RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 APOA2P02652 100 aa11.4□□□□□ -0.59
LIMK1-208ENST00000538333 STAG3L2P0CL84 134 aa11.4□□□□□ -0.59
LIMK1-208ENST00000538333 STAG3L3P0CL85 134 aa11.4□□□□□ -0.59
LIMK1-208ENST00000538333 ZNF674Q2M3X9 581 aa11.4□□□□□ -0.59
LIMK1-208ENST00000538333 BSXQ3C1V8 233 aa11.4□□□□□ -0.59
LIMK1-208ENST00000538333 TMEM155Q4W5P6 130 aa11.4□□□□□ -0.59
LIMK1-208ENST00000538333 TMEM177Q53S58 311 aa11.4□□□□□ -0.59
LIMK1-208ENST00000538333 OR5B3Q8NH48 314 aa11.4□□□□□ -0.59
LIMK1-208ENST00000538333 LINC01560Q8TB33 94 aa11.4□□□□□ -0.59
LIMK1-208ENST00000538333 NEIL1Q96FI4 390 aaPredicted RBP11.4□□□□□ -0.59
LIMK1-208ENST00000538333 SSX3Q99909 188 aa11.4□□□□□ -0.59
LIMK1-208ENST00000538333 HINT2Q9BX68 163 aa11.4□□□□□ -0.59
LIMK1-208ENST00000538333 RAXQ9Y2V3 346 aa11.4□□□□□ -0.59
LIMK1-208ENST00000538333 A0A087X0M5 115 aa11.39□□□□□ -0.59
LIMK1-208ENST00000538333 A0A1B0GX30 115 aa11.39□□□□□ -0.59
LIMK1-208ENST00000538333 ZNF98A6NK75 572 aa11.39□□□□□ -0.59
LIMK1-208ENST00000538333 C11orf94C9JXX5 98 aa11.39□□□□□ -0.59
LIMK1-208ENST00000538333 SIAH2O43255 324 aa11.39□□□□□ -0.59
LIMK1-208ENST00000538333 NPPCP23582 126 aa11.39□□□□□ -0.59
LIMK1-208ENST00000538333 UCNP55089 124 aa11.39□□□□□ -0.59
LIMK1-208ENST00000538333 B2MP61769 119 aa11.39□□□□□ -0.59
LIMK1-208ENST00000538333 RPL23P62829 140 aaKnown RBP11.39□□□□□ -0.59
LIMK1-208ENST00000538333 DIAPH2-AS1Q14236 149 aa11.39□□□□□ -0.59
LIMK1-208ENST00000538333 SSMEM1Q8WWF3 244 aa11.39□□□□□ -0.59
LIMK1-208ENST00000538333 HARBI1Q96MB7 349 aa11.39□□□□□ -0.59
LIMK1-208ENST00000538333 CTDSP1Q9GZU7 261 aa11.39□□□□□ -0.59
LIMK1-208ENST00000538333 KCNIP2Q9NS61 270 aa11.39□□□□□ -0.59
LIMK1-208ENST00000538333 FKBP11Q9NYL4 201 aa11.39□□□□□ -0.59
LIMK1-208ENST00000538333 OPN1MWP04001 364 aa11.38□□□□□ -0.59
LIMK1-208ENST00000538333 OPN1MW2P0DN77 364 aa11.38□□□□□ -0.59
LIMK1-208ENST00000538333 OPN1MW3P0DN78 364 aa11.38□□□□□ -0.59
LIMK1-208ENST00000538333 GRNP28799 593 aaKnown RBP11.38□□□□□ -0.59
LIMK1-208ENST00000538333 REG1BP48304 166 aa11.38□□□□□ -0.59
LIMK1-208ENST00000538333 ZNF137PP52743 207 aa11.38□□□□□ -0.59
LIMK1-208ENST00000538333 ADIRFQ15847 76 aa11.38□□□□□ -0.59
LIMK1-208ENST00000538333 C11orf42Q8N5U0 333 aa11.38□□□□□ -0.59
LIMK1-208ENST00000538333 TMEM186Q96B77 213 aa11.38□□□□□ -0.59
LIMK1-208ENST00000538333 NABP2Q9BQ15 211 aa11.38□□□□□ -0.59
LIMK1-208ENST00000538333 ZZEF1O43149 2961 aa11.38□□□□□ -0.59
LIMK1-208ENST00000538333 ARL14EPLP0DKL9 152 aa11.38□□□□□ -0.59
LIMK1-208ENST00000538333 RPL29P47914 159 aaKnown RBP11.38□□□□□ -0.59
LIMK1-208ENST00000538333 CASP6P55212 293 aa11.38□□□□□ -0.59
LIMK1-208ENST00000538333 PRR20EP86478 221 aa11.38□□□□□ -0.59
LIMK1-208ENST00000538333 PRR20CP86479 221 aa11.38□□□□□ -0.59
LIMK1-208ENST00000538333 PRR20DP86480 221 aa11.38□□□□□ -0.59
LIMK1-208ENST00000538333 PRR20BP86481 221 aa11.38□□□□□ -0.59
LIMK1-208ENST00000538333 PRR20AP86496 221 aa11.38□□□□□ -0.59
LIMK1-208ENST00000538333 FABP9Q0Z7S8 132 aa11.38□□□□□ -0.59
LIMK1-208ENST00000538333 C2orf83Q53S99 150 aa11.38□□□□□ -0.59
LIMK1-208ENST00000538333 SPNS3Q6ZMD2 512 aa11.38□□□□□ -0.59
LIMK1-208ENST00000538333 STPG3Q8N7X2 389 aa11.38□□□□□ -0.59
LIMK1-208ENST00000538333 OR10X1Q8NGY0 326 aa11.38□□□□□ -0.59
LIMK1-208ENST00000538333 ABHD5Q8WTS1 349 aa11.38□□□□□ -0.59
LIMK1-208ENST00000538333 FAM90A27PA6NNH2 459 aa11.37□□□□□ -0.59
LIMK1-208ENST00000538333 AP4M1O00189 453 aa11.37□□□□□ -0.59
LIMK1-208ENST00000538333 IGFBP2P18065 325 aa11.37□□□□□ -0.59
LIMK1-208ENST00000538333 ATP5IP56385 69 aaPredicted RBP11.37□□□□□ -0.59
LIMK1-208ENST00000538333 FLYWCH2Q96CP2 140 aaKnown RBP11.37□□□□□ -0.59
LIMK1-208ENST00000538333 NDUFA4L2Q9NRX3 87 aa11.37□□□□□ -0.59
LIMK1-208ENST00000538333 TRBV24-1A0A075B6N3 115 aa11.37□□□□□ -0.59
LIMK1-208ENST00000538333 IGHV1-8P0DP01 117 aa11.37□□□□□ -0.59
LIMK1-208ENST00000538333 RNASE2P10153 161 aaKnown RBP11.37□□□□□ -0.59
LIMK1-208ENST00000538333 CHRNB4P30926 498 aa11.37□□□□□ -0.59
LIMK1-208ENST00000538333 ATP5G3P48201 142 aa11.37□□□□□ -0.59
LIMK1-208ENST00000538333 PDPNQ86YL7 162 aa11.37□□□□□ -0.59
LIMK1-208ENST00000538333 ST6GALNAC3Q8NDV1 305 aa11.37□□□□□ -0.59
LIMK1-208ENST00000538333 OR51G1Q8NGK1 321 aa11.37□□□□□ -0.59
LIMK1-208ENST00000538333 OR4C13Q8NGP0 309 aa11.37□□□□□ -0.59
LIMK1-208ENST00000538333 OR1L8Q8NGR8 309 aa11.37□□□□□ -0.59
LIMK1-208ENST00000538333 C12orf57Q99622 126 aa11.37□□□□□ -0.59
LIMK1-208ENST00000538333 IGKV1OR2-108A0A075B7D4 117 aa11.36□□□□□ -0.59
LIMK1-208ENST00000538333 INS-IGF2F8WCM5 200 aa11.36□□□□□ -0.59
LIMK1-208ENST00000538333 PDE6DO43924 150 aa11.36□□□□□ -0.59
LIMK1-208ENST00000538333 CXorf1O96002 111 aa11.36□□□□□ -0.59
LIMK1-208ENST00000538333 LINC00869P0C866 280 aa11.36□□□□□ -0.59
LIMK1-208ENST00000538333 UBE2G2P60604 165 aa11.36□□□□□ -0.59
LIMK1-208ENST00000538333 GNB1P62873 340 aa11.36□□□□□ -0.59
LIMK1-208ENST00000538333 RPL8P62917 257 aaKnown RBP11.36□□□□□ -0.59
LIMK1-208ENST00000538333 RAB31Q13636 194 aa11.36□□□□□ -0.59
LIMK1-208ENST00000538333 TMEM144Q7Z5S9 345 aa11.36□□□□□ -0.59
LIMK1-208ENST00000538333 MOB3BQ86TA1 216 aa11.36□□□□□ -0.59
LIMK1-208ENST00000538333 OR10W1Q8NGF6 305 aa11.36□□□□□ -0.59
LIMK1-208ENST00000538333 OR9G1Q8NH87 305 aa11.36□□□□□ -0.59
LIMK1-208ENST00000538333 FAM210BQ96KR6 192 aa11.36□□□□□ -0.59
LIMK1-208ENST00000538333 SEPSECSQ9HD40 501 aaKnown RBP11.36□□□□□ -0.59
LIMK1-208ENST00000538333 RELNP78509 3460 aa11.36□□□□□ -0.59
LIMK1-208ENST00000538333 E7EUB6 86 aa11.35□□□□□ -0.59
LIMK1-208ENST00000538333 VENTXO95231 258 aa11.35□□□□□ -0.59
LIMK1-208ENST00000538333 IGLV2-23P01705 113 aa11.35□□□□□ -0.59
LIMK1-208ENST00000538333 USF1P22415 310 aaPredicted RBP11.35□□□□□ -0.59
LIMK1-208ENST00000538333 MEOX2P50222 304 aa11.35□□□□□ -0.59
LIMK1-208ENST00000538333 KLRB1Q12918 225 aa11.35□□□□□ -0.59
LIMK1-208ENST00000538333 C16orf82Q7Z2V1 217 aa11.35□□□□□ -0.59
LIMK1-208ENST00000538333 TMEM167AQ8TBQ9 72 aa11.35□□□□□ -0.59
LIMK1-208ENST00000538333 PCGF1Q9BSM1 259 aa11.35□□□□□ -0.59
LIMK1-208ENST00000538333 SLC45A2Q9UMX9 530 aa11.35□□□□□ -0.59
LIMK1-208ENST00000538333 TRBV23-1A0A0A0MS06 115 aa11.35□□□□□ -0.59
LIMK1-208ENST00000538333 CCL21O00585 134 aa11.35□□□□□ -0.59
LIMK1-208ENST00000538333 PFN1P07737 140 aaKnown RBP11.35□□□□□ -0.59
LIMK1-208ENST00000538333 KIAA0141Q14154 515 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms