPFFR1Q9GZQ6 430 aa12.29□□□□□ -0.44
DDB1-216ENST00000539739 SLC25A17O43808 307 aa12.28□□□□□ -0.44
DDB1-216ENST00000539739 CDS2O95674 445 aa12.28□□□□□ -0.44
DDB1-216ENST00000539739 KRASP01116 189 aa12.28□□□□□ -0.44
DDB1-216ENST00000539739 IGLV2-23P01705 113 aa12.28□□□□□ -0.44
DDB1-216ENST00000539739 S100A2P29034 98 aa12.28□□□□□ -0.44
DDB1-216ENST00000539739 MECP2P51608 486 aaKnown RBP12.28□□□□□ -0.44
DDB1-216ENST00000539739 DHRS2Q13268 280 aa12.28□□□□□ -0.44
DDB1-216ENST00000539739 C5orf64Q2M2E5 130 aa12.28□□□□□ -0.44
DDB1-216ENST00000539739 LYG2Q86SG7 212 aa12.28□□□□□ -0.44
DDB1-216ENST00000539739 LGI3Q8N145 548 aa12.28□□□□□ -0.44
DDB1-216ENST00000539739 FAM71E2Q8N5Q1 922 aa12.28□□□□□ -0.44
DDB1-216ENST00000539739 C5orf56Q8N8D9 126 aa12.28□□□□□ -0.44
DDB1-216ENST00000539739 CASTOR1Q8WTX7 329 aa12.28□□□□□ -0.44
DDB1-216ENST00000539739 FBXL15Q9H469 300 aa12.28□□□□□ -0.44
DDB1-216ENST00000539739 GPN1Q9HCN4 374 aaPredicted RBP12.28□□□□□ -0.44
DDB1-216ENST00000539739 IL5P05113 134 aa12.27□□□□□ -0.44
DDB1-216ENST00000539739 SAA1P0DJI8 122 aaPredicted RBP12.27□□□□□ -0.44
DDB1-216ENST00000539739 POU2AF1Q16633 256 aa12.27□□□□□ -0.44
DDB1-216ENST00000539739 VKORC1L1Q8N0U8 176 aa12.27□□□□□ -0.44
DDB1-216ENST00000539739 IL22RA2Q969J5 263 aa12.27□□□□□ -0.44
DDB1-216ENST00000539739 TMEM56Q96MV1 263 aa12.27□□□□□ -0.44
DDB1-216ENST00000539739 SIGLEC9Q9Y336 463 aa12.27□□□□□ -0.44
DDB1-216ENST00000539739 TMEM56-RWDD3S4R434 201 aa12.27□□□□□ -0.44
DDB1-216ENST00000539739 SETD2Q9BYW2 2564 aaPredicted RBP12.26□□□□□ -0.45
DDB1-216ENST00000539739 CUBNO60494 3623 aa12.26□□□□□ -0.45
DDB1-216ENST00000539739 A0A0D9SG52 128 aa12.26□□□□□ -0.45
DDB1-216ENST00000539739 CREBL2O60519 120 aaPredicted RBP12.26□□□□□ -0.45
DDB1-216ENST00000539739 IGKV1-39P01597 117 aa12.26□□□□□ -0.45
DDB1-216ENST00000539739 IGKV1D-39P04432 117 aa12.26□□□□□ -0.45
DDB1-216ENST00000539739 OR8U8P0C7N1 319 aa12.26□□□□□ -0.45
DDB1-216ENST00000539739 G6PCP35575 357 aa12.26□□□□□ -0.45
DDB1-216ENST00000539739 AKR1C2P52895 323 aa12.26□□□□□ -0.45
DDB1-216ENST00000539739 EIF5AP63241 154 aaKnown RBP12.26□□□□□ -0.45
DDB1-216ENST00000539739 TMEM268Q5VZI3 342 aa12.26□□□□□ -0.45
DDB1-216ENST00000539739 TMEM88Q6PEY1 159 aa12.26□□□□□ -0.45
DDB1-216ENST00000539739 CBLN2Q8IUK8 224 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms