RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 OR10W1Q8NGF6 305 aa16.74■□□□□ 0.27
SCARB1-206ENST00000539320 OR1L8Q8NGR8 309 aa16.74■□□□□ 0.27
SCARB1-206ENST00000539320 DGCR14Q96DF8 476 aaKnown RBP16.74■□□□□ 0.27
SCARB1-206ENST00000539320 WDR89Q96FK6 387 aaPredicted RBP16.74■□□□□ 0.27
SCARB1-206ENST00000539320 CMTM3Q96MX0 182 aa16.74■□□□□ 0.27
SCARB1-206ENST00000539320 SCPEP1Q9HB40 452 aa16.74■□□□□ 0.27
SCARB1-206ENST00000539320 CEPT1Q9Y6K0 416 aa16.74■□□□□ 0.27
SCARB1-206ENST00000539320 STARD9Q9P2P6 4700 aa16.74■□□□□ 0.27
SCARB1-206ENST00000539320 CYB5BO43169 146 aa16.73■□□□□ 0.27
SCARB1-206ENST00000539320 CLEC3BP05452 202 aa16.73■□□□□ 0.27
SCARB1-206ENST00000539320 CBLN1P23435 193 aa16.73■□□□□ 0.27
SCARB1-206ENST00000539320 LPAR6P43657 344 aa16.73■□□□□ 0.27
SCARB1-206ENST00000539320 SNX29P2Q8IUI4 249 aa16.73■□□□□ 0.27
SCARB1-206ENST00000539320 FCAMRQ8WWV6 532 aa16.73■□□□□ 0.27
SCARB1-206ENST00000539320 SMIM31A0A1B0GVY4 71 aa16.72■□□□□ 0.27
SCARB1-206ENST00000539320 IFNA6P05013 189 aa16.72■□□□□ 0.27
SCARB1-206ENST00000539320 OR13C7P0DN81 318 aa16.72■□□□□ 0.27
SCARB1-206ENST00000539320 RCVRNP35243 200 aa16.72■□□□□ 0.27
SCARB1-206ENST00000539320 ZNF57Q68EA5 555 aaPredicted RBP16.72■□□□□ 0.27
SCARB1-206ENST00000539320 LYSMD2Q8IV50 215 aa16.72■□□□□ 0.27
SCARB1-206ENST00000539320 CADM3Q8N126 398 aa16.72■□□□□ 0.27
SCARB1-206ENST00000539320 LSM10Q969L4 123 aaKnown RBP16.72■□□□□ 0.27
SCARB1-206ENST00000539320 WFDC10AQ9H1F0 79 aa16.72■□□□□ 0.27
SCARB1-206ENST00000539320 RYR2Q92736 4967 aa16.71■□□□□ 0.27
SCARB1-206ENST00000539320 TEX50A0A1B0GTY4 177 aa16.71■□□□□ 0.27
SCARB1-206ENST00000539320 KRASP01116 189 aa16.71■□□□□ 0.27
SCARB1-206ENST00000539320 PTBP1P26599 531 aaKnown RBP eCLIP16.71■□□□□ 0.275e-7■■■■■ 52.1
SCARB1-206ENST00000539320 S100GP29377 79 aa16.71■□□□□ 0.27
SCARB1-206ENST00000539320 G6PCP35575 357 aa16.71■□□□□ 0.27
SCARB1-206ENST00000539320 WT1-ASQ06250 92 aa16.71■□□□□ 0.27
SCARB1-206ENST00000539320 ZNF585BQ52M93 769 aa16.71■□□□□ 0.27
SCARB1-206ENST00000539320 PHLDA2Q53GA4 152 aa16.71■□□□□ 0.27
SCARB1-206ENST00000539320 LINC00322Q6ZN03 302 aaPredicted RBP16.71■□□□□ 0.27
SCARB1-206ENST00000539320 TMEM61Q8N0U2 210 aa16.71■□□□□ 0.27
SCARB1-206ENST00000539320 DEFB125Q8N687 156 aa16.71■□□□□ 0.27
SCARB1-206ENST00000539320 UXS1Q8NBZ7 420 aa16.71■□□□□ 0.27
SCARB1-206ENST00000539320 VN1R17PQ8TDU5 208 aa16.71■□□□□ 0.27
SCARB1-206ENST00000539320 HINT2Q9BX68 163 aa16.71■□□□□ 0.27
SCARB1-206ENST00000539320 SRD5A3Q9H8P0 318 aa16.71■□□□□ 0.27
SCARB1-206ENST00000539320 MLXQ9UH92 298 aa16.71■□□□□ 0.27
SCARB1-206ENST00000539320 NSG2Q9Y328 171 aa16.71■□□□□ 0.27
SCARB1-206ENST00000539320 SELENOKQ9Y6D0 94 aa16.71■□□□□ 0.27
SCARB1-206ENST00000539320 SNAPC5O75971 98 aa16.7■□□□□ 0.26
SCARB1-206ENST00000539320 SERPINE2P07093 398 aa16.7■□□□□ 0.26
SCARB1-206ENST00000539320 TSPAN5P62079 268 aa16.7■□□□□ 0.26
SCARB1-206ENST00000539320 ZFAND6Q6FIF0 208 aa16.7■□□□□ 0.26
SCARB1-206ENST00000539320 PLET1Q6UQ28 207 aa16.7■□□□□ 0.26
SCARB1-206ENST00000539320 UNQ9165/PRO28630Q6UXU0 137 aa16.7■□□□□ 0.26
SCARB1-206ENST00000539320 SLC16A13Q7RTY0 426 aa16.7■□□□□ 0.26
SCARB1-206ENST00000539320 MARC2Q969Z3 335 aa16.7■□□□□ 0.26
SCARB1-206ENST00000539320 RETNQ9HD89 108 aa16.7■□□□□ 0.26
SCARB1-206ENST00000539320 NDUFA4L2Q9NRX3 87 aa16.7■□□□□ 0.26
SCARB1-206ENST00000539320 PRNDQ9UKY0 176 aa16.7■□□□□ 0.26
SCARB1-206ENST00000539320 OR51B2Q9Y5P1 312 aa16.7■□□□□ 0.26
SCARB1-206ENST00000539320 F11RQ9Y624 299 aaKnown RBP16.7■□□□□ 0.26
SCARB1-206ENST00000539320 OR11H12B2RN74 326 aa16.69■□□□□ 0.26
SCARB1-206ENST00000539320 TGOLN2O43493 480 aa16.69■□□□□ 0.26
SCARB1-206ENST00000539320 HPGDSO60760 199 aa16.69■□□□□ 0.26
SCARB1-206ENST00000539320 ELK1P19419 428 aa16.69■□□□□ 0.26
SCARB1-206ENST00000539320 TM4SF20Q53R12 229 aa16.69■□□□□ 0.26
SCARB1-206ENST00000539320 SLC25A24Q6NUK1 477 aa16.69■□□□□ 0.26
SCARB1-206ENST00000539320 LPCAT3Q6P1A2 487 aa16.69■□□□□ 0.26
SCARB1-206ENST00000539320 BTNL8Q6UX41 500 aa16.69■□□□□ 0.26
SCARB1-206ENST00000539320 IGHV3-35A0A0C4DH35 117 aa16.68■□□□□ 0.26
SCARB1-206ENST00000539320 OR5B3Q8NH48 314 aa16.68■□□□□ 0.26
SCARB1-206ENST00000539320 TMEM190Q8WZ59 177 aa16.68■□□□□ 0.26
SCARB1-206ENST00000539320 TSC22D3Q99576 134 aa16.68■□□□□ 0.26
SCARB1-206ENST00000539320 HIPK2Q9H2X6 1198 aa16.68■□□□□ 0.26
SCARB1-206ENST00000539320 FAM212BQ9NTI7 297 aaPredicted RBP16.68■□□□□ 0.26
SCARB1-206ENST00000539320 UFC1Q9Y3C8 167 aa16.68■□□□□ 0.26
SCARB1-206ENST00000539320 RBMY1BA6NDE4 496 aaKnown RBP16.67■□□□□ 0.26
SCARB1-206ENST00000539320 RBMY1EA6NEQ0 496 aaKnown RBP16.67■□□□□ 0.26
SCARB1-206ENST00000539320 C15orf61A6NNL5 157 aa16.67■□□□□ 0.26
SCARB1-206ENST00000539320 RBMY1DP0C7P1 496 aaKnown RBP16.67■□□□□ 0.26
SCARB1-206ENST00000539320 RORCP51449 518 aa16.67■□□□□ 0.26
SCARB1-206ENST00000539320 ELLP55199 621 aaPredicted RBP16.67■□□□□ 0.26
SCARB1-206ENST00000539320 TBC1D26Q86UD7 250 aa16.67■□□□□ 0.26
SCARB1-206ENST00000539320 SLC38A6Q8IZM9 456 aa16.67■□□□□ 0.26
SCARB1-206ENST00000539320 ZNF436Q9C0F3 470 aaPredicted RBP16.67■□□□□ 0.26
SCARB1-206ENST00000539320 FKBP11Q9NYL4 201 aa16.67■□□□□ 0.26
SCARB1-206ENST00000539320 TENM2Q9NT68 2774 aa16.66■□□□□ 0.26
SCARB1-206ENST00000539320 OR2T8A6NH00 312 aa16.66■□□□□ 0.26
SCARB1-206ENST00000539320 SCAF4O95104 1147 aaKnown RBP16.66■□□□□ 0.26
SCARB1-206ENST00000539320 GABARAPO95166 117 aa16.66■□□□□ 0.26
SCARB1-206ENST00000539320 SMIM18P0DKX4 95 aa16.66■□□□□ 0.26
SCARB1-206ENST00000539320 C8orf88P0DMB2 117 aa16.66■□□□□ 0.26
SCARB1-206ENST00000539320 MFAP2P55001 183 aa16.66■□□□□ 0.26
SCARB1-206ENST00000539320 MZT2AQ6P582 158 aa16.66■□□□□ 0.26
SCARB1-206ENST00000539320 OR52B4Q8NGK2 314 aa16.66■□□□□ 0.26
SCARB1-206ENST00000539320 BSCL2Q96G97 398 aaPredicted RBP16.66■□□□□ 0.26
SCARB1-206ENST00000539320 TMEM56Q96MV1 263 aa16.66■□□□□ 0.26
SCARB1-206ENST00000539320 FAM110AQ9BQ89 295 aa16.66■□□□□ 0.26
SCARB1-206ENST00000539320 TMEM14BQ9NUH8 114 aa16.66■□□□□ 0.26
SCARB1-206ENST00000539320 C21orf62Q9NYP8 219 aa16.66■□□□□ 0.26
SCARB1-206ENST00000539320 MRPL27Q9P0M9 148 aaKnown RBP16.66■□□□□ 0.26
SCARB1-206ENST00000539320 TRAV25A0A0B4J276 109 aa16.65■□□□□ 0.26
SCARB1-206ENST00000539320 DBX1A6NMT0 343 aa16.65■□□□□ 0.26
SCARB1-206ENST00000539320 FAM25AB3EWG3 89 aa16.65■□□□□ 0.26
SCARB1-206ENST00000539320 FAM25CB3EWG5 89 aa16.65■□□□□ 0.26
SCARB1-206ENST00000539320 FAM25GB3EWG6 89 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms