RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 HIST1H1AQ02539 215 aaPredicted RBP2.69□□□□□ -1.98
CSMD3-210ENST00000534172 SLC25A11Q02978 314 aaKnown RBP2.69□□□□□ -1.98
CSMD3-210ENST00000534172 ENDOGQ14249 297 aaKnown RBP2.69□□□□□ -1.98
CSMD3-210ENST00000534172 ACOT6Q3I5F7 207 aaPredicted RBP2.69□□□□□ -1.98
CSMD3-210ENST00000534172 NSUN5P1Q3KNT7 163 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 OR10J3Q5JRS4 329 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 FAM162BQ5T6X4 162 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 Q6ZT83 130 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 MOB1BQ7L9L4 216 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 FAM19A1Q7Z5A9 133 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 ZNF676Q8N7Q3 588 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 CSNK1G2-AS1Q8NCQ2 148 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 ZNF740Q8NDX6 193 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 OR5A1Q8NGJ0 315 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 OR10G9Q8NGN4 311 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 OR5AR1Q8NGP9 310 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 Q8WTZ3 238 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 BLNKQ8WV28 456 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 LRRC58Q96CX6 371 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 IMP4Q96G21 291 aaKnown RBP2.69□□□□□ -1.98
CSMD3-210ENST00000534172 ZNF681Q96N22 645 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 TRIB3Q96RU7 358 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 ANAPC13Q9BS18 74 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 AGMATQ9BSE5 352 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 NDFIP1Q9BT67 221 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 GABARAPL3Q9BY60 117 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 TCEAL2Q9H3H9 227 aaPredicted RBP2.69□□□□□ -1.98
CSMD3-210ENST00000534172 CA10Q9NS85 328 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 TMEM242Q9NWH2 141 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 FUT9Q9Y231 359 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 PLIN4Q96Q06 1357 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 TRBV24-1A0A075B6N3 115 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 IGKV1D-8A0A087WSZ0 117 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 A0A1B0GW64 132 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 A0A1W2PPR1 153 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 A0A1W2PRE2 83 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 IGLC7A0M8Q6 106 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 MAP1LC3B2A6NCE7 125 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 FXYD1O00168 92 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 PIRO00625 290 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 XKRYO14609 159 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 EEF1E1O43324 174 aaKnown RBP2.69□□□□□ -1.98
CSMD3-210ENST00000534172 HLA-AP01891 365 aaKnown RBP2.69□□□□□ -1.98
CSMD3-210ENST00000534172 DBIP07108 87 aaKnown RBP2.69□□□□□ -1.98
CSMD3-210ENST00000534172 CD99P14209 185 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 NPY1RP25929 384 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 ARL2P36404 184 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 GUCA1AP43080 201 aaPredicted RBP2.69□□□□□ -1.98
CSMD3-210ENST00000534172 DIO3P55073 304 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 TAS2R20P59543 309 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 OR8B8Q15620 311 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 OLFML2AQ68BL7 652 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 ARL9Q6T311 187 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 Q6ZN92 141 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 FOXI2Q6ZQN5 318 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 ZNF567Q8N184 647 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 Q8N377 158 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 OR11G2Q8NGC1 345 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 OR5AK2Q8NH90 309 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 ITLN1Q8WWA0 313 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 MS4A6EQ96DS6 147 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 SLC25A38Q96DW6 304 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 PECRQ9BY49 303 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 SMIM3Q9BZL3 60 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 MAP1LC3BQ9GZQ8 125 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 OR51I2Q9H344 312 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 RDH14Q9HBH5 336 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 KCNJ16Q9NPI9 418 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 TMEM9BQ9NQ34 198 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 ZNF226Q9NYT6 803 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 CCDC167Q9P0B6 97 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 DHRS4-AS1Q9P1J3 65 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 OR1A1Q9P1Q5 309 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 ZNF256Q9Y2P7 627 aaPredicted RBP2.69□□□□□ -1.98
CSMD3-210ENST00000534172 COQ4Q9Y3A0 265 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 NEUROG3Q9Y4Z2 214 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 CSAG2Q9Y5P2 127 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 WSB1Q9Y6I7 421 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 PHF3Q92576 2039 aaKnown RBP2.69□□□□□ -1.98
CSMD3-210ENST00000534172 TRAV9-2A0A087WT02 112 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 A0A087WUU8 490 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 IGHV2-26A0A0B4J1V2 119 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 A0A0B4J2E0 115 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 CENPVL3A0A0U1RRI6 287 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 SPAARA0A1B0GVQ0 90 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 A0A1B0GX12 115 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 F6UB75 175 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 GEMIN2O14893 280 aaKnown RBP2.68□□□□□ -1.98
CSMD3-210ENST00000534172 UBL3O95164 117 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 HLA-DQB2P05538 268 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 TCN2P20062 427 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 SULT1A2P50226 295 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 RND2P52198 227 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 SUB1P53999 127 aaKnown RBP eCLIP2.68□□□□□ -1.98
CSMD3-210ENST00000534172 TGFBR3Q03167 851 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 GINS1Q14691 196 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 GUSBP1Q15486 140 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 ZNF726P1Q15940 193 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 TDRG1Q3Y452 100 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 TMEM97Q5BJF2 176 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms