RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 SMAD7O15105 426 aaKnown RBP10.32□□□□□ -0.76
USP3-203ENST00000538686 PRKNO60260 465 aaPredicted RBP10.32□□□□□ -0.76
USP3-203ENST00000538686 SPATA31B1PQ5VZV4 182 aa10.32□□□□□ -0.76
USP3-203ENST00000538686 NAA38Q9BRA0 125 aaKnown RBP10.32□□□□□ -0.76
USP3-203ENST00000538686 ANAPC13Q9BS18 74 aa10.32□□□□□ -0.76
USP3-203ENST00000538686 SPXQ9BT56 116 aa10.32□□□□□ -0.76
USP3-203ENST00000538686 FGF22Q9HCT0 170 aa10.32□□□□□ -0.76
USP3-203ENST00000538686 R4GN57 208 aa10.32□□□□□ -0.76
USP3-203ENST00000538686 ARHGAP21Q5T5U3 1957 aa10.32□□□□□ -0.76
USP3-203ENST00000538686 GTF3C1Q12789 2109 aa10.32□□□□□ -0.76
USP3-203ENST00000538686 TEX50A0A1B0GTY4 177 aa10.32□□□□□ -0.76
USP3-203ENST00000538686 H0YIG0 161 aa10.32□□□□□ -0.76
USP3-203ENST00000538686 PVRP15151 417 aa10.32□□□□□ -0.76
USP3-203ENST00000538686 GCSAMLQ5JQS6 135 aa10.32□□□□□ -0.76
USP3-203ENST00000538686 TEPPQ6URK8 271 aa10.32□□□□□ -0.76
USP3-203ENST00000538686 SSX8Q7RTT4 187 aa10.32□□□□□ -0.76
USP3-203ENST00000538686 NUDT22Q9BRQ3 303 aa10.32□□□□□ -0.76
USP3-203ENST00000538686 VCX2Q9H322 139 aa10.32□□□□□ -0.76
USP3-203ENST00000538686 HILPDAQ9Y5L2 63 aa10.32□□□□□ -0.76
USP3-203ENST00000538686 A0A1W2PRD5 423 aa10.31□□□□□ -0.76
USP3-203ENST00000538686 A0A1W2PRF3 423 aa10.31□□□□□ -0.76
USP3-203ENST00000538686 A0A1W2PRM7 423 aa10.31□□□□□ -0.76
USP3-203ENST00000538686 PRR33A8MZF0 331 aa10.31□□□□□ -0.76
USP3-203ENST00000538686 RRHO14718 337 aa10.31□□□□□ -0.76
USP3-203ENST00000538686 P04436 131 aa10.31□□□□□ -0.76
USP3-203ENST00000538686 TAS2R45P59539 299 aa10.31□□□□□ -0.76
USP3-203ENST00000538686 PDCD1Q15116 288 aa10.31□□□□□ -0.76
USP3-203ENST00000538686 RTL8BQ17RB0 113 aa10.31□□□□□ -0.76
USP3-203ENST00000538686 PSMG4Q5JS54 123 aa10.31□□□□□ -0.76
USP3-203ENST00000538686 WIPI1Q5MNZ9 446 aaPredicted RBP10.31□□□□□ -0.76
USP3-203ENST00000538686 SPEM1Q8N4L4 309 aa10.31□□□□□ -0.76
USP3-203ENST00000538686 ATP6V0E2Q8NHE4 81 aa10.31□□□□□ -0.76
USP3-203ENST00000538686 GTSF1Q8WW33 167 aa10.31□□□□□ -0.76
USP3-203ENST00000538686 TMEM54Q969K7 222 aa10.31□□□□□ -0.76
USP3-203ENST00000538686 HARBI1Q96MB7 349 aa10.31□□□□□ -0.76
USP3-203ENST00000538686 SLC25A10Q9UBX3 287 aaPredicted RBP10.31□□□□□ -0.76
USP3-203ENST00000538686 RALYQ9UKM9 306 aaKnown RBP10.31□□□□□ -0.76
USP3-203ENST00000538686 SOX21Q9Y651 276 aaPredicted RBP10.31□□□□□ -0.76
USP3-203ENST00000538686 TNFRSF13BO14836 293 aaPredicted RBP10.3□□□□□ -0.76
USP3-203ENST00000538686 DHHO43323 396 aa10.3□□□□□ -0.76
USP3-203ENST00000538686 RPL32P62910 135 aaKnown RBP10.3□□□□□ -0.76
USP3-203ENST00000538686 ANKRD37Q7Z713 158 aa10.3□□□□□ -0.76
USP3-203ENST00000538686 CRIPAKQ8N1N5 446 aa10.3□□□□□ -0.76
USP3-203ENST00000538686 C19orf24Q9BVV8 132 aa10.3□□□□□ -0.76
USP3-203ENST00000538686 SH2D2AQ9NP31 389 aa10.3□□□□□ -0.76
USP3-203ENST00000538686 SELENOKQ9Y6D0 94 aa10.3□□□□□ -0.76
USP3-203ENST00000538686 MUC22E2RYF6 1773 aaPredicted RBP10.3□□□□□ -0.76
USP3-203ENST00000538686 PRSS38A1L453 326 aa10.3□□□□□ -0.76
USP3-203ENST00000538686 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.3□□□□□ -0.76
USP3-203ENST00000538686 NRG2O14511 850 aaPredicted RBP10.3□□□□□ -0.76
USP3-203ENST00000538686 NKX2-8O15522 239 aa10.3□□□□□ -0.76
USP3-203ENST00000538686 LINC00596Q86U02 117 aa10.3□□□□□ -0.76
USP3-203ENST00000538686 OR10X1Q8NGY0 326 aa10.3□□□□□ -0.76
USP3-203ENST00000538686 IL36RNQ9UBH0 155 aa10.3□□□□□ -0.76
USP3-203ENST00000538686 C2CD4DB7Z1M9 353 aa10.29□□□□□ -0.76
USP3-203ENST00000538686 IGKV3-11P04433 115 aa10.29□□□□□ -0.76
USP3-203ENST00000538686 THBDP07204 575 aa10.29□□□□□ -0.76
USP3-203ENST00000538686 P0C879 139 aa10.29□□□□□ -0.76
USP3-203ENST00000538686 CYBAP13498 195 aa10.29□□□□□ -0.76
USP3-203ENST00000538686 FCGR2BP31994 310 aaPredicted RBP10.29□□□□□ -0.76
USP3-203ENST00000538686 GUSBP1Q15486 140 aa10.29□□□□□ -0.76
USP3-203ENST00000538686 SPATA46Q5T0L3 261 aa10.29□□□□□ -0.76
USP3-203ENST00000538686 ZNF562Q6V9R5 426 aa10.29□□□□□ -0.76
USP3-203ENST00000538686 Q6ZS92 163 aa10.29□□□□□ -0.76
USP3-203ENST00000538686 LINC00173Q6ZV60 143 aa10.29□□□□□ -0.76
USP3-203ENST00000538686 NUP35Q8NFH5 326 aa10.29□□□□□ -0.76
USP3-203ENST00000538686 BADQ92934 168 aa10.29□□□□□ -0.76
USP3-203ENST00000538686 OXGR1Q96P68 337 aa10.29□□□□□ -0.76
USP3-203ENST00000538686 OR1A1Q9P1Q5 309 aa10.29□□□□□ -0.76
USP3-203ENST00000538686 LINC00312Q9Y6C7 94 aa10.29□□□□□ -0.76
USP3-203ENST00000538686 CACNA1IQ9P0X4 2223 aa10.29□□□□□ -0.76
USP3-203ENST00000538686 CENPFP49454 3210 aa10.29□□□□□ -0.76
USP3-203ENST00000538686 CLDN14O95500 239 aa10.29□□□□□ -0.76
USP3-203ENST00000538686 FGF12P61328 243 aa10.29□□□□□ -0.76
USP3-203ENST00000538686 RPS21P63220 83 aaKnown RBP10.29□□□□□ -0.76
USP3-203ENST00000538686 WFDC2Q14508 124 aa10.29□□□□□ -0.76
USP3-203ENST00000538686 DAZAP2Q15038 168 aaPredicted RBP10.29□□□□□ -0.76
USP3-203ENST00000538686 C10orf128Q5T292 105 aa10.29□□□□□ -0.76
USP3-203ENST00000538686 GDF5OSQ5U4N7 250 aa10.29□□□□□ -0.76
USP3-203ENST00000538686 CARD17Q5XLA6 110 aa10.29□□□□□ -0.76
USP3-203ENST00000538686 DTX1Q86Y01 620 aa10.29□□□□□ -0.76
USP3-203ENST00000538686 ZBTB34Q8NCN2 500 aa10.29□□□□□ -0.76
USP3-203ENST00000538686 IGF2BP2-AS1Q96M15 143 aa10.29□□□□□ -0.76
USP3-203ENST00000538686 HINT2Q9BX68 163 aa10.29□□□□□ -0.76
USP3-203ENST00000538686 TNRC6AQ8NDV7 1962 aaKnown RBP10.28□□□□□ -0.76
USP3-203ENST00000538686 A0A1B0GXF2 115 aa10.28□□□□□ -0.76
USP3-203ENST00000538686 ZG16O60844 167 aa10.28□□□□□ -0.76
USP3-203ENST00000538686 HBBP68871 147 aa10.28□□□□□ -0.76
USP3-203ENST00000538686 RSPO1Q2MKA7 263 aaPredicted RBP10.28□□□□□ -0.76
USP3-203ENST00000538686 NRN1LQ496H8 165 aa10.28□□□□□ -0.76
USP3-203ENST00000538686 ZNF611Q8N823 705 aa10.28□□□□□ -0.76
USP3-203ENST00000538686 ABHD17AQ96GS6 310 aa10.28□□□□□ -0.76
USP3-203ENST00000538686 PRDM6Q9NQX0 595 aa10.28□□□□□ -0.76
USP3-203ENST00000538686 IDI2-AS1Q9NZ38 188 aa10.28□□□□□ -0.76
USP3-203ENST00000538686 DUSP13Q9UII6 198 aa10.28□□□□□ -0.76
USP3-203ENST00000538686 SH2D7A6NKC9 451 aaPredicted RBP10.27□□□□□ -0.76
USP3-203ENST00000538686 ZIC3O60481 467 aa10.27□□□□□ -0.76
USP3-203ENST00000538686 CNIH1O95406 144 aa10.27□□□□□ -0.76
USP3-203ENST00000538686 IGLV2-14P01704 120 aa10.27□□□□□ -0.76
USP3-203ENST00000538686 IGLV2-8P01709 118 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms