RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 S100A12P80511 92 aa20.33■□□□□ 0.85
RAB40C-204ENST00000538492 FOXC1Q12948 553 aa20.33■□□□□ 0.85
RAB40C-204ENST00000538492 SPATA31B1PQ5VZV4 182 aa20.33■□□□□ 0.85
RAB40C-204ENST00000538492 IGFBP2P18065 325 aa20.33■□□□□ 0.84
RAB40C-204ENST00000538492 REG1BP48304 166 aa20.33■□□□□ 0.84
RAB40C-204ENST00000538492 TMEM249Q2WGJ8 235 aa20.33■□□□□ 0.84
RAB40C-204ENST00000538492 MOB3BQ86TA1 216 aa20.33■□□□□ 0.84
RAB40C-204ENST00000538492 MRPL20Q9BYC9 149 aaKnown RBP20.33■□□□□ 0.84
RAB40C-204ENST00000538492 PPIAL4EA0A075B759 164 aa20.32■□□□□ 0.84
RAB40C-204ENST00000538492 PPIAL4DF5H284 164 aa20.32■□□□□ 0.84
RAB40C-204ENST00000538492 PHOX2AO14813 284 aa20.32■□□□□ 0.84
RAB40C-204ENST00000538492 PPIAL4FP0DN26 164 aa20.32■□□□□ 0.84
RAB40C-204ENST00000538492 S100PP25815 95 aa20.32■□□□□ 0.84
RAB40C-204ENST00000538492 EFNB3Q15768 340 aa20.32■□□□□ 0.84
RAB40C-204ENST00000538492 TMEM200BQ69YZ2 307 aa20.32■□□□□ 0.84
RAB40C-204ENST00000538492 ZNF714Q96N38 554 aa20.32■□□□□ 0.84
RAB40C-204ENST00000538492 GPR61Q9BZJ8 451 aa20.32■□□□□ 0.84
RAB40C-204ENST00000538492 KCNIP2Q9NS61 270 aa20.32■□□□□ 0.84
RAB40C-204ENST00000538492 GAR1Q9NY12 217 aaKnown RBP20.32■□□□□ 0.84
RAB40C-204ENST00000538492 JKAMPQ9P055 326 aa20.32■□□□□ 0.84
RAB40C-204ENST00000538492 PPIAL4AQ9Y536 164 aa20.32■□□□□ 0.84
RAB40C-204ENST00000538492 PGPEP1LA6NFU8 196 aa20.32■□□□□ 0.84
RAB40C-204ENST00000538492 CXorf1O96002 111 aa20.32■□□□□ 0.84
RAB40C-204ENST00000538492 SAA1P0DJI8 122 aaPredicted RBP20.32■□□□□ 0.84
RAB40C-204ENST00000538492 LYPD2Q6UXB3 125 aa20.32■□□□□ 0.84
RAB40C-204ENST00000538492 SPACA3Q8IXA5 215 aa20.32■□□□□ 0.84
RAB40C-204ENST00000538492 WFIKKN1Q96NZ8 548 aa20.32■□□□□ 0.84
RAB40C-204ENST00000538492 GSN-AS1Q9NRJ2 163 aa20.32■□□□□ 0.84
RAB40C-204ENST00000538492 A0A1W2PPQ1 181 aa20.31■□□□□ 0.84
RAB40C-204ENST00000538492 TMEM178BH3BS89 294 aa20.31■□□□□ 0.84
RAB40C-204ENST00000538492 PPP1R2P9O14990 202 aa20.31■□□□□ 0.84
RAB40C-204ENST00000538492 CHRNA7P36544 502 aa20.31■□□□□ 0.84
RAB40C-204ENST00000538492 PRCDQ00LT1 54 aa20.31■□□□□ 0.84
RAB40C-204ENST00000538492 TMEM30BQ3MIR4 351 aa20.31■□□□□ 0.84
RAB40C-204ENST00000538492 POLEQ07864 2286 aa20.31■□□□□ 0.84
RAB40C-204ENST00000538492 TEX50A0A1B0GTY4 177 aa20.31■□□□□ 0.84
RAB40C-204ENST00000538492 VENTXO95231 258 aa20.31■□□□□ 0.84
RAB40C-204ENST00000538492 FABP1P07148 127 aa20.31■□□□□ 0.84
RAB40C-204ENST00000538492 S100A2P29034 98 aa20.31■□□□□ 0.84
RAB40C-204ENST00000538492 NEUROG1Q92886 237 aa20.31■□□□□ 0.84
RAB40C-204ENST00000538492 PCGF1Q9BSM1 259 aa20.31■□□□□ 0.84
RAB40C-204ENST00000538492 LRFN3Q9BTN0 628 aa20.31■□□□□ 0.84
RAB40C-204ENST00000538492 TGOLN2O43493 480 aa20.3■□□□□ 0.84
RAB40C-204ENST00000538492 NDUFS6O75380 124 aaKnown RBP20.3■□□□□ 0.84
RAB40C-204ENST00000538492 ZNF833PQ6ZTB9 187 aa20.3■□□□□ 0.84
RAB40C-204ENST00000538492 ASCL5Q7RTU5 278 aa20.3■□□□□ 0.84
RAB40C-204ENST00000538492 LINC01551Q86U37 167 aa20.3■□□□□ 0.84
RAB40C-204ENST00000538492 ANAPC16Q96DE5 110 aa20.3■□□□□ 0.84
RAB40C-204ENST00000538492 MEF2CQ06413 473 aaPredicted RBP20.3■□□□□ 0.84
RAB40C-204ENST00000538492 RAB31Q13636 194 aa20.3■□□□□ 0.84
RAB40C-204ENST00000538492 OR4X1Q8NH49 305 aa20.3■□□□□ 0.84
RAB40C-204ENST00000538492 MIOXQ9UGB7 285 aa20.3■□□□□ 0.84
RAB40C-204ENST00000538492 ZNF257Q9Y2Q1 563 aa20.3■□□□□ 0.84
RAB40C-204ENST00000538492 FOXH1O75593 365 aa20.29■□□□□ 0.84
RAB40C-204ENST00000538492 TBR1Q16650 682 aa20.29■□□□□ 0.84
RAB40C-204ENST00000538492 OR10W1Q8NGF6 305 aa20.29■□□□□ 0.84
RAB40C-204ENST00000538492 PYGO2Q9BRQ0 406 aa20.29■□□□□ 0.84
RAB40C-204ENST00000538492 SRD5A3Q9H8P0 318 aa20.29■□□□□ 0.84
RAB40C-204ENST00000538492 TMEM106BQ9NUM4 274 aa20.29■□□□□ 0.84
RAB40C-204ENST00000538492 TLN1Q9Y490 2541 aaKnown RBP20.29■□□□□ 0.84
RAB40C-204ENST00000538492 HIST3H2BBQ8N257 126 aa20.29■□□□□ 0.84
RAB40C-204ENST00000538492 ZNF114Q8NC26 417 aa20.29■□□□□ 0.84
RAB40C-204ENST00000538492 YTHDF2Q9Y5A9 579 aaKnown RBP20.29■□□□□ 0.84
RAB40C-204ENST00000538492 ACTL6BO94805 426 aa20.28■□□□□ 0.84
RAB40C-204ENST00000538492 DIAPH2-AS1Q14236 149 aa20.28■□□□□ 0.84
RAB40C-204ENST00000538492 HARBI1Q96MB7 349 aa20.28■□□□□ 0.84
RAB40C-204ENST00000538492 ZNF835Q9Y2P0 537 aa20.28■□□□□ 0.84
RAB40C-204ENST00000538492 RPL29P47914 159 aaKnown RBP20.28■□□□□ 0.84
RAB40C-204ENST00000538492 RHOBP62745 196 aa20.28■□□□□ 0.84
RAB40C-204ENST00000538492 SCO2A0A1W2PP80 73 aa20.27■□□□□ 0.84
RAB40C-204ENST00000538492 PPP5D1E7EU14 171 aa20.27■□□□□ 0.84
RAB40C-204ENST00000538492 GCHFRP30047 84 aa20.27■□□□□ 0.84
RAB40C-204ENST00000538492 CHRNB4P30926 498 aa20.27■□□□□ 0.84
RAB40C-204ENST00000538492 MLANAQ16655 118 aa20.27■□□□□ 0.84
RAB40C-204ENST00000538492 OR10D4PQ8NGN7 298 aa20.27■□□□□ 0.84
RAB40C-204ENST00000538492 RNASE6Q93091 150 aaKnown RBP20.27■□□□□ 0.84
RAB40C-204ENST00000538492 RELNP78509 3460 aa20.27■□□□□ 0.84
RAB40C-204ENST00000538492 F6UZH7 168 aa20.27■□□□□ 0.83
RAB40C-204ENST00000538492 APOA2P02652 100 aa20.27■□□□□ 0.83
RAB40C-204ENST00000538492 C1QTNF9P0C862 333 aa20.27■□□□□ 0.83
RAB40C-204ENST00000538492 PYY3Q5JQD4 70 aa20.27■□□□□ 0.83
RAB40C-204ENST00000538492 OR4P4Q8NGL7 312 aa20.27■□□□□ 0.83
RAB40C-204ENST00000538492 BET1LQ9NYM9 111 aa20.27■□□□□ 0.83
RAB40C-204ENST00000538492 TRBV20OR9-2A0A075B6H5 130 aa20.26■□□□□ 0.83
RAB40C-204ENST00000538492 NDUFB3O43676 98 aa20.26■□□□□ 0.83
RAB40C-204ENST00000538492 OR10X1Q8NGY0 326 aa20.26■□□□□ 0.83
RAB40C-204ENST00000538492 DYNLRB1Q9NP97 96 aa20.26■□□□□ 0.83
RAB40C-204ENST00000538492 CTSZQ9UBR2 303 aa20.26■□□□□ 0.83
RAB40C-204ENST00000538492 IGKV1OR2-108A0A075B7D4 117 aa20.26■□□□□ 0.83
RAB40C-204ENST00000538492 LINC00587B1AMM8 73 aa20.26■□□□□ 0.83
RAB40C-204ENST00000538492 H0YJW9 148 aa20.26■□□□□ 0.83
RAB40C-204ENST00000538492 GATA2P23769 480 aaPredicted RBP20.26■□□□□ 0.83
RAB40C-204ENST00000538492 FAM3BP58499 235 aaPredicted RBP20.26■□□□□ 0.83
RAB40C-204ENST00000538492 PRR20EP86478 221 aa20.26■□□□□ 0.83
RAB40C-204ENST00000538492 PRR20CP86479 221 aa20.26■□□□□ 0.83
RAB40C-204ENST00000538492 PRR20DP86480 221 aa20.26■□□□□ 0.83
RAB40C-204ENST00000538492 PRR20BP86481 221 aa20.26■□□□□ 0.83
RAB40C-204ENST00000538492 PRR20AP86496 221 aa20.26■□□□□ 0.83
RAB40C-204ENST00000538492 HNF1AP20823 631 aa20.25■□□□□ 0.83
RAB40C-204ENST00000538492 FAM78BQ5VT40 261 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms