RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 CX3CL1P78423 397 aa10.21□□□□□ -0.77
CCDC42-202ENST00000539522 FOXL1Q12952 345 aa10.21□□□□□ -0.77
CCDC42-202ENST00000539522 RAB32Q13637 225 aa10.21□□□□□ -0.77
CCDC42-202ENST00000539522 PRSS8Q16651 343 aa10.21□□□□□ -0.77
CCDC42-202ENST00000539522 VMA21Q3ZAQ7 101 aa10.21□□□□□ -0.77
CCDC42-202ENST00000539522 LRRC37A5PQ49AS3 106 aa10.21□□□□□ -0.77
CCDC42-202ENST00000539522 C9orf152Q5JTZ5 239 aa10.21□□□□□ -0.77
CCDC42-202ENST00000539522 C10orf55Q5SWW7 151 aa10.21□□□□□ -0.77
CCDC42-202ENST00000539522 ASPHD1Q5U4P2 390 aa10.21□□□□□ -0.77
CCDC42-202ENST00000539522 OR4A47Q6IF82 309 aa10.21□□□□□ -0.77
CCDC42-202ENST00000539522 PRSS54Q6PEW0 395 aa10.21□□□□□ -0.77
CCDC42-202ENST00000539522 Q6ZRM9 215 aa10.21□□□□□ -0.77
CCDC42-202ENST00000539522 ZNF546Q86UE3 836 aa10.21□□□□□ -0.77
CCDC42-202ENST00000539522 PPP1R27Q86WC6 154 aa10.21□□□□□ -0.77
CCDC42-202ENST00000539522 TEX45Q8NA69 505 aa10.21□□□□□ -0.77
CCDC42-202ENST00000539522 DMBX1Q8NFW5 382 aa10.21□□□□□ -0.77
CCDC42-202ENST00000539522 OR1S1Q8NH92 325 aa10.21□□□□□ -0.77
CCDC42-202ENST00000539522 RHOVQ96L33 236 aa10.21□□□□□ -0.77
CCDC42-202ENST00000539522 RASL11BQ9BPW5 248 aa10.21□□□□□ -0.77
CCDC42-202ENST00000539522 ZNF430Q9H8G1 570 aaPredicted RBP10.21□□□□□ -0.77
CCDC42-202ENST00000539522 KIAA1456Q9P272 454 aa10.21□□□□□ -0.77
CCDC42-202ENST00000539522 VWFP04275 2813 aa10.21□□□□□ -0.78
CCDC42-202ENST00000539522 MARCH11A6NNE9 402 aa10.2□□□□□ -0.78
CCDC42-202ENST00000539522 G3V318 75 aa10.2□□□□□ -0.78
CCDC42-202ENST00000539522 SOX15O60248 233 aa10.2□□□□□ -0.78
CCDC42-202ENST00000539522 KBTBD11O94819 623 aa10.2□□□□□ -0.78
CCDC42-202ENST00000539522 IGF1P05019 195 aa10.2□□□□□ -0.78
CCDC42-202ENST00000539522 OR9G9P0C7N8 305 aa10.2□□□□□ -0.78
CCDC42-202ENST00000539522 CRIP2P52943 208 aaPredicted RBP10.2□□□□□ -0.78
CCDC42-202ENST00000539522 IZUMO4Q1ZYL8 232 aa10.2□□□□□ -0.78
CCDC42-202ENST00000539522 SSX9Q7RTT3 188 aa10.2□□□□□ -0.78
CCDC42-202ENST00000539522 SLC35E3Q7Z769 313 aa10.2□□□□□ -0.78
CCDC42-202ENST00000539522 KLHDC1Q8N7A1 406 aa10.2□□□□□ -0.78
CCDC42-202ENST00000539522 TMEM167AQ8TBQ9 72 aa10.2□□□□□ -0.78
CCDC42-202ENST00000539522 FAM103A1Q9BTL3 118 aaKnown RBP10.2□□□□□ -0.78
CCDC42-202ENST00000539522 CACNG5Q9UF02 275 aa10.2□□□□□ -0.78
CCDC42-202ENST00000539522 FXYD6-FXYD2A0A087WZ82 144 aa10.19□□□□□ -0.78
CCDC42-202ENST00000539522 FAM90A26D6RGX4 464 aa10.19□□□□□ -0.78
CCDC42-202ENST00000539522 K7EPK0 472 aa10.19□□□□□ -0.78
CCDC42-202ENST00000539522 DEDDO75618 318 aa10.19□□□□□ -0.78
CCDC42-202ENST00000539522 C4BPBP20851 252 aa10.19□□□□□ -0.78
CCDC42-202ENST00000539522 PPIFP30405 207 aaKnown RBP10.19□□□□□ -0.78
CCDC42-202ENST00000539522 NUP62P37198 522 aaPredicted RBP10.19□□□□□ -0.78
CCDC42-202ENST00000539522 VDAC2P45880 294 aaPredicted RBP10.19□□□□□ -0.78
CCDC42-202ENST00000539522 S100A10P60903 97 aa10.19□□□□□ -0.78
CCDC42-202ENST00000539522 LGALSLQ3ZCW2 172 aaPredicted RBP10.19□□□□□ -0.78
CCDC42-202ENST00000539522 CXorf66Q5JRM2 361 aaPredicted RBP10.19□□□□□ -0.78
CCDC42-202ENST00000539522 ZNF562Q6V9R5 426 aa10.19□□□□□ -0.78
CCDC42-202ENST00000539522 STPG2Q8N412 459 aa10.19□□□□□ -0.78
CCDC42-202ENST00000539522 INO80EQ8NBZ0 244 aaPredicted RBP10.19□□□□□ -0.78
CCDC42-202ENST00000539522 OR4A16Q8NH70 328 aa10.19□□□□□ -0.78
CCDC42-202ENST00000539522 OR2T6Q8NHC8 308 aa10.19□□□□□ -0.78
CCDC42-202ENST00000539522 VSTM2AQ8TAG5 236 aa10.19□□□□□ -0.78
CCDC42-202ENST00000539522 TMEM140Q9NV12 185 aa10.19□□□□□ -0.78
CCDC42-202ENST00000539522 BET1LQ9NYM9 111 aa10.19□□□□□ -0.78
CCDC42-202ENST00000539522 A0A0D9SG52 128 aa10.18□□□□□ -0.78
CCDC42-202ENST00000539522 ADARB2-AS1A8MUL3 147 aa10.18□□□□□ -0.78
CCDC42-202ENST00000539522 TEX22C9J3V5 150 aa10.18□□□□□ -0.78
CCDC42-202ENST00000539522 E5RGE8 158 aa10.18□□□□□ -0.78
CCDC42-202ENST00000539522 H0YIZ8 118 aa10.18□□□□□ -0.78
CCDC42-202ENST00000539522 HAX1O00165 279 aa10.18□□□□□ -0.78
CCDC42-202ENST00000539522 UPK2O00526 184 aa10.18□□□□□ -0.78
CCDC42-202ENST00000539522 MED6O75586 246 aa10.18□□□□□ -0.78
CCDC42-202ENST00000539522 SCGB1D2O95969 90 aa10.18□□□□□ -0.78
CCDC42-202ENST00000539522 PVALBP20472 110 aaPredicted RBP10.18□□□□□ -0.78
CCDC42-202ENST00000539522 PLGLAQ15195 96 aa10.18□□□□□ -0.78
CCDC42-202ENST00000539522 LAMTOR1Q6IAA8 161 aa10.18□□□□□ -0.78
CCDC42-202ENST00000539522 ACOT7LQ6ZUV0 252 aa10.18□□□□□ -0.78
CCDC42-202ENST00000539522 ZNF329Q86UD4 541 aa10.18□□□□□ -0.78
CCDC42-202ENST00000539522 FOXRED2Q8IWF2 684 aa10.18□□□□□ -0.78
CCDC42-202ENST00000539522 OR4A5Q8NH83 315 aa10.18□□□□□ -0.78
CCDC42-202ENST00000539522 CITED1Q99966 193 aa10.18□□□□□ -0.78
CCDC42-202ENST00000539522 MFFQ9GZY8 342 aa10.18□□□□□ -0.78
CCDC42-202ENST00000539522 MBD2Q9UBB5 411 aa10.18□□□□□ -0.78
CCDC42-202ENST00000539522 ZNF580Q9UK33 172 aa10.18□□□□□ -0.78
CCDC42-202ENST00000539522 TNFSF18Q9UNG2 199 aa10.18□□□□□ -0.78
CCDC42-202ENST00000539522 NSG2Q9Y328 171 aa10.18□□□□□ -0.78
CCDC42-202ENST00000539522 LSM5Q9Y4Y9 91 aaKnown RBP10.18□□□□□ -0.78
CCDC42-202ENST00000539522 WRBO00258 174 aa10.17□□□□□ -0.78
CCDC42-202ENST00000539522 ARPC5O15511 151 aa10.17□□□□□ -0.78
CCDC42-202ENST00000539522 RBMXL2O75526 392 aaKnown RBP10.17□□□□□ -0.78
CCDC42-202ENST00000539522 CD28P10747 220 aa10.17□□□□□ -0.78
CCDC42-202ENST00000539522 OR2F1Q13607 317 aa10.17□□□□□ -0.78
CCDC42-202ENST00000539522 FXYD3Q14802 87 aa10.17□□□□□ -0.78
CCDC42-202ENST00000539522 AARDQ4LEZ3 155 aa10.17□□□□□ -0.78
CCDC42-202ENST00000539522 C9orf62Q8N4C0 152 aa10.17□□□□□ -0.78
CCDC42-202ENST00000539522 OR52E5Q8NH55 327 aa10.17□□□□□ -0.78
CCDC42-202ENST00000539522 GRPEL2Q8TAA5 225 aa10.17□□□□□ -0.78
CCDC42-202ENST00000539522 DCUN1D4Q92564 292 aa10.17□□□□□ -0.78
CCDC42-202ENST00000539522 RAB40CQ96S21 281 aa10.17□□□□□ -0.78
CCDC42-202ENST00000539522 ZNF747Q9BV97 191 aa10.17□□□□□ -0.78
CCDC42-202ENST00000539522 PARP11Q9NR21 331 aa10.17□□□□□ -0.78
CCDC42-202ENST00000539522 FKBP11Q9NYL4 201 aa10.17□□□□□ -0.78
CCDC42-202ENST00000539522 OR5AC2Q9NZP5 309 aa10.17□□□□□ -0.78
CCDC42-202ENST00000539522 HSPB11Q9Y547 144 aa10.17□□□□□ -0.78
CCDC42-202ENST00000539522 WSB1Q9Y6I7 421 aa10.17□□□□□ -0.78
CCDC42-202ENST00000539522 A0A1B0GUS0 222 aa10.16□□□□□ -0.78
CCDC42-202ENST00000539522 L7N2F9 121 aa10.16□□□□□ -0.78
CCDC42-202ENST00000539522 SYNGR2O43760 224 aa10.16□□□□□ -0.78
CCDC42-202ENST00000539522 LY86O95711 162 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms