RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 WDR12Q9GZL7 423 aaKnown RBP9.37□□□□□ -0.91
CAPRIN1-213ENST00000533562 PLEKHA3Q9HB20 300 aa9.37□□□□□ -0.91
CAPRIN1-213ENST00000533562 ZC4H2Q9NQZ6 224 aa9.37□□□□□ -0.91
CAPRIN1-213ENST00000533562 TMEM140Q9NV12 185 aa9.37□□□□□ -0.91
CAPRIN1-213ENST00000533562 COMMD9Q9P000 198 aa9.37□□□□□ -0.91
CAPRIN1-213ENST00000533562 S4R3C0 116 aa9.37□□□□□ -0.91
CAPRIN1-213ENST00000533562 TRAV3A0A0B4J244 114 aa9.36□□□□□ -0.91
CAPRIN1-213ENST00000533562 CGB1A6NKQ9 187 aa9.36□□□□□ -0.91
CAPRIN1-213ENST00000533562 OR11H12B2RN74 326 aa9.36□□□□□ -0.91
CAPRIN1-213ENST00000533562 BOLA2-SMG1P6H3BVE0 249 aa9.36□□□□□ -0.91
CAPRIN1-213ENST00000533562 CD7P09564 240 aa9.36□□□□□ -0.91
CAPRIN1-213ENST00000533562 F2RP25116 425 aa9.36□□□□□ -0.91
CAPRIN1-213ENST00000533562 PTBP1P26599 531 aaKnown RBP eCLIP9.36□□□□□ -0.91
CAPRIN1-213ENST00000533562 PRSS3P35030 304 aa9.36□□□□□ -0.91
CAPRIN1-213ENST00000533562 EIF2B2P49770 351 aaKnown RBP9.36□□□□□ -0.91
CAPRIN1-213ENST00000533562 ANKRD55Q3KP44 614 aa9.36□□□□□ -0.91
CAPRIN1-213ENST00000533562 ZNF57Q68EA5 555 aaPredicted RBP9.36□□□□□ -0.91
CAPRIN1-213ENST00000533562 ZFAND6Q6FIF0 208 aa9.36□□□□□ -0.91
CAPRIN1-213ENST00000533562 LINC00322Q6ZN03 302 aaPredicted RBP9.36□□□□□ -0.91
CAPRIN1-213ENST00000533562 SLC16A13Q7RTY0 426 aa9.36□□□□□ -0.91
CAPRIN1-213ENST00000533562 HSD17B13Q7Z5P4 300 aaPredicted RBP9.36□□□□□ -0.91
CAPRIN1-213ENST00000533562 DEFB125Q8N687 156 aa9.36□□□□□ -0.91
CAPRIN1-213ENST00000533562 OR5H2Q8NGV7 314 aa9.36□□□□□ -0.91
CAPRIN1-213ENST00000533562 OR6F1Q8NGZ6 308 aa9.36□□□□□ -0.91
CAPRIN1-213ENST00000533562 BCL7BQ9BQE9 202 aa9.36□□□□□ -0.91
CAPRIN1-213ENST00000533562 ZNF2Q9BSG1 426 aaPredicted RBP9.36□□□□□ -0.91
CAPRIN1-213ENST00000533562 QTRT1Q9BXR0 403 aaKnown RBP9.36□□□□□ -0.91
CAPRIN1-213ENST00000533562 IGLC7A0M8Q6 106 aa9.35□□□□□ -0.91
CAPRIN1-213ENST00000533562 A8MWP6 167 aa9.35□□□□□ -0.91
CAPRIN1-213ENST00000533562 PGLYRP1O75594 196 aaPredicted RBP9.35□□□□□ -0.91
CAPRIN1-213ENST00000533562 S1PR2O95136 353 aa9.35□□□□□ -0.91
CAPRIN1-213ENST00000533562 PMP2P02689 132 aa9.35□□□□□ -0.91
CAPRIN1-213ENST00000533562 TRAPPC2P0DI81 140 aa9.35□□□□□ -0.91
CAPRIN1-213ENST00000533562 TRAPPC2BP0DI82 140 aa9.35□□□□□ -0.91
CAPRIN1-213ENST00000533562 TGFBR1P36897 503 aa9.35□□□□□ -0.91
CAPRIN1-213ENST00000533562 TAS2R20P59543 309 aa9.35□□□□□ -0.91
CAPRIN1-213ENST00000533562 LSM3P62310 102 aaKnown RBP9.35□□□□□ -0.91
CAPRIN1-213ENST00000533562 PLET1Q6UQ28 207 aa9.35□□□□□ -0.91
CAPRIN1-213ENST00000533562 CENPSQ8N2Z9 138 aa9.35□□□□□ -0.91
CAPRIN1-213ENST00000533562 UXS1Q8NBZ7 420 aa9.35□□□□□ -0.91
CAPRIN1-213ENST00000533562 OR1L8Q8NGR8 309 aa9.35□□□□□ -0.91
CAPRIN1-213ENST00000533562 IL17DQ8TAD2 202 aa9.35□□□□□ -0.91
CAPRIN1-213ENST00000533562 MARC2Q969Z3 335 aa9.35□□□□□ -0.91
CAPRIN1-213ENST00000533562 MOB3AQ96BX8 217 aa9.35□□□□□ -0.91
CAPRIN1-213ENST00000533562 YIPF6Q96EC8 236 aa9.35□□□□□ -0.91
CAPRIN1-213ENST00000533562 WDR89Q96FK6 387 aaPredicted RBP9.35□□□□□ -0.91
CAPRIN1-213ENST00000533562 ANAPC10Q9UM13 185 aa9.35□□□□□ -0.91
CAPRIN1-213ENST00000533562 DYNC2H1Q8NCM8 4307 aaKnown RBP9.35□□□□□ -0.91
CAPRIN1-213ENST00000533562 TEX50A0A1B0GTY4 177 aa9.34□□□□□ -0.91
CAPRIN1-213ENST00000533562 TMEM213A2RRL7 107 aa9.34□□□□□ -0.91
CAPRIN1-213ENST00000533562 MFSD2BA6NFX1 497 aa9.34□□□□□ -0.91
CAPRIN1-213ENST00000533562 MARCH11A6NNE9 402 aa9.34□□□□□ -0.91
CAPRIN1-213ENST00000533562 RGS13O14921 159 aa9.34□□□□□ -0.91
CAPRIN1-213ENST00000533562 SNAPC5O75971 98 aa9.34□□□□□ -0.91
CAPRIN1-213ENST00000533562 RLN1P04808 185 aa9.34□□□□□ -0.91
CAPRIN1-213ENST00000533562 SERPINE2P07093 398 aa9.34□□□□□ -0.91
CAPRIN1-213ENST00000533562 OR13C7P0DN81 318 aa9.34□□□□□ -0.91
CAPRIN1-213ENST00000533562 RPA2P15927 270 aa9.34□□□□□ -0.91
CAPRIN1-213ENST00000533562 NAT1P18440 290 aa9.34□□□□□ -0.91
CAPRIN1-213ENST00000533562 EDN2P20800 178 aa9.34□□□□□ -0.91
CAPRIN1-213ENST00000533562 S100GP29377 79 aa9.34□□□□□ -0.91
CAPRIN1-213ENST00000533562 TMBIM6P55061 237 aa9.34□□□□□ -0.91
CAPRIN1-213ENST00000533562 ZNF846Q147U1 533 aa9.34□□□□□ -0.91
CAPRIN1-213ENST00000533562 TRIM16LQ309B1 348 aa9.34□□□□□ -0.91
CAPRIN1-213ENST00000533562 LPCAT3Q6P1A2 487 aa9.34□□□□□ -0.91
CAPRIN1-213ENST00000533562 CADM3Q8N126 398 aa9.34□□□□□ -0.91
CAPRIN1-213ENST00000533562 GDPD1Q8N9F7 314 aa9.34□□□□□ -0.91
CAPRIN1-213ENST00000533562 OR10W1Q8NGF6 305 aa9.34□□□□□ -0.91
CAPRIN1-213ENST00000533562 OR52B4Q8NGK2 314 aa9.34□□□□□ -0.91
CAPRIN1-213ENST00000533562 ZNF502Q8TBZ5 544 aa9.34□□□□□ -0.91
CAPRIN1-213ENST00000533562 VN1R17PQ8TDU5 208 aa9.34□□□□□ -0.91
CAPRIN1-213ENST00000533562 CACNG8Q8WXS5 425 aa9.34□□□□□ -0.91
CAPRIN1-213ENST00000533562 SLC25A46Q96AG3 418 aa9.34□□□□□ -0.91
CAPRIN1-213ENST00000533562 HIPK2Q9H2X6 1198 aa9.34□□□□□ -0.91
CAPRIN1-213ENST00000533562 SRD5A3Q9H8P0 318 aa9.34□□□□□ -0.91
CAPRIN1-213ENST00000533562 FKBP11Q9NYL4 201 aa9.34□□□□□ -0.91
CAPRIN1-213ENST00000533562 MRPL27Q9P0M9 148 aaKnown RBP9.34□□□□□ -0.91
CAPRIN1-213ENST00000533562 UFC1Q9Y3C8 167 aa9.34□□□□□ -0.91
CAPRIN1-213ENST00000533562 TRAV25A0A0B4J276 109 aa9.33□□□□□ -0.92
CAPRIN1-213ENST00000533562 RBMY1BA6NDE4 496 aaKnown RBP9.33□□□□□ -0.92
CAPRIN1-213ENST00000533562 RBMY1EA6NEQ0 496 aaKnown RBP9.33□□□□□ -0.92
CAPRIN1-213ENST00000533562 GPR31O00270 319 aa9.33□□□□□ -0.92
CAPRIN1-213ENST00000533562 KRASP01116 189 aa9.33□□□□□ -0.92
CAPRIN1-213ENST00000533562 RBMY1DP0C7P1 496 aaKnown RBP9.33□□□□□ -0.92
CAPRIN1-213ENST00000533562 GPR183P32249 361 aa9.33□□□□□ -0.92
CAPRIN1-213ENST00000533562 LPAR6P43657 344 aa9.33□□□□□ -0.92
CAPRIN1-213ENST00000533562 ELLP55199 621 aaPredicted RBP9.33□□□□□ -0.92
CAPRIN1-213ENST00000533562 TSPAN5P62079 268 aa9.33□□□□□ -0.92
CAPRIN1-213ENST00000533562 ZNF585BQ52M93 769 aa9.33□□□□□ -0.92
CAPRIN1-213ENST00000533562 TM4SF20Q53R12 229 aa9.33□□□□□ -0.92
CAPRIN1-213ENST00000533562 SLC25A24Q6NUK1 477 aa9.33□□□□□ -0.92
CAPRIN1-213ENST00000533562 RBPMS2Q6ZRY4 209 aaKnown RBP9.33□□□□□ -0.92
CAPRIN1-213ENST00000533562 LYSMD2Q8IV50 215 aa9.33□□□□□ -0.92
CAPRIN1-213ENST00000533562 TMEM61Q8N0U2 210 aa9.33□□□□□ -0.92
CAPRIN1-213ENST00000533562 FCAMRQ8WWV6 532 aa9.33□□□□□ -0.92
CAPRIN1-213ENST00000533562 CMTM3Q96MX0 182 aa9.33□□□□□ -0.92
CAPRIN1-213ENST00000533562 NDUFA4L2Q9NRX3 87 aa9.33□□□□□ -0.92
CAPRIN1-213ENST00000533562 MLXQ9UH92 298 aa9.33□□□□□ -0.92
CAPRIN1-213ENST00000533562 LCE6AA0A183 80 aa9.32□□□□□ -0.92
CAPRIN1-213ENST00000533562 TGOLN2O43493 480 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms