RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 SDK2Q58EX2 2172 aa4.72□□□□□ -1.65
VPS33A-203ENST00000536212 C5orf42Q9H799 3197 aa4.72□□□□□ -1.65
VPS33A-203ENST00000536212 C9orf118A6NHY6 69 aa4.71□□□□□ -1.66
VPS33A-203ENST00000536212 ZNF785A8K8V0 405 aa4.71□□□□□ -1.66
VPS33A-203ENST00000536212 RRHO14718 337 aa4.71□□□□□ -1.66
VPS33A-203ENST00000536212 MGST3O14880 152 aa4.71□□□□□ -1.66
VPS33A-203ENST00000536212 TIMM8AO60220 97 aaPredicted RBP4.71□□□□□ -1.66
VPS33A-203ENST00000536212 CXorf1O96002 111 aa4.71□□□□□ -1.66
VPS33A-203ENST00000536212 CECR9P0C854 216 aa4.71□□□□□ -1.66
VPS33A-203ENST00000536212 SP9P0CG40 484 aa4.71□□□□□ -1.66
VPS33A-203ENST00000536212 IL3RAP26951 378 aa4.71□□□□□ -1.66
VPS33A-203ENST00000536212 SSTR5P35346 364 aa4.71□□□□□ -1.66
VPS33A-203ENST00000536212 GPR12P47775 334 aa4.71□□□□□ -1.66
VPS33A-203ENST00000536212 ATP5G3P48201 142 aa4.71□□□□□ -1.66
VPS33A-203ENST00000536212 TNFSF10P50591 281 aa4.71□□□□□ -1.66
VPS33A-203ENST00000536212 CNN1P51911 297 aaKnown RBP4.71□□□□□ -1.66
VPS33A-203ENST00000536212 LOXL3P58215 753 aa4.71□□□□□ -1.66
VPS33A-203ENST00000536212 LINC00205P59089 165 aa4.71□□□□□ -1.66
VPS33A-203ENST00000536212 SELENOVP59797 346 aa4.71□□□□□ -1.66
VPS33A-203ENST00000536212 YPEL3P61236 119 aaPredicted RBP4.71□□□□□ -1.66
VPS33A-203ENST00000536212 ARG2P78540 354 aa4.71□□□□□ -1.66
VPS33A-203ENST00000536212 P2RY6Q15077 328 aa4.71□□□□□ -1.66
VPS33A-203ENST00000536212 POU2AF1Q16633 256 aa4.71□□□□□ -1.66
VPS33A-203ENST00000536212 GAGE13Q4V321 117 aa4.71□□□□□ -1.66
VPS33A-203ENST00000536212 ZNF664Q8N3J9 261 aa4.71□□□□□ -1.66
VPS33A-203ENST00000536212 GBGT1Q8N5D6 347 aa4.71□□□□□ -1.66
VPS33A-203ENST00000536212 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.71□□□□□ -1.66
VPS33A-203ENST00000536212 LRRC29Q8WV35 223 aa4.71□□□□□ -1.66
VPS33A-203ENST00000536212 TMEM18Q96B42 140 aa4.71□□□□□ -1.66
VPS33A-203ENST00000536212 MGST2Q99735 147 aa4.71□□□□□ -1.66
VPS33A-203ENST00000536212 DCTN5Q9BTE1 182 aa4.71□□□□□ -1.66
VPS33A-203ENST00000536212 NDUFAF3Q9BU61 184 aa4.71□□□□□ -1.66
VPS33A-203ENST00000536212 IFI27L2Q9H2X8 130 aa4.71□□□□□ -1.66
VPS33A-203ENST00000536212 ELOVL5Q9NYP7 299 aa4.71□□□□□ -1.66
VPS33A-203ENST00000536212 SLC45A2Q9UMX9 530 aa4.71□□□□□ -1.66
VPS33A-203ENST00000536212 RPH3ALQ9UNE2 315 aa4.71□□□□□ -1.66
VPS33A-203ENST00000536212 FUT9Q9Y231 359 aa4.71□□□□□ -1.66
VPS33A-203ENST00000536212 TCF19Q9Y242 345 aa4.71□□□□□ -1.66
VPS33A-203ENST00000536212 LY96Q9Y6Y9 160 aa4.71□□□□□ -1.66
VPS33A-203ENST00000536212 ARL2-SNX15V9GYD0 113 aa4.71□□□□□ -1.66
VPS33A-203ENST00000536212 IGKV1D-17A0A075B6S4 117 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 IGHV3-43A0A0B4J1X8 118 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 TRAV38-1A0A0B4J264 116 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 IGHV2OR16-5A0A0B4J2B6 119 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 IGHV1-18A0A0C4DH31 117 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 IGHV3-64DA0A0J9YX35 117 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 A0A1W2PPV4 95 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 C9JCJ5 164 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 M0R1X1 148 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 DLEU1O43261 78 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 FCGR3BO75015 233 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 AGFG2O95081 481 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 NDUFB4O95168 129 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 CGAP01215 116 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 LHBP01229 141 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 PPBPP02775 128 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 TFF1P04155 84 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 IL6RP08887 468 aaPredicted RBP4.7□□□□□ -1.66
VPS33A-203ENST00000536212 IGHV3-43DP0DP04 118 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 ESDP10768 282 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 AREGP15514 252 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 NDUFB7P17568 137 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 GCHFRP30047 84 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 RPL29P47914 159 aaKnown RBP4.7□□□□□ -1.66
VPS33A-203ENST00000536212 RAB7AP51149 207 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 EDDM3BP56851 147 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 ERVK-16P61578 105 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 SELENOTP62341 195 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 HOXA4Q00056 320 aaPredicted RBP4.7□□□□□ -1.66
VPS33A-203ENST00000536212 SPINK9Q5DT21 86 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 GCSAMLQ5JQS6 135 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 HES3Q5TGS1 186 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 PRAMEF5Q5TYX0 476 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 FAM78BQ5VT40 261 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 MIC13Q5XKP0 118 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 GCSAMQ8N6F7 178 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 TPRX1Q8N7U7 411 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 C9orf106Q8NAJ2 232 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 ZNF114Q8NC26 417 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 OR4A16Q8NH70 328 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 RFESDQ8TAC1 157 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 TMEM37Q8WXS4 190 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 SFRP2Q96HF1 295 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 TRIB1Q96RU8 372 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 SFXN3Q9BWM7 321 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 PRO1933Q9H354 126 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 LINC00574Q9H8X3 128 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 NPVFQ9HCQ7 196 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 ZNF71Q9NQZ8 489 aaPredicted RBP4.7□□□□□ -1.66
VPS33A-203ENST00000536212 SLC25A10Q9UBX3 287 aaPredicted RBP4.7□□□□□ -1.66
VPS33A-203ENST00000536212 FOXA2Q9Y261 457 aaPredicted RBP4.7□□□□□ -1.66
VPS33A-203ENST00000536212 SLC25A15Q9Y619 301 aa4.7□□□□□ -1.66
VPS33A-203ENST00000536212 ARHGAP21Q5T5U3 1957 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 TRBV20OR9-2A0A075B6H5 130 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 TRGV10A0A0A0MS01 117 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 TRAV3A0A0B4J244 114 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 KIR2DL5BA0A0G2JN68 375 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 KIR2DL5BA0A0G2JPC4 375 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 A0A0U1RQK1 487 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 MDFIC2A0A1B0GVS7 189 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms