RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 BAIAP2Q9UQB8 552 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 FOXA2Q9Y261 457 aaPredicted RBP3.67□□□□□ -1.82
CLIP1-207ENST00000536634 KLK5Q9Y337 293 aaPredicted RBP3.67□□□□□ -1.82
CLIP1-207ENST00000536634 IGHV3OR16-12A0A075B7B8 117 aa3.66□□□□□ -1.82
CLIP1-207ENST00000536634 IGHV3-43A0A0B4J1X8 118 aa3.66□□□□□ -1.82
CLIP1-207ENST00000536634 CCDC182A6NF36 153 aa3.66□□□□□ -1.82
CLIP1-207ENST00000536634 OR11H12B2RN74 326 aa3.66□□□□□ -1.82
CLIP1-207ENST00000536634 ZNF701M0R085 212 aaPredicted RBP3.66□□□□□ -1.82
CLIP1-207ENST00000536634 RTL8CO15255 209 aa3.66□□□□□ -1.82
CLIP1-207ENST00000536634 SSX5O60225 188 aa3.66□□□□□ -1.82
CLIP1-207ENST00000536634 EDF1O60869 148 aaKnown RBP3.66□□□□□ -1.82
CLIP1-207ENST00000536634 TRBV12-3P01733 135 aa3.66□□□□□ -1.82
CLIP1-207ENST00000536634 IGHV3-43DP0DP04 118 aa3.66□□□□□ -1.82
CLIP1-207ENST00000536634 ZBTB25P24278 435 aa3.66□□□□□ -1.82
CLIP1-207ENST00000536634 TPPP2P59282 170 aa3.66□□□□□ -1.82
CLIP1-207ENST00000536634 TSPAN5P62079 268 aa3.66□□□□□ -1.82
CLIP1-207ENST00000536634 DEFA5Q01523 94 aa3.66□□□□□ -1.82
CLIP1-207ENST00000536634 TNFRSF9Q07011 255 aa3.66□□□□□ -1.82
CLIP1-207ENST00000536634 PDZK1IP1Q13113 114 aa3.66□□□□□ -1.82
CLIP1-207ENST00000536634 KLF5Q13887 457 aaPredicted RBP3.66□□□□□ -1.82
CLIP1-207ENST00000536634 LCN12Q6JVE5 192 aa3.66□□□□□ -1.82
CLIP1-207ENST00000536634 LINC00336Q6ZUF6 198 aa3.66□□□□□ -1.82
CLIP1-207ENST00000536634 LYG2Q86SG7 212 aa3.66□□□□□ -1.82
CLIP1-207ENST00000536634 CROCCP2Q86T23 111 aa3.66□□□□□ -1.82
CLIP1-207ENST00000536634 Q8N402 240 aa3.66□□□□□ -1.82
CLIP1-207ENST00000536634 LINC00311Q8N616 119 aa3.66□□□□□ -1.82
CLIP1-207ENST00000536634 OR5D18Q8NGL1 313 aa3.66□□□□□ -1.82
CLIP1-207ENST00000536634 PLPPR1Q8TBJ4 325 aa3.66□□□□□ -1.82
CLIP1-207ENST00000536634 MARC2Q969Z3 335 aa3.66□□□□□ -1.82
CLIP1-207ENST00000536634 MRPL53Q96EL3 112 aaKnown RBP3.66□□□□□ -1.82
CLIP1-207ENST00000536634 PYURFQ96I23 114 aa3.66□□□□□ -1.82
CLIP1-207ENST00000536634 APOL4Q9BPW4 351 aa3.66□□□□□ -1.82
CLIP1-207ENST00000536634 NIPSNAP1Q9BPW8 284 aa3.66□□□□□ -1.82
CLIP1-207ENST00000536634 FAM103A1Q9BTL3 118 aaKnown RBP3.66□□□□□ -1.82
CLIP1-207ENST00000536634 PAXXQ9BUH6 204 aa3.66□□□□□ -1.82
CLIP1-207ENST00000536634 MROQ9BYG7 248 aa3.66□□□□□ -1.82
CLIP1-207ENST00000536634 PLEKHA1Q9HB21 404 aa3.66□□□□□ -1.82
CLIP1-207ENST00000536634 MRM2Q9UI43 246 aaKnown RBP3.66□□□□□ -1.82
CLIP1-207ENST00000536634 IKZF2Q9UKS7 526 aa3.66□□□□□ -1.82
CLIP1-207ENST00000536634 R4GMQ9 66 aa3.66□□□□□ -1.82
CLIP1-207ENST00000536634 ZNF320A2RRD8 509 aa3.65□□□□□ -1.83
CLIP1-207ENST00000536634 EFCAB10A6NFE3 127 aa3.65□□□□□ -1.83
CLIP1-207ENST00000536634 PCP4L1A6NKN8 68 aa3.65□□□□□ -1.83
CLIP1-207ENST00000536634 H0YJX3 145 aa3.65□□□□□ -1.83
CLIP1-207ENST00000536634 C15orf65H3BRN8 121 aa3.65□□□□□ -1.83
CLIP1-207ENST00000536634 L7N2F9 121 aa3.65□□□□□ -1.83
CLIP1-207ENST00000536634 TNFRSF11BO00300 401 aa3.65□□□□□ -1.83
CLIP1-207ENST00000536634 FCN1O00602 326 aa3.65□□□□□ -1.83
CLIP1-207ENST00000536634 DEGS1O15121 323 aa3.65□□□□□ -1.83
CLIP1-207ENST00000536634 GATBO75879 557 aaKnown RBP3.65□□□□□ -1.83
CLIP1-207ENST00000536634 RBBP9O75884 186 aa3.65□□□□□ -1.83
CLIP1-207ENST00000536634 CCNB2O95067 398 aa3.65□□□□□ -1.83
CLIP1-207ENST00000536634 FABP3P05413 133 aa3.65□□□□□ -1.83
CLIP1-207ENST00000536634 GLAP06280 429 aa3.65□□□□□ -1.83
CLIP1-207ENST00000536634 MAGEA2P43356 314 aa3.65□□□□□ -1.83
CLIP1-207ENST00000536634 RBP2P50120 134 aa3.65□□□□□ -1.83
CLIP1-207ENST00000536634 ZNF137PP52743 207 aa3.65□□□□□ -1.83
CLIP1-207ENST00000536634 NKX2-5P52952 324 aaPredicted RBP3.65□□□□□ -1.83
CLIP1-207ENST00000536634 ACTBP60709 375 aa3.65□□□□□ -1.83
CLIP1-207ENST00000536634 APOFQ13790 326 aa3.65□□□□□ -1.83
CLIP1-207ENST00000536634 COTL1Q14019 142 aa3.65□□□□□ -1.83
CLIP1-207ENST00000536634 OXA1LQ15070 435 aa3.65□□□□□ -1.83
CLIP1-207ENST00000536634 C5orf64Q2M2E5 130 aa3.65□□□□□ -1.83
CLIP1-207ENST00000536634 ZNF674Q2M3X9 581 aa3.65□□□□□ -1.83
CLIP1-207ENST00000536634 PAN3Q58A45 887 aaKnown RBP3.65□□□□□ -1.83
CLIP1-207ENST00000536634 STEAP1BQ6NZ63 245 aa3.65□□□□□ -1.83
CLIP1-207ENST00000536634 CD164L2Q6UWJ8 174 aa3.65□□□□□ -1.83
CLIP1-207ENST00000536634 SLC25A48Q6ZT89 311 aaKnown RBP3.65□□□□□ -1.83
CLIP1-207ENST00000536634 UTS2BQ765I0 119 aa3.65□□□□□ -1.83
CLIP1-207ENST00000536634 KCTD9Q7L273 389 aa3.65□□□□□ -1.83
CLIP1-207ENST00000536634 CHST4Q8NCG5 386 aa3.65□□□□□ -1.83
CLIP1-207ENST00000536634 ZNF439Q8NDP4 499 aa3.65□□□□□ -1.83
CLIP1-207ENST00000536634 GRPEL2Q8TAA5 225 aa3.65□□□□□ -1.83
CLIP1-207ENST00000536634 VN1R17PQ8TDU5 208 aa3.65□□□□□ -1.83
CLIP1-207ENST00000536634 ADAT3Q96EY9 351 aaPredicted RBP3.65□□□□□ -1.83
CLIP1-207ENST00000536634 TMEM80Q96HE8 168 aa3.65□□□□□ -1.83
CLIP1-207ENST00000536634 MRPS26Q9BYN8 205 aaKnown RBP3.65□□□□□ -1.83
CLIP1-207ENST00000536634 CNOT2Q9NZN8 540 aaKnown RBP3.65□□□□□ -1.83
CLIP1-207ENST00000536634 RBMX2Q9Y388 322 aaKnown RBP3.65□□□□□ -1.83
CLIP1-207ENST00000536634 GMPPBQ9Y5P6 360 aa3.65□□□□□ -1.83
CLIP1-207ENST00000536634 FLG2Q5D862 2391 aaPredicted RBP3.65□□□□□ -1.83
CLIP1-207ENST00000536634 IGHV3-35A0A0C4DH35 117 aa3.64□□□□□ -1.83
CLIP1-207ENST00000536634 LOC107986453A0A1B0GWG9 222 aa3.64□□□□□ -1.83
CLIP1-207ENST00000536634 CCDC160A6NGH7 325 aa3.64□□□□□ -1.83
CLIP1-207ENST00000536634 H3BN98 237 aa3.64□□□□□ -1.83
CLIP1-207ENST00000536634 SDCBPO00560 298 aaPredicted RBP3.64□□□□□ -1.83
CLIP1-207ENST00000536634 NBR2O15453 112 aa3.64□□□□□ -1.83
CLIP1-207ENST00000536634 RPP14O95059 124 aaKnown RBP3.64□□□□□ -1.83
CLIP1-207ENST00000536634 NDUFA3O95167 84 aa3.64□□□□□ -1.83
CLIP1-207ENST00000536634 CYB5AP00167 134 aa3.64□□□□□ -1.83
CLIP1-207ENST00000536634 TRGV3P03979 118 aa3.64□□□□□ -1.83
CLIP1-207ENST00000536634 S100A9P06702 114 aaKnown RBP3.64□□□□□ -1.83
CLIP1-207ENST00000536634 PGAM2P15259 253 aa3.64□□□□□ -1.83
CLIP1-207ENST00000536634 ZP3P21754 424 aa3.64□□□□□ -1.83
CLIP1-207ENST00000536634 UCP1P25874 307 aa3.64□□□□□ -1.83
CLIP1-207ENST00000536634 ATP1B3P54709 279 aa3.64□□□□□ -1.83
CLIP1-207ENST00000536634 CXCR4P61073 352 aa3.64□□□□□ -1.83
CLIP1-207ENST00000536634 PSME3P61289 254 aa3.64□□□□□ -1.83
CLIP1-207ENST00000536634 ZNF45Q02386 682 aa3.64□□□□□ -1.83
CLIP1-207ENST00000536634 GINS1Q14691 196 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms