RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 CLEC7AQ9BXN2 247 aa12.24□□□□□ -0.45
CACNB1-206ENST00000539338 IGFBP2P18065 325 aa12.23□□□□□ -0.45
CACNB1-206ENST00000539338 ZNF502Q8TBZ5 544 aa12.23□□□□□ -0.45
CACNB1-206ENST00000539338 MED12Q93074 2177 aa12.23□□□□□ -0.45
CACNB1-206ENST00000539338 SLC17A3O00476 420 aa12.23□□□□□ -0.45
CACNB1-206ENST00000539338 LINC00305Q7Z4B0 112 aa12.23□□□□□ -0.45
CACNB1-206ENST00000539338 KLHDC3Q9BQ90 382 aa12.23□□□□□ -0.45
CACNB1-206ENST00000539338 OR4A47Q6IF82 309 aa12.23□□□□□ -0.45
CACNB1-206ENST00000539338 LOC105371267A0A1B0GV96 52 aa12.22□□□□□ -0.45
CACNB1-206ENST00000539338 IL18BPO95998 194 aa12.22□□□□□ -0.45
CACNB1-206ENST00000539338 ATP5G3P48201 142 aa12.22□□□□□ -0.45
CACNB1-206ENST00000539338 OR10J6PQ8NGY7 276 aa12.22□□□□□ -0.45
CACNB1-206ENST00000539338 GATAD1Q8WUU5 269 aa12.22□□□□□ -0.45
CACNB1-206ENST00000539338 ARHGEF17Q96PE2 2063 aaPredicted RBP12.22□□□□□ -0.45
CACNB1-206ENST00000539338 LOC105371242A0A075B767 164 aa12.22□□□□□ -0.45
CACNB1-206ENST00000539338 TFF1P04155 84 aa12.22□□□□□ -0.45
CACNB1-206ENST00000539338 COMPP49747 757 aaPredicted RBP12.22□□□□□ -0.45
CACNB1-206ENST00000539338 RNFT1Q5M7Z0 435 aa12.22□□□□□ -0.45
CACNB1-206ENST00000539338 CLDND2Q8NHS1 167 aa12.22□□□□□ -0.45
CACNB1-206ENST00000539338 C18orf12Q96KH6 178 aa12.22□□□□□ -0.45
CACNB1-206ENST00000539338 MRPL32Q9BYC8 188 aaKnown RBP12.22□□□□□ -0.45
CACNB1-206ENST00000539338 DEPPQ9NTK1 212 aa12.22□□□□□ -0.45
CACNB1-206ENST00000539338 RALGAPA1Q6GYQ0 2036 aa12.22□□□□□ -0.45
CACNB1-206ENST00000539338 IGHV2OR16-5A0A0B4J2B6 119 aa12.22□□□□□ -0.45
CACNB1-206ENST00000539338 PMCHL1Q16048 86 aa12.22□□□□□ -0.45
CACNB1-206ENST00000539338 ZNF525Q8N782 197 aa12.22□□□□□ -0.45
CACNB1-206ENST00000539338 C19orf24Q9BVV8 132 aa12.22□□□□□ -0.45
CACNB1-206ENST00000539338 RALYQ9UKM9 306 aaKnown RBP12.22□□□□□ -0.45
CACNB1-206ENST00000539338 DMRT1Q9Y5R6 373 aa12.22□□□□□ -0.45
CACNB1-206ENST00000539338 SCN8AQ9UQD0 1980 aa12.22□□□□□ -0.45
CACNB1-206ENST00000539338 TM4SF20Q53R12 229 aa12.22□□□□□ -0.45
CACNB1-206ENST00000539338 FBLN5Q9UBX5 448 aa12.22□□□□□ -0.45
CACNB1-206ENST00000539338 S4R3C0 116 aa12.22□□□□□ -0.45
CACNB1-206ENST00000539338 TMEM56-RWDD3S4R434 201 aa12.22□□□□□ -0.45
CACNB1-206ENST00000539338 CACNA1DQ01668 2161 aa12.22□□□□□ -0.45
CACNB1-206ENST00000539338 SCO2A0A1W2PP80 73 aa12.21□□□□□ -0.45
CACNB1-206ENST00000539338 EFNA2O43921 213 aa12.21□□□□□ -0.45
CACNB1-206ENST00000539338 LHX2P50458 406 aa12.21□□□□□ -0.45
CACNB1-206ENST00000539338 CYP2G1PQ6ZSU1 146 aa12.21□□□□□ -0.45
CACNB1-206ENST00000539338 ATG101Q9BSB4 218 aa12.21□□□□□ -0.45
CACNB1-206ENST00000539338 C7orf69Q9H7B7 122 aa12.21□□□□□ -0.45
CACNB1-206ENST00000539338 SCN5AQ14524 2016 aa12.21□□□□□ -0.45
CACNB1-206ENST00000539338 H3BVH4 76 aa12.21□□□□□ -0.45
CACNB1-206ENST00000539338 CCL1P22362 96 aa12.21□□□□□ -0.45
CACNB1-206ENST00000539338 CA7P43166 264 aa12.21□□□□□ -0.45
CACNB1-206ENST00000539338 TMEM183AQ8IXX5 376 aa12.21□□□□□ -0.45
CACNB1-206ENST00000539338 IMMP2LQ96T52 175 aa12.21□□□□□ -0.45
CACNB1-206ENST00000539338 UQCR10Q9UDW1 63 aa12.21□□□□□ -0.45
CACNB1-206ENST00000539338 VENTXO95231 258 aa12.21□□□□□ -0.45
CACNB1-206ENST00000539338 IL4P05112 153 aa12.21□□□□□ -0.45
CACNB1-206ENST00000539338 C2orf83Q53S99 150 aa12.21□□□□□ -0.45
CACNB1-206ENST00000539338 FREM3P0C091 2139 aa12.21□□□□□ -0.46
CACNB1-206ENST00000539338 M0R3E3 92 aa12.21□□□□□ -0.46
CACNB1-206ENST00000539338 FGFBP3Q8TAT2 258 aa12.21□□□□□ -0.46
CACNB1-206ENST00000539338 ESPL1Q14674 2120 aa12.21□□□□□ -0.46
CACNB1-206ENST00000539338 IGHV3OR16-13A0A075B7E8 117 aa12.2□□□□□ -0.46
CACNB1-206ENST00000539338 TRBV6-7A0A0A0MS04 114 aa12.2□□□□□ -0.46
CACNB1-206ENST00000539338 IGHV3-74A0A0B4J1X5 117 aa12.2□□□□□ -0.46
CACNB1-206ENST00000539338 ZNF207O43670 478 aaKnown RBP12.2□□□□□ -0.46
CACNB1-206ENST00000539338 IFI27L2Q9H2X8 130 aa12.2□□□□□ -0.46
CACNB1-206ENST00000539338 SPTBN2O15020 2390 aa12.2□□□□□ -0.46
CACNB1-206ENST00000539338 HEATR5BQ9P2D3 2071 aa12.2□□□□□ -0.46
CACNB1-206ENST00000539338 LOC102723996A0A087X1L8 192 aa12.2□□□□□ -0.46
CACNB1-206ENST00000539338 ANOS1P23352 680 aa12.2□□□□□ -0.46
CACNB1-206ENST00000539338 GATA2P23769 480 aaPredicted RBP12.2□□□□□ -0.46
CACNB1-206ENST00000539338 FOXA3P55318 350 aaPredicted RBP12.2□□□□□ -0.46
CACNB1-206ENST00000539338 FAM89BQ8N5H3 189 aa12.2□□□□□ -0.46
CACNB1-206ENST00000539338 WDYHV1Q96HA8 205 aa12.2□□□□□ -0.46
CACNB1-206ENST00000539338 OR1N2Q8NGR9 330 aa12.2□□□□□ -0.46
CACNB1-206ENST00000539338 NPFFR1Q9GZQ6 430 aa12.2□□□□□ -0.46
CACNB1-206ENST00000539338 LIPFP07098 398 aa12.2□□□□□ -0.46
CACNB1-206ENST00000539338 LY6EQ16553 131 aa12.2□□□□□ -0.46
CACNB1-206ENST00000539338 TMEM30BQ3MIR4 351 aa12.2□□□□□ -0.46
CACNB1-206ENST00000539338 TMEM106BQ9NUM4 274 aa12.2□□□□□ -0.46
CACNB1-206ENST00000539338 AUP1Q9Y679 476 aa12.2□□□□□ -0.46
CACNB1-206ENST00000539338 CNOT1A5YKK6 2376 aaKnown RBP12.19□□□□□ -0.46
CACNB1-206ENST00000539338 COTL1Q14019 142 aa12.19□□□□□ -0.46
CACNB1-206ENST00000539338 IGHV3OR16-10A0A075B7F0 116 aa12.19□□□□□ -0.46
CACNB1-206ENST00000539338 TRAV30A0A087WSZ9 112 aa12.19□□□□□ -0.46
CACNB1-206ENST00000539338 SIAH2O43255 324 aa12.19□□□□□ -0.46
CACNB1-206ENST00000539338 FOLR2P14207 255 aa12.19□□□□□ -0.46
CACNB1-206ENST00000539338 CX3CL1P78423 397 aa12.19□□□□□ -0.46
CACNB1-206ENST00000539338 C9orf106Q8NAJ2 232 aa12.19□□□□□ -0.46
CACNB1-206ENST00000539338 IGKV3D-15A0A087WSY6 115 aa12.19□□□□□ -0.46
CACNB1-206ENST00000539338 IGLV3-32A0A0A0MS00 114 aa12.19□□□□□ -0.46
CACNB1-206ENST00000539338 PINLYPA6NC86 204 aa12.19□□□□□ -0.46
CACNB1-206ENST00000539338 CRXO43186 299 aaPredicted RBP12.19□□□□□ -0.46
CACNB1-206ENST00000539338 IGKV3-15P01624 115 aa12.19□□□□□ -0.46
CACNB1-206ENST00000539338 DNM1P46Q6ZS02 220 aa12.19□□□□□ -0.46
CACNB1-206ENST00000539338 FBXL15Q9H469 300 aa12.19□□□□□ -0.46
CACNB1-206ENST00000539338 IGHV3-23P01764 117 aa12.19□□□□□ -0.46
CACNB1-206ENST00000539338 PSG9Q00887 426 aa12.19□□□□□ -0.46
CACNB1-206ENST00000539338 MBNL2Q5VZF2 373 aaKnown RBP12.19□□□□□ -0.46
CACNB1-206ENST00000539338 PET117Q6UWS5 81 aa12.19□□□□□ -0.46
CACNB1-206ENST00000539338 KBTBD11-OT1A0A1B0GTJ5 212 aa12.18□□□□□ -0.46
CACNB1-206ENST00000539338 NPIPB11E5RHQ5 1161 aa12.18□□□□□ -0.46
CACNB1-206ENST00000539338 RELQ04864 619 aaPredicted RBP12.18□□□□□ -0.46
CACNB1-206ENST00000539338 IQCF6A8MYZ5 107 aa12.18□□□□□ -0.46
CACNB1-206ENST00000539338 CD55P08174 381 aa12.18□□□□□ -0.46
CACNB1-206ENST00000539338 SDF2L1Q9HCN8 221 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms