RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 LSM6P62312 80 aaKnown RBP0.52□□□□□ -2.33
BRCA2-205ENST00000533776 RUNX1Q01196 453 aa0.52□□□□□ -2.33
BRCA2-205ENST00000533776 GNA12Q03113 381 aa0.52□□□□□ -2.33
BRCA2-205ENST00000533776 NNATQ16517 81 aa0.52□□□□□ -2.33
BRCA2-205ENST00000533776 OGFRL1Q5TC84 451 aaPredicted RBP0.52□□□□□ -2.33
BRCA2-205ENST00000533776 FAM27BQ5VT28 67 aa0.52□□□□□ -2.33
BRCA2-205ENST00000533776 PTRHD1Q6GMV3 140 aaKnown RBP0.52□□□□□ -2.33
BRCA2-205ENST00000533776 C5orf46Q6UWT4 87 aa0.52□□□□□ -2.33
BRCA2-205ENST00000533776 ZNF565Q8N9K5 539 aa0.52□□□□□ -2.33
BRCA2-205ENST00000533776 ZNF439Q8NDP4 499 aa0.52□□□□□ -2.33
BRCA2-205ENST00000533776 OR51D1Q8NGF3 324 aa0.52□□□□□ -2.33
BRCA2-205ENST00000533776 CHST6Q9GZX3 395 aa0.52□□□□□ -2.33
BRCA2-205ENST00000533776 XAGE1AQ9HD64 81 aa0.52□□□□□ -2.33
BRCA2-205ENST00000533776 PAQR5Q9NXK6 330 aaPredicted RBP0.52□□□□□ -2.33
BRCA2-205ENST00000533776 MRPL27Q9P0M9 148 aaKnown RBP0.52□□□□□ -2.33
BRCA2-205ENST00000533776 TIMM22Q9Y584 194 aa0.52□□□□□ -2.33
BRCA2-205ENST00000533776 LHFPL6Q9Y693 200 aa0.52□□□□□ -2.33
BRCA2-205ENST00000533776 FLT4P35916 1363 aa0.52□□□□□ -2.33
BRCA2-205ENST00000533776 ROBO3Q96MS0 1386 aa0.52□□□□□ -2.33
BRCA2-205ENST00000533776 NUP160Q12769 1436 aa0.52□□□□□ -2.33
BRCA2-205ENST00000533776 ZNF106Q9H2Y7 1883 aaKnown RBP0.52□□□□□ -2.33
BRCA2-205ENST00000533776 MICAL3Q7RTP6 2002 aa0.52□□□□□ -2.33
BRCA2-205ENST00000533776 BAZ2BQ9UIF8 2168 aaKnown RBP0.52□□□□□ -2.33
BRCA2-205ENST00000533776 IGKV3-7A0A075B6H7 116 aa0.51□□□□□ -2.33
BRCA2-205ENST00000533776 GOLGA6L19H0YKK7 550 aa0.51□□□□□ -2.33
BRCA2-205ENST00000533776 I3L521 148 aa0.51□□□□□ -2.33
BRCA2-205ENST00000533776 KPNA3O00505 521 aaPredicted RBP0.51□□□□□ -2.33
BRCA2-205ENST00000533776 DCTN3O75935 186 aa0.51□□□□□ -2.33
BRCA2-205ENST00000533776 LYPLA2O95372 231 aa0.51□□□□□ -2.33
BRCA2-205ENST00000533776 APOEP02649 317 aa0.51□□□□□ -2.33
BRCA2-205ENST00000533776 CRPP02741 224 aa0.51□□□□□ -2.33
BRCA2-205ENST00000533776 SHBGP04278 402 aa0.51□□□□□ -2.33
BRCA2-205ENST00000533776 TCRBP04435 133 aa0.51□□□□□ -2.33
BRCA2-205ENST00000533776 IFNA16P05015 189 aa0.51□□□□□ -2.33
BRCA2-205ENST00000533776 CALB1P05937 261 aa0.51□□□□□ -2.33
BRCA2-205ENST00000533776 SRP19P09132 144 aaKnown RBP0.51□□□□□ -2.33
BRCA2-205ENST00000533776 AKR1C3P42330 323 aa0.51□□□□□ -2.33
BRCA2-205ENST00000533776 AP2S1P53680 142 aaPredicted RBP0.51□□□□□ -2.33
BRCA2-205ENST00000533776 RPS20P60866 119 aaKnown RBP0.51□□□□□ -2.33
BRCA2-205ENST00000533776 ERVS71-1P61550 626 aa0.51□□□□□ -2.33
BRCA2-205ENST00000533776 POLR2GP62487 172 aaKnown RBP eCLIP0.51□□□□□ -2.33
BRCA2-205ENST00000533776 SUPT4H1P63272 117 aaKnown RBP0.51□□□□□ -2.33
BRCA2-205ENST00000533776 MOGQ16653 247 aa0.51□□□□□ -2.33
BRCA2-205ENST00000533776 HIST3H3Q16695 136 aa0.51□□□□□ -2.33
BRCA2-205ENST00000533776 Q1T7F1 81 aa0.51□□□□□ -2.33
BRCA2-205ENST00000533776 ACOT6Q3I5F7 207 aaPredicted RBP0.51□□□□□ -2.33
BRCA2-205ENST00000533776 TMEM42Q69YG0 159 aa0.51□□□□□ -2.33
BRCA2-205ENST00000533776 C8orf74Q6P047 294 aa0.51□□□□□ -2.33
BRCA2-205ENST00000533776 UNQ6190/PRO20217Q6UXQ8 127 aa0.51□□□□□ -2.33
BRCA2-205ENST00000533776 HIST2H3AQ71DI3 136 aa0.51□□□□□ -2.33
BRCA2-205ENST00000533776 KTN1-AS1Q86SY8 53 aa0.51□□□□□ -2.33
BRCA2-205ENST00000533776 RTTNQ86VV8 2226 aa0.51□□□□□ -2.33
BRCA2-205ENST00000533776 C12orf45Q8N5I9 185 aaPredicted RBP0.51□□□□□ -2.33
BRCA2-205ENST00000533776 RPP25LQ8N5L8 163 aaKnown RBP0.51□□□□□ -2.33
BRCA2-205ENST00000533776 RASSF5Q8WWW0 418 aa0.51□□□□□ -2.33
BRCA2-205ENST00000533776 ANKRD7Q92527 254 aa0.51□□□□□ -2.33
BRCA2-205ENST00000533776 NEO1Q92859 1461 aa0.51□□□□□ -2.33
BRCA2-205ENST00000533776 C12orf43Q96C57 262 aaKnown RBP0.51□□□□□ -2.33
BRCA2-205ENST00000533776 CNBD2Q96M20 576 aa0.51□□□□□ -2.33
BRCA2-205ENST00000533776 PRAP1Q96NZ9 151 aa0.51□□□□□ -2.33
BRCA2-205ENST00000533776 PPP1R2P1Q96PQ5 205 aa0.51□□□□□ -2.33
BRCA2-205ENST00000533776 CST9LQ9H4G1 147 aa0.51□□□□□ -2.33
BRCA2-205ENST00000533776 DOCK5Q9H7D0 1870 aa0.51□□□□□ -2.33
BRCA2-205ENST00000533776 UCK1Q9HA47 277 aa0.51□□□□□ -2.33
BRCA2-205ENST00000533776 IL36BQ9NZH7 164 aa0.51□□□□□ -2.33
BRCA2-205ENST00000533776 FUT9Q9Y231 359 aa0.51□□□□□ -2.33
BRCA2-205ENST00000533776 PKIGQ9Y2B9 76 aa0.51□□□□□ -2.33
BRCA2-205ENST00000533776 FBN2P35556 2912 aa0.5□□□□□ -2.33
BRCA2-205ENST00000533776 TONSLQ96HA7 1378 aa0.5□□□□□ -2.33
BRCA2-205ENST00000533776 A0A087WUJ7 227 aa0.5□□□□□ -2.33
BRCA2-205ENST00000533776 FAAHO00519 579 aa0.5□□□□□ -2.33
BRCA2-205ENST00000533776 KLRC4O43908 158 aa0.5□□□□□ -2.33
BRCA2-205ENST00000533776 IGHV3-7P01780 117 aa0.5□□□□□ -2.33
BRCA2-205ENST00000533776 C1QAP02745 245 aa0.5□□□□□ -2.33
BRCA2-205ENST00000533776 PPBPP02775 128 aa0.5□□□□□ -2.33
BRCA2-205ENST00000533776 RPL5P46777 297 aaKnown RBP0.5□□□□□ -2.33
BRCA2-205ENST00000533776 RAB13P51153 203 aa0.5□□□□□ -2.33
BRCA2-205ENST00000533776 ZNF80P51504 273 aaPredicted RBP0.5□□□□□ -2.33
BRCA2-205ENST00000533776 OR4D2P58180 307 aa0.5□□□□□ -2.33
BRCA2-205ENST00000533776 CCL20P78556 96 aa0.5□□□□□ -2.33
BRCA2-205ENST00000533776 FABP9Q0Z7S8 132 aa0.5□□□□□ -2.33
BRCA2-205ENST00000533776 CDK5R1Q15078 307 aa0.5□□□□□ -2.33
BRCA2-205ENST00000533776 Q6ZS49 121 aa0.5□□□□□ -2.33
BRCA2-205ENST00000533776 FP248Q71RG6 208 aaPredicted RBP0.5□□□□□ -2.33
BRCA2-205ENST00000533776 SLC51BQ86UW2 128 aa0.5□□□□□ -2.33
BRCA2-205ENST00000533776 LRRC25Q8N386 305 aaPredicted RBP0.5□□□□□ -2.33
BRCA2-205ENST00000533776 C15orf53Q8NAA6 179 aa0.5□□□□□ -2.33
BRCA2-205ENST00000533776 ROPN1LQ96C74 230 aa0.5□□□□□ -2.33
BRCA2-205ENST00000533776 TSPAN32Q96QS1 320 aa0.5□□□□□ -2.33
BRCA2-205ENST00000533776 DOHHQ9BU89 302 aa0.5□□□□□ -2.33
BRCA2-205ENST00000533776 DERL1Q9BUN8 251 aa0.5□□□□□ -2.33
BRCA2-205ENST00000533776 EFCAB1Q9HAE3 211 aa0.5□□□□□ -2.33
BRCA2-205ENST00000533776 RSL24D1Q9UHA3 163 aaKnown RBP0.5□□□□□ -2.33
BRCA2-205ENST00000533776 NAT8Q9UHE5 227 aa0.5□□□□□ -2.33
BRCA2-205ENST00000533776 FREM1Q5H8C1 2179 aa0.5□□□□□ -2.33
BRCA2-205ENST00000533776 CCDC144AA2RUR9 1427 aa0.49□□□□□ -2.33
BRCA2-205ENST00000533776 NUP155O75694 1391 aa0.49□□□□□ -2.33
BRCA2-205ENST00000533776 TRAV38-1A0A0B4J264 116 aa0.49□□□□□ -2.33
BRCA2-205ENST00000533776 FAM236DA0A1B0GTK5 79 aa0.49□□□□□ -2.33
BRCA2-205ENST00000533776 SMIM9A6NGZ8 99 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms