RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 OR51B2Q9Y5P1 312 aa10.06□□□□□ -0.8
PRKDC-206ENST00000536429 FABP12A6NFH5 140 aa10.05□□□□□ -0.8
PRKDC-206ENST00000536429 MFSD2BA6NFX1 497 aa10.05□□□□□ -0.8
PRKDC-206ENST00000536429 FGF2P09038 288 aa10.05□□□□□ -0.8
PRKDC-206ENST00000536429 TRAPPC2P0DI81 140 aa10.05□□□□□ -0.8
PRKDC-206ENST00000536429 TRAPPC2BP0DI82 140 aa10.05□□□□□ -0.8
PRKDC-206ENST00000536429 SPNP16150 400 aa10.05□□□□□ -0.8
PRKDC-206ENST00000536429 PTBP1P26599 531 aaKnown RBP eCLIP10.05□□□□□ -0.8
PRKDC-206ENST00000536429 INSL3P51460 131 aa10.05□□□□□ -0.8
PRKDC-206ENST00000536429 CADM3Q8N126 398 aa10.05□□□□□ -0.8
PRKDC-206ENST00000536429 OR1L8Q8NGR8 309 aa10.05□□□□□ -0.8
PRKDC-206ENST00000536429 ZNF486Q96H40 463 aaPredicted RBP10.05□□□□□ -0.8
PRKDC-206ENST00000536429 CCDC140Q96MF4 163 aa10.05□□□□□ -0.8
PRKDC-206ENST00000536429 RTBDNQ9BSG5 229 aaPredicted RBP10.05□□□□□ -0.8
PRKDC-206ENST00000536429 HINT2Q9BX68 163 aa10.05□□□□□ -0.8
PRKDC-206ENST00000536429 NDUFA4L2Q9NRX3 87 aa10.05□□□□□ -0.8
PRKDC-206ENST00000536429 FAM212BQ9NTI7 297 aaPredicted RBP10.05□□□□□ -0.8
PRKDC-206ENST00000536429 ZNF256Q9Y2P7 627 aaPredicted RBP10.05□□□□□ -0.8
PRKDC-206ENST00000536429 V9GYH0 126 aa10.05□□□□□ -0.8
PRKDC-206ENST00000536429 ANKRD20A5PA0PJZ0 165 aa10.04□□□□□ -0.8
PRKDC-206ENST00000536429 C15orf61A6NNL5 157 aa10.04□□□□□ -0.8
PRKDC-206ENST00000536429 H0Y980 276 aa10.04□□□□□ -0.8
PRKDC-206ENST00000536429 LY86O95711 162 aa10.04□□□□□ -0.8
PRKDC-206ENST00000536429 IGKV1-5P01602 117 aa10.04□□□□□ -0.8
PRKDC-206ENST00000536429 CTSDP07339 412 aaPredicted RBP10.04□□□□□ -0.8
PRKDC-206ENST00000536429 AKAIN1P0CW23 69 aa10.04□□□□□ -0.8
PRKDC-206ENST00000536429 OR13C7P0DN81 318 aa10.04□□□□□ -0.8
PRKDC-206ENST00000536429 DEFA4P12838 97 aa10.04□□□□□ -0.8
PRKDC-206ENST00000536429 EDN2P20800 178 aa10.04□□□□□ -0.8
PRKDC-206ENST00000536429 MFAP2P55001 183 aa10.04□□□□□ -0.8
PRKDC-206ENST00000536429 MEF2DQ14814 521 aa10.04□□□□□ -0.8
PRKDC-206ENST00000536429 RPEL1Q2QD12 228 aa10.04□□□□□ -0.8
PRKDC-206ENST00000536429 OR51S1Q8NGJ8 323 aa10.04□□□□□ -0.8
PRKDC-206ENST00000536429 OR9G4Q8NGQ1 327 aa10.04□□□□□ -0.8
PRKDC-206ENST00000536429 SRSF8Q9BRL6 282 aaKnown RBP10.04□□□□□ -0.8
PRKDC-206ENST00000536429 C5orf66Q9H5L9 145 aa10.04□□□□□ -0.8
PRKDC-206ENST00000536429 TMEM14BQ9NUH8 114 aa10.04□□□□□ -0.8
PRKDC-206ENST00000536429 LSM4Q9Y4Z0 139 aaKnown RBP10.04□□□□□ -0.8
PRKDC-206ENST00000536429 COL7A1Q02388 2944 aa10.03□□□□□ -0.8
PRKDC-206ENST00000536429 A0A0G2JRQ6 117 aa10.03□□□□□ -0.8
PRKDC-206ENST00000536429 C3orf85A0A1B0GTC6 90 aa10.03□□□□□ -0.8
PRKDC-206ENST00000536429 DISC1C4P0D8 188 aa10.03□□□□□ -0.8
PRKDC-206ENST00000536429 SNAPC5O75971 98 aa10.03□□□□□ -0.8
PRKDC-206ENST00000536429 SERPINE2P07093 398 aa10.03□□□□□ -0.8
PRKDC-206ENST00000536429 CSN3P07498 182 aa10.03□□□□□ -0.8
PRKDC-206ENST00000536429 P0C879 139 aa10.03□□□□□ -0.8
PRKDC-206ENST00000536429 ZNF79Q15937 498 aa10.03□□□□□ -0.8
PRKDC-206ENST00000536429 CLEC19AQ6UXS0 136 aa10.03□□□□□ -0.8
PRKDC-206ENST00000536429 GDPD1Q8N9F7 314 aa10.03□□□□□ -0.8
PRKDC-206ENST00000536429 ZFAND1Q8TCF1 268 aa10.03□□□□□ -0.8
PRKDC-206ENST00000536429 TRIM63Q969Q1 353 aa10.03□□□□□ -0.8
PRKDC-206ENST00000536429 OR4C12Q96R67 309 aa10.03□□□□□ -0.8
PRKDC-206ENST00000536429 ZC4H2Q9NQZ6 224 aa10.03□□□□□ -0.8
PRKDC-206ENST00000536429 COPZ2Q9P299 210 aa10.03□□□□□ -0.8
PRKDC-206ENST00000536429 RABL2AQ9UBK7 228 aaPredicted RBP10.03□□□□□ -0.8
PRKDC-206ENST00000536429 ZMAT5Q9UDW3 170 aaKnown RBP10.03□□□□□ -0.8
PRKDC-206ENST00000536429 PRNDQ9UKY0 176 aa10.03□□□□□ -0.8
PRKDC-206ENST00000536429 RABL2BQ9UNT1 228 aa10.03□□□□□ -0.8
PRKDC-206ENST00000536429 SORL1Q92673 2214 aa10.02□□□□□ -0.81
PRKDC-206ENST00000536429 IGHV3-21A0A0B4J1V1 117 aa10.02□□□□□ -0.81
PRKDC-206ENST00000536429 ZNF701M0R085 212 aaPredicted RBP10.02□□□□□ -0.81
PRKDC-206ENST00000536429 OR2C1O95371 312 aa10.02□□□□□ -0.81
PRKDC-206ENST00000536429 DHFRP00374 187 aa10.02□□□□□ -0.81
PRKDC-206ENST00000536429 IGLV1-51P01701 117 aa10.02□□□□□ -0.81
PRKDC-206ENST00000536429 HIST1H1BP16401 226 aaKnown RBP10.02□□□□□ -0.81
PRKDC-206ENST00000536429 SPINK9Q5DT21 86 aa10.02□□□□□ -0.81
PRKDC-206ENST00000536429 ADAMTSL5Q6ZMM2 481 aa10.02□□□□□ -0.81
PRKDC-206ENST00000536429 H2BFWTQ7Z2G1 175 aa10.02□□□□□ -0.81
PRKDC-206ENST00000536429 CCDC190Q86UF4 302 aa10.02□□□□□ -0.81
PRKDC-206ENST00000536429 LHFPL5Q8TAF8 219 aa10.02□□□□□ -0.81
PRKDC-206ENST00000536429 LSM10Q969L4 123 aaKnown RBP10.02□□□□□ -0.81
PRKDC-206ENST00000536429 THAP7Q9BT49 309 aaPredicted RBP10.02□□□□□ -0.81
PRKDC-206ENST00000536429 ELOVL1Q9BW60 279 aa10.02□□□□□ -0.81
PRKDC-206ENST00000536429 GPR132Q9UNW8 380 aa10.02□□□□□ -0.81
PRKDC-206ENST00000536429 A0A0B4J293 547 aa10.01□□□□□ -0.81
PRKDC-206ENST00000536429 OR5AC1P0C628 307 aa10.01□□□□□ -0.81
PRKDC-206ENST00000536429 GP9P14770 177 aa10.01□□□□□ -0.81
PRKDC-206ENST00000536429 UCP1P25874 307 aa10.01□□□□□ -0.81
PRKDC-206ENST00000536429 KLF9Q13886 244 aaPredicted RBP10.01□□□□□ -0.81
PRKDC-206ENST00000536429 TRIM16LQ309B1 348 aa10.01□□□□□ -0.81
PRKDC-206ENST00000536429 PYDC2Q56P42 97 aa10.01□□□□□ -0.81
PRKDC-206ENST00000536429 THOC7Q6I9Y2 204 aaKnown RBP10.01□□□□□ -0.81
PRKDC-206ENST00000536429 CCDC71LQ8N9Z2 235 aa10.01□□□□□ -0.81
PRKDC-206ENST00000536429 OR6Q1Q8NGQ2 317 aa10.01□□□□□ -0.81
PRKDC-206ENST00000536429 OR5B3Q8NH48 314 aa10.01□□□□□ -0.81
PRKDC-206ENST00000536429 OR4A16Q8NH70 328 aa10.01□□□□□ -0.81
PRKDC-206ENST00000536429 ZNF502Q8TBZ5 544 aa10.01□□□□□ -0.81
PRKDC-206ENST00000536429 EEF1AKMT3Q96AZ1 226 aa10.01□□□□□ -0.81
PRKDC-206ENST00000536429 TSC22D3Q99576 134 aa10.01□□□□□ -0.81
PRKDC-206ENST00000536429 MCUBQ9NWR8 336 aa10.01□□□□□ -0.81
PRKDC-206ENST00000536429 SLC2A8Q9NY64 477 aa10.01□□□□□ -0.81
PRKDC-206ENST00000536429 F11RQ9Y624 299 aaKnown RBP10.01□□□□□ -0.81
PRKDC-206ENST00000536429 IZUMO1RA6ND01 250 aa10□□□□□ -0.81
PRKDC-206ENST00000536429 GGCTO75223 188 aaKnown RBP10□□□□□ -0.81
PRKDC-206ENST00000536429 CLEC3BP05452 202 aa10□□□□□ -0.81
PRKDC-206ENST00000536429 GPR183P32249 361 aa10□□□□□ -0.81
PRKDC-206ENST00000536429 ARL3P36405 182 aa10□□□□□ -0.81
PRKDC-206ENST00000536429 MECP2P51608 486 aaKnown RBP10□□□□□ -0.81
PRKDC-206ENST00000536429 SURF2Q15527 256 aaPredicted RBP10□□□□□ -0.81
PRKDC-206ENST00000536429 C11orf87Q6NUJ2 197 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms