RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 LINC01560Q8TB33 94 aa9.29□□□□□ -0.92
SLC28A1-204ENST00000538177 TMEM186Q96B77 213 aa9.29□□□□□ -0.92
SLC28A1-204ENST00000538177 NABP2Q9BQ15 211 aa9.29□□□□□ -0.92
SLC28A1-204ENST00000538177 PATZ1Q9HBE1 687 aaKnown RBP9.29□□□□□ -0.92
SLC28A1-204ENST00000538177 RPS10P46783 165 aaKnown RBP9.29□□□□□ -0.92
SLC28A1-204ENST00000538177 RPL29P47914 159 aaKnown RBP9.29□□□□□ -0.92
SLC28A1-204ENST00000538177 KLRB1Q12918 225 aa9.29□□□□□ -0.92
SLC28A1-204ENST00000538177 C2orf83Q53S99 150 aa9.29□□□□□ -0.92
SLC28A1-204ENST00000538177 ST6GALNAC3Q8NDV1 305 aa9.29□□□□□ -0.92
SLC28A1-204ENST00000538177 OR10X1Q8NGY0 326 aa9.29□□□□□ -0.92
SLC28A1-204ENST00000538177 RPUSD4Q96CM3 377 aaKnown RBP9.29□□□□□ -0.92
SLC28A1-204ENST00000538177 HARBI1Q96MB7 349 aa9.29□□□□□ -0.92
SLC28A1-204ENST00000538177 PARLQ9H300 379 aa9.29□□□□□ -0.92
SLC28A1-204ENST00000538177 METTL1Q9UBP6 276 aaKnown RBP9.29□□□□□ -0.92
SLC28A1-204ENST00000538177 URGCP-MRPS24S4R325 110 aa9.29□□□□□ -0.92
SLC28A1-204ENST00000538177 SPTA1P02549 2419 aa9.28□□□□□ -0.92
SLC28A1-204ENST00000538177 TGIF2-C20orf24A0A0A6YYL0 155 aa9.28□□□□□ -0.92
SLC28A1-204ENST00000538177 C11orf94C9JXX5 98 aa9.28□□□□□ -0.92
SLC28A1-204ENST00000538177 FSTL3O95633 263 aa9.28□□□□□ -0.92
SLC28A1-204ENST00000538177 STAG3L2P0CL84 134 aa9.28□□□□□ -0.92
SLC28A1-204ENST00000538177 STAG3L3P0CL85 134 aa9.28□□□□□ -0.92
SLC28A1-204ENST00000538177 B2MP61769 119 aa9.28□□□□□ -0.92
SLC28A1-204ENST00000538177 RAB31Q13636 194 aa9.28□□□□□ -0.92
SLC28A1-204ENST00000538177 ZNF674Q2M3X9 581 aa9.28□□□□□ -0.92
SLC28A1-204ENST00000538177 FLYWCH2Q96CP2 140 aaKnown RBP9.28□□□□□ -0.92
SLC28A1-204ENST00000538177 TRBV23-1A0A0A0MS06 115 aa9.27□□□□□ -0.92
SLC28A1-204ENST00000538177 FAM90A27PA6NNH2 459 aa9.27□□□□□ -0.92
SLC28A1-204ENST00000538177 INS-IGF2F8WCM5 200 aa9.27□□□□□ -0.92
SLC28A1-204ENST00000538177 CCL21O00585 134 aa9.27□□□□□ -0.92
SLC28A1-204ENST00000538177 SIAH2O43255 324 aa9.27□□□□□ -0.92
SLC28A1-204ENST00000538177 OPN1MWP04001 364 aa9.27□□□□□ -0.92
SLC28A1-204ENST00000538177 OPN1MW2P0DN77 364 aa9.27□□□□□ -0.92
SLC28A1-204ENST00000538177 OPN1MW3P0DN78 364 aa9.27□□□□□ -0.92
SLC28A1-204ENST00000538177 NPPCP23582 126 aa9.27□□□□□ -0.92
SLC28A1-204ENST00000538177 RPL23P62829 140 aaKnown RBP9.27□□□□□ -0.92
SLC28A1-204ENST00000538177 PRR20EP86478 221 aa9.27□□□□□ -0.92
SLC28A1-204ENST00000538177 PRR20CP86479 221 aa9.27□□□□□ -0.92
SLC28A1-204ENST00000538177 PRR20DP86480 221 aa9.27□□□□□ -0.92
SLC28A1-204ENST00000538177 PRR20BP86481 221 aa9.27□□□□□ -0.92
SLC28A1-204ENST00000538177 PRR20AP86496 221 aa9.27□□□□□ -0.92
SLC28A1-204ENST00000538177 PDPNQ86YL7 162 aa9.27□□□□□ -0.92
SLC28A1-204ENST00000538177 C11orf42Q8N5U0 333 aa9.27□□□□□ -0.92
SLC28A1-204ENST00000538177 OR4C13Q8NGP0 309 aa9.27□□□□□ -0.92
SLC28A1-204ENST00000538177 OR1L8Q8NGR8 309 aa9.27□□□□□ -0.92
SLC28A1-204ENST00000538177 OR4A5Q8NH83 315 aa9.27□□□□□ -0.92
SLC28A1-204ENST00000538177 OR9G1Q8NH87 305 aa9.27□□□□□ -0.92
SLC28A1-204ENST00000538177 ABHD5Q8WTS1 349 aa9.27□□□□□ -0.92
SLC28A1-204ENST00000538177 SSMEM1Q8WWF3 244 aa9.27□□□□□ -0.92
SLC28A1-204ENST00000538177 PCGF1Q9BSM1 259 aa9.27□□□□□ -0.92
SLC28A1-204ENST00000538177 NDUFA4L2Q9NRX3 87 aa9.27□□□□□ -0.92
SLC28A1-204ENST00000538177 PDE6DO43924 150 aa9.27□□□□□ -0.93
SLC28A1-204ENST00000538177 CXorf1O96002 111 aa9.27□□□□□ -0.93
SLC28A1-204ENST00000538177 IGHV1-8P0DP01 117 aa9.27□□□□□ -0.93
SLC28A1-204ENST00000538177 RNASE2P10153 161 aaKnown RBP9.27□□□□□ -0.93
SLC28A1-204ENST00000538177 USF1P22415 310 aaPredicted RBP9.27□□□□□ -0.93
SLC28A1-204ENST00000538177 REG1BP48304 166 aa9.27□□□□□ -0.93
SLC28A1-204ENST00000538177 RPL8P62917 257 aaKnown RBP9.27□□□□□ -0.93
SLC28A1-204ENST00000538177 DIAPH2-AS1Q14236 149 aa9.27□□□□□ -0.93
SLC28A1-204ENST00000538177 ADIRFQ15847 76 aa9.27□□□□□ -0.93
SLC28A1-204ENST00000538177 SPNS3Q6ZMD2 512 aa9.27□□□□□ -0.93
SLC28A1-204ENST00000538177 TMEM144Q7Z5S9 345 aa9.27□□□□□ -0.93
SLC28A1-204ENST00000538177 STPG3Q8N7X2 389 aa9.27□□□□□ -0.93
SLC28A1-204ENST00000538177 TMEM167AQ8TBQ9 72 aa9.27□□□□□ -0.93
SLC28A1-204ENST00000538177 TXNDC17Q9BRA2 123 aa9.27□□□□□ -0.93
SLC28A1-204ENST00000538177 TRBV24-1A0A075B6N3 115 aa9.26□□□□□ -0.93
SLC28A1-204ENST00000538177 ZNF98A6NK75 572 aa9.26□□□□□ -0.93
SLC28A1-204ENST00000538177 AP4M1O00189 453 aa9.26□□□□□ -0.93
SLC28A1-204ENST00000538177 VENTXO95231 258 aa9.26□□□□□ -0.93
SLC28A1-204ENST00000538177 LINC00869P0C866 280 aa9.26□□□□□ -0.93
SLC28A1-204ENST00000538177 ARL14EPLP0DKL9 152 aa9.26□□□□□ -0.93
SLC28A1-204ENST00000538177 IGFBP2P18065 325 aa9.26□□□□□ -0.93
SLC28A1-204ENST00000538177 GRNP28799 593 aaKnown RBP9.26□□□□□ -0.93
SLC28A1-204ENST00000538177 MUC15Q8N387 334 aa9.26□□□□□ -0.93
SLC28A1-204ENST00000538177 VSTM2AQ8TAG5 236 aa9.26□□□□□ -0.93
SLC28A1-204ENST00000538177 SSX3Q99909 188 aa9.26□□□□□ -0.93
SLC28A1-204ENST00000538177 COMMD5Q9GZQ3 224 aa9.26□□□□□ -0.93
SLC28A1-204ENST00000538177 SLC45A2Q9UMX9 530 aa9.26□□□□□ -0.93
SLC28A1-204ENST00000538177 ADGRG4Q8IZF6 3080 aa9.26□□□□□ -0.93
SLC28A1-204ENST00000538177 IGLV2-23P01705 113 aa9.26□□□□□ -0.93
SLC28A1-204ENST00000538177 RHOBP62745 196 aa9.26□□□□□ -0.93
SLC28A1-204ENST00000538177 FABP9Q0Z7S8 132 aa9.26□□□□□ -0.93
SLC28A1-204ENST00000538177 ZNF672Q499Z4 452 aaPredicted RBP9.26□□□□□ -0.93
SLC28A1-204ENST00000538177 FAM210BQ96KR6 192 aa9.26□□□□□ -0.93
SLC28A1-204ENST00000538177 RALYQ9UKM9 306 aaKnown RBP9.26□□□□□ -0.93
SLC28A1-204ENST00000538177 WASHC3Q9Y3C0 194 aa9.26□□□□□ -0.93
SLC28A1-204ENST00000538177 F6UZH7 168 aa9.25□□□□□ -0.93
SLC28A1-204ENST00000538177 TGOLN2O43493 480 aa9.25□□□□□ -0.93
SLC28A1-204ENST00000538177 COL8A2P25067 703 aa9.25□□□□□ -0.93
SLC28A1-204ENST00000538177 MC5RP33032 325 aa9.25□□□□□ -0.93
SLC28A1-204ENST00000538177 ATP5G3P48201 142 aa9.25□□□□□ -0.93
SLC28A1-204ENST00000538177 GNB1P62873 340 aa9.25□□□□□ -0.93
SLC28A1-204ENST00000538177 CST9LP1Q5W188 147 aa9.25□□□□□ -0.93
SLC28A1-204ENST00000538177 TGIF2LXQ8IUE1 241 aa9.25□□□□□ -0.93
SLC28A1-204ENST00000538177 OR10W1Q8NGF6 305 aa9.25□□□□□ -0.93
SLC28A1-204ENST00000538177 NANPQ8TBE9 248 aa9.25□□□□□ -0.93
SLC28A1-204ENST00000538177 TMEM133Q9H2Q1 129 aa9.25□□□□□ -0.93
SLC28A1-204ENST00000538177 PFN1P07737 140 aaKnown RBP9.24□□□□□ -0.93
SLC28A1-204ENST00000538177 MEOX2P50222 304 aa9.24□□□□□ -0.93
SLC28A1-204ENST00000538177 UBE2G2P60604 165 aa9.24□□□□□ -0.93
SLC28A1-204ENST00000538177 ERHP84090 104 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms