RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 CXCL10P02778 98 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 C3orf79P0CE67 100 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 IGHV4-38-2P0DP08 117 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 BCL2P10415 239 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 FABP2P12104 132 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 SLC25A6P12236 298 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 IGLL1P15814 213 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 HIST1H1CP16403 213 aaKnown RBP2.01□□□□□ -2.09
SKA3-207ENST00000536239 ZNF708P17019 499 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 MDKP21741 143 aaPredicted RBP2.01□□□□□ -2.09
SKA3-207ENST00000536239 AQP1P29972 269 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 GRPRP30550 384 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 GPR183P32249 361 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 HRH1P35367 487 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 CA7P43166 264 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 GPR1P46091 355 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 RGRP47804 291 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 FABP6P51161 128 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 LIM2P55344 173 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 RPL27P61353 136 aaKnown RBP2.01□□□□□ -2.09
SKA3-207ENST00000536239 RPS11P62280 158 aaKnown RBP eCLIP2.01□□□□□ -2.09
SKA3-207ENST00000536239 ZNF85Q03923 595 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 FMODQ06828 376 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 MFGE8Q08431 387 aaPredicted RBP2.01□□□□□ -2.09
SKA3-207ENST00000536239 PSG7Q13046 419 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 EDDM3AQ14507 147 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 CD226Q15762 336 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 IGFBP7Q16270 282 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 FAM106AQ4KMX7 169 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 PRR30Q53SZ7 412 aaPredicted RBP2.01□□□□□ -2.09
SKA3-207ENST00000536239 CLEC12AQ5QGZ9 265 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 MUC21Q5SSG8 566 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 UTF1Q5T230 341 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 ZNF684Q5T5D7 378 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 TXNDC8Q6A555 127 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 NOXRED1Q6NXP6 359 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 STAC2Q6ZMT1 411 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 SHISA6Q6ZSJ9 500 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 RFLNAQ6ZTI6 216 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 PPP1R27Q86WC6 154 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 HOGA1Q86XE5 327 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 UMODL1-AS1Q8N2C9 162 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 GCSAMQ8N6F7 178 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 ZNF433Q8N7K0 673 aaPredicted RBP2.01□□□□□ -2.09
SKA3-207ENST00000536239 OR2AJ1Q8NGZ0 328 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 OR10D3Q8NH80 312 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 SGMS2Q8NHU3 365 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 FNDC9Q8TBE3 224 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 ZNF502Q8TBZ5 544 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 RPS4Y2Q8TD47 263 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 TMEM54Q969K7 222 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 MAL2Q969L2 176 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 TM4SF19Q96DZ7 209 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 PERPQ96FX8 193 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 OR4C12Q96R67 309 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 SDF2Q99470 211 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 CDX2Q99626 313 aaPredicted RBP2.01□□□□□ -2.09
SKA3-207ENST00000536239 GFI1Q99684 422 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 ATP5SQ99766 215 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 SPAG8Q99932 426 aaPredicted RBP2.01□□□□□ -2.09
SKA3-207ENST00000536239 C16orf70Q9BSU1 422 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 C19orf24Q9BVV8 132 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 RBM24Q9BX46 236 aaKnown RBP2.01□□□□□ -2.09
SKA3-207ENST00000536239 PECRQ9BY49 303 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 MRPL32Q9BYC8 188 aaKnown RBP2.01□□□□□ -2.09
SKA3-207ENST00000536239 PARP12Q9H0J9 701 aaKnown RBP2.01□□□□□ -2.09
SKA3-207ENST00000536239 OR2D2Q9H210 308 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 WDR76Q9H967 626 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 SH2D2AQ9NP31 389 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 ENY2Q9NPA8 101 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 PRSS16Q9NQE7 514 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 SPANXB1Q9NS25 103 aaPredicted RBP2.01□□□□□ -2.09
SKA3-207ENST00000536239 RPRMQ9NS64 109 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 C1orf123Q9NWV4 160 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 LHX3Q9UBR4 397 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 RARRES3Q9UL19 164 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 PIGLQ9Y2B2 252 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 POLR1DQ9Y2S0 133 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 POLDIP2Q9Y2S7 368 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 SOX21Q9Y651 276 aaPredicted RBP2.01□□□□□ -2.09
SKA3-207ENST00000536239 SPCS1Q9Y6A9 102 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 VWA8A3KMH1 1905 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 DENND4CQ5VZ89 1909 aa2.01□□□□□ -2.09
SKA3-207ENST00000536239 SCN2AQ99250 2005 aa2□□□□□ -2.09
SKA3-207ENST00000536239 COL16A1Q07092 1604 aaPredicted RBP2□□□□□ -2.09
SKA3-207ENST00000536239 TRGV10A0A0A0MS01 117 aa2□□□□□ -2.09
SKA3-207ENST00000536239 TRBV5-5A0A0J9YX44 114 aa2□□□□□ -2.09
SKA3-207ENST00000536239 LOC102725191A0A1B0GVB3 256 aa2□□□□□ -2.09
SKA3-207ENST00000536239 PRSS37A4D1T9 235 aa2□□□□□ -2.09
SKA3-207ENST00000536239 LIPT2A6NK58 231 aa2□□□□□ -2.09
SKA3-207ENST00000536239 ZNF850A8MQ14 1090 aa2□□□□□ -2.09
SKA3-207ENST00000536239 LOC730098B7Z3J9 87 aa2□□□□□ -2.09
SKA3-207ENST00000536239 F5H5K5 113 aa2□□□□□ -2.09
SKA3-207ENST00000536239 H3BUT2 72 aa2□□□□□ -2.09
SKA3-207ENST00000536239 J3KT08 172 aa2□□□□□ -2.09
SKA3-207ENST00000536239 IFNL4K9M1U5 179 aa2□□□□□ -2.09
SKA3-207ENST00000536239 ISLRO14498 428 aa2□□□□□ -2.09
SKA3-207ENST00000536239 SH2D1BO14796 132 aa2□□□□□ -2.09
SKA3-207ENST00000536239 PIN1P1O15428 100 aa2□□□□□ -2.09
SKA3-207ENST00000536239 RS1O15537 224 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms