RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 C2orf83Q53S99 150 aa12.73□□□□□ -0.37
MKS1-204ENST00000537529 TGIF2LXQ8IUE1 241 aa12.73□□□□□ -0.37
MKS1-204ENST00000537529 RPUSD4Q96CM3 377 aaKnown RBP12.73□□□□□ -0.37
MKS1-204ENST00000537529 TMEM133Q9H2Q1 129 aa12.73□□□□□ -0.37
MKS1-204ENST00000537529 TMEM242Q9NWH2 141 aa12.73□□□□□ -0.37
MKS1-204ENST00000537529 CEP295Q9C0D2 2601 aa12.73□□□□□ -0.37
MKS1-204ENST00000537529 TMEM241Q24JQ0 296 aa12.73□□□□□ -0.37
MKS1-204ENST00000537529 ZNF674Q2M3X9 581 aa12.73□□□□□ -0.37
MKS1-204ENST00000537529 OR1L8Q8NGR8 309 aa12.73□□□□□ -0.37
MKS1-204ENST00000537529 TMEM167AQ8TBQ9 72 aa12.73□□□□□ -0.37
MKS1-204ENST00000537529 SSMEM1Q8WWF3 244 aa12.73□□□□□ -0.37
MKS1-204ENST00000537529 C1orf159Q96HA4 380 aa12.73□□□□□ -0.37
MKS1-204ENST00000537529 TET2Q6N021 2002 aaPredicted RBP12.72□□□□□ -0.37
MKS1-204ENST00000537529 PIEZO2Q9H5I5 2752 aa12.72□□□□□ -0.37
MKS1-204ENST00000537529 IGHV2-70P01814 119 aa12.72□□□□□ -0.37
MKS1-204ENST00000537529 RPL29P47914 159 aaKnown RBP12.72□□□□□ -0.37
MKS1-204ENST00000537529 ELOBQ15370 118 aa12.72□□□□□ -0.37
MKS1-204ENST00000537529 BSXQ3C1V8 233 aa12.72□□□□□ -0.37
MKS1-204ENST00000537529 C1QL4Q86Z23 238 aa12.72□□□□□ -0.37
MKS1-204ENST00000537529 STPG3Q8N7X2 389 aa12.72□□□□□ -0.37
MKS1-204ENST00000537529 TNFRSF14Q92956 283 aa12.72□□□□□ -0.37
MKS1-204ENST00000537529 TMEM204Q9BSN7 226 aa12.72□□□□□ -0.37
MKS1-204ENST00000537529 CTDSP1Q9GZU7 261 aa12.72□□□□□ -0.37
MKS1-204ENST00000537529 MAP1BP46821 2468 aaKnown RBP12.72□□□□□ -0.37
MKS1-204ENST00000537529 C11orf94C9JXX5 98 aa12.71□□□□□ -0.37
MKS1-204ENST00000537529 LYNX1G3V0Z9 82 aa12.71□□□□□ -0.37
MKS1-204ENST00000537529 CXorf1O96002 111 aa12.71□□□□□ -0.37
MKS1-204ENST00000537529 S100A6P06703 90 aa12.71□□□□□ -0.37
MKS1-204ENST00000537529 LYNX1P0DP58 116 aa12.71□□□□□ -0.37
MKS1-204ENST00000537529 COL8A2P25067 703 aa12.71□□□□□ -0.37
MKS1-204ENST00000537529 MC5RP33032 325 aa12.71□□□□□ -0.37
MKS1-204ENST00000537529 Q8WTZ3 238 aa12.71□□□□□ -0.37
MKS1-204ENST00000537529 PARLQ9H300 379 aa12.71□□□□□ -0.37
MKS1-204ENST00000537529 NDUFA4L2Q9NRX3 87 aa12.71□□□□□ -0.37
MKS1-204ENST00000537529 YLPM1P49750 1951 aaKnown RBP12.71□□□□□ -0.37
MKS1-204ENST00000537529 A0A1W2PN81 502 aa12.71□□□□□ -0.38
MKS1-204ENST00000537529 INS-IGF2F8WCM5 200 aa12.71□□□□□ -0.38
MKS1-204ENST00000537529 CLDN34H7C241 214 aa12.71□□□□□ -0.38
MKS1-204ENST00000537529 PDE6DO43924 150 aa12.71□□□□□ -0.38
MKS1-204ENST00000537529 STAG3L2P0CL84 134 aa12.71□□□□□ -0.38
MKS1-204ENST00000537529 STAG3L3P0CL85 134 aa12.71□□□□□ -0.38
MKS1-204ENST00000537529 RNASE2P10153 161 aaKnown RBP12.71□□□□□ -0.38
MKS1-204ENST00000537529 CHRNA7P36544 502 aa12.71□□□□□ -0.38
MKS1-204ENST00000537529 AKR1D1P51857 326 aa12.71□□□□□ -0.38
MKS1-204ENST00000537529 RHOBP62745 196 aa12.71□□□□□ -0.38
MKS1-204ENST00000537529 DIAPH2-AS1Q14236 149 aa12.71□□□□□ -0.38
MKS1-204ENST00000537529 ADIRFQ15847 76 aa12.71□□□□□ -0.38
MKS1-204ENST00000537529 VMA21Q3ZAQ7 101 aa12.71□□□□□ -0.38
MKS1-204ENST00000537529 ZNF343Q6P1L6 599 aa12.71□□□□□ -0.38
MKS1-204ENST00000537529 ARL14EPLP0DKL9 152 aa12.7□□□□□ -0.38
MKS1-204ENST00000537529 ERHP84090 104 aaKnown RBP12.7□□□□□ -0.38
MKS1-204ENST00000537529 TMEM144Q7Z5S9 345 aa12.7□□□□□ -0.38
MKS1-204ENST00000537529 C11orf42Q8N5U0 333 aa12.7□□□□□ -0.38
MKS1-204ENST00000537529 URGCP-MRPS24S4R325 110 aa12.7□□□□□ -0.38
MKS1-204ENST00000537529 IGFBP2P18065 325 aa12.69□□□□□ -0.38
MKS1-204ENST00000537529 RPS10P46783 165 aaKnown RBP12.69□□□□□ -0.38
MKS1-204ENST00000537529 RND2P52198 227 aa12.69□□□□□ -0.38
MKS1-204ENST00000537529 PRRX1P54821 245 aa12.69□□□□□ -0.38
MKS1-204ENST00000537529 CDSNQ15517 529 aa12.69□□□□□ -0.38
MKS1-204ENST00000537529 SPNS3Q6ZMD2 512 aa12.69□□□□□ -0.38
MKS1-204ENST00000537529 NANPQ8TBE9 248 aa12.69□□□□□ -0.38
MKS1-204ENST00000537529 TXNDC17Q9BRA2 123 aa12.69□□□□□ -0.38
MKS1-204ENST00000537529 ATMQ13315 3056 aa12.69□□□□□ -0.38
MKS1-204ENST00000537529 LAMA5O15230 3695 aa12.69□□□□□ -0.38
MKS1-204ENST00000537529 F6UZH7 168 aa12.69□□□□□ -0.38
MKS1-204ENST00000537529 DLL1O00548 723 aa12.69□□□□□ -0.38
MKS1-204ENST00000537529 IGLV2-23P01705 113 aa12.69□□□□□ -0.38
MKS1-204ENST00000537529 RBP4P02753 201 aa12.69□□□□□ -0.38
MKS1-204ENST00000537529 RPL35P42766 123 aaKnown RBP12.69□□□□□ -0.38
MKS1-204ENST00000537529 PRR20EP86478 221 aa12.69□□□□□ -0.38
MKS1-204ENST00000537529 PRR20CP86479 221 aa12.69□□□□□ -0.38
MKS1-204ENST00000537529 PRR20DP86480 221 aa12.69□□□□□ -0.38
MKS1-204ENST00000537529 PRR20BP86481 221 aa12.69□□□□□ -0.38
MKS1-204ENST00000537529 PRR20AP86496 221 aa12.69□□□□□ -0.38
MKS1-204ENST00000537529 CST9LP1Q5W188 147 aa12.69□□□□□ -0.38
MKS1-204ENST00000537529 ZNF841Q6ZN19 808 aa12.69□□□□□ -0.38
MKS1-204ENST00000537529 OR10W1Q8NGF6 305 aa12.69□□□□□ -0.38
MKS1-204ENST00000537529 ABHD5Q8WTS1 349 aa12.69□□□□□ -0.38
MKS1-204ENST00000537529 RAB1BQ9H0U4 201 aa12.69□□□□□ -0.38
MKS1-204ENST00000537529 DMXL2Q8TDJ6 3036 aa12.69□□□□□ -0.38
MKS1-204ENST00000537529 TGIF2-C20orf24A0A0A6YYL0 155 aa12.68□□□□□ -0.38
MKS1-204ENST00000537529 IGHV2-26A0A0B4J1V2 119 aa12.68□□□□□ -0.38
MKS1-204ENST00000537529 CXCL1P09341 107 aa12.68□□□□□ -0.38
MKS1-204ENST00000537529 UBE2G2P60604 165 aa12.68□□□□□ -0.38
MKS1-204ENST00000537529 SNRPEP62304 92 aaKnown RBP12.68□□□□□ -0.38
MKS1-204ENST00000537529 RPL23P62829 140 aaKnown RBP12.68□□□□□ -0.38
MKS1-204ENST00000537529 LINC00518Q8N0U6 118 aa12.68□□□□□ -0.38
MKS1-204ENST00000537529 OR8B3Q8NGG8 313 aa12.68□□□□□ -0.38
MKS1-204ENST00000537529 SLC35E1Q96K37 410 aa12.68□□□□□ -0.38
MKS1-204ENST00000537529 OR8B2Q96RD0 313 aa12.68□□□□□ -0.38
MKS1-204ENST00000537529 SLC45A2Q9UMX9 530 aa12.68□□□□□ -0.38
MKS1-204ENST00000537529 BSNQ9UPA5 3926 aa12.68□□□□□ -0.38
MKS1-204ENST00000537529 PCNX1Q96RV3 2341 aa12.68□□□□□ -0.38
MKS1-204ENST00000537529 C5orf52A6NGY3 159 aa12.68□□□□□ -0.38
MKS1-204ENST00000537529 MT-CO2P00403 227 aa12.68□□□□□ -0.38
MKS1-204ENST00000537529 LGALS7P47929 136 aa12.68□□□□□ -0.38
MKS1-204ENST00000537529 CLEC7AQ9BXN2 247 aa12.68□□□□□ -0.38
MKS1-204ENST00000537529 MIOXQ9UGB7 285 aa12.68□□□□□ -0.38
MKS1-204ENST00000537529 TLN1Q9Y490 2541 aaKnown RBP12.67□□□□□ -0.38
MKS1-204ENST00000537529 VENTXO95231 258 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms