RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 LYPD2Q6UXB3 125 aa12.52□□□□□ -0.41
CACNA1E-208ENST00000533229 MOB3BQ86TA1 216 aa12.52□□□□□ -0.41
CACNA1E-208ENST00000533229 NEUROG1Q92886 237 aa12.52□□□□□ -0.41
CACNA1E-208ENST00000533229 FAM122AQ96E09 287 aa12.52□□□□□ -0.41
CACNA1E-208ENST00000533229 ELOVL1Q9BW60 279 aa12.52□□□□□ -0.41
CACNA1E-208ENST00000533229 UPK2O00526 184 aa12.51□□□□□ -0.41
CACNA1E-208ENST00000533229 NDUFS6O75380 124 aaKnown RBP12.51□□□□□ -0.41
CACNA1E-208ENST00000533229 FOXC1Q12948 553 aa12.51□□□□□ -0.41
CACNA1E-208ENST00000533229 TEPPQ6URK8 271 aa12.51□□□□□ -0.41
CACNA1E-208ENST00000533229 ZGRF1Q86YA3 2104 aa12.51□□□□□ -0.41
CACNA1E-208ENST00000533229 PCNX1Q96RV3 2341 aa12.51□□□□□ -0.41
CACNA1E-208ENST00000533229 PPIAL4EA0A075B759 164 aa12.5□□□□□ -0.41
CACNA1E-208ENST00000533229 NKX6-3A6NJ46 265 aa12.5□□□□□ -0.41
CACNA1E-208ENST00000533229 PPIAL4DF5H284 164 aa12.5□□□□□ -0.41
CACNA1E-208ENST00000533229 PPIAL4FP0DN26 164 aa12.5□□□□□ -0.41
CACNA1E-208ENST00000533229 CLEC12BQ2HXU8 276 aa12.5□□□□□ -0.41
CACNA1E-208ENST00000533229 PDZD11Q5EBL8 140 aa12.5□□□□□ -0.41
CACNA1E-208ENST00000533229 C9orf152Q5JTZ5 239 aa12.5□□□□□ -0.41
CACNA1E-208ENST00000533229 SPATA31B1PQ5VZV4 182 aa12.5□□□□□ -0.41
CACNA1E-208ENST00000533229 ZNF833PQ6ZTB9 187 aa12.5□□□□□ -0.41
CACNA1E-208ENST00000533229 STPG3Q8N7X2 389 aa12.5□□□□□ -0.41
CACNA1E-208ENST00000533229 TMEM204Q9BSN7 226 aa12.5□□□□□ -0.41
CACNA1E-208ENST00000533229 MRPL20Q9BYC9 149 aaKnown RBP12.5□□□□□ -0.41
CACNA1E-208ENST00000533229 ENY2Q9NPA8 101 aa12.5□□□□□ -0.41
CACNA1E-208ENST00000533229 AURKAIP1Q9NWT8 199 aaPredicted RBP12.5□□□□□ -0.41
CACNA1E-208ENST00000533229 PPIAL4AQ9Y536 164 aa12.5□□□□□ -0.41
CACNA1E-208ENST00000533229 TEX50A0A1B0GTY4 177 aa12.5□□□□□ -0.41
CACNA1E-208ENST00000533229 TNFRSF13BO14836 293 aaPredicted RBP12.5□□□□□ -0.41
CACNA1E-208ENST00000533229 SOX15O60248 233 aa12.5□□□□□ -0.41
CACNA1E-208ENST00000533229 NDUFB4O95168 129 aa12.5□□□□□ -0.41
CACNA1E-208ENST00000533229 SOD3P08294 240 aa12.5□□□□□ -0.41
CACNA1E-208ENST00000533229 SAA1P0DJI8 122 aaPredicted RBP12.5□□□□□ -0.41
CACNA1E-208ENST00000533229 IGFBP2P18065 325 aa12.5□□□□□ -0.41
CACNA1E-208ENST00000533229 PRCDQ00LT1 54 aa12.5□□□□□ -0.41
CACNA1E-208ENST00000533229 DIAPH2-AS1Q14236 149 aa12.5□□□□□ -0.41
CACNA1E-208ENST00000533229 OR5T1Q8NG75 326 aa12.5□□□□□ -0.41
CACNA1E-208ENST00000533229 PYGO2Q9BRQ0 406 aa12.5□□□□□ -0.41
CACNA1E-208ENST00000533229 LRFN3Q9BTN0 628 aa12.5□□□□□ -0.41
CACNA1E-208ENST00000533229 PRNDQ9UKY0 176 aa12.5□□□□□ -0.41
CACNA1E-208ENST00000533229 REG1BP48304 166 aa12.49□□□□□ -0.41
CACNA1E-208ENST00000533229 MEF2CQ06413 473 aaPredicted RBP12.49□□□□□ -0.41
CACNA1E-208ENST00000533229 EFNB3Q15768 340 aa12.49□□□□□ -0.41
CACNA1E-208ENST00000533229 RTL8BQ17RB0 113 aa12.49□□□□□ -0.41
CACNA1E-208ENST00000533229 TMEM30BQ3MIR4 351 aa12.49□□□□□ -0.41
CACNA1E-208ENST00000533229 ZNF714Q96N38 554 aa12.49□□□□□ -0.41
CACNA1E-208ENST00000533229 GAL3ST2Q9H3Q3 398 aa12.49□□□□□ -0.41
CACNA1E-208ENST00000533229 TMEM106BQ9NUM4 274 aa12.49□□□□□ -0.41
CACNA1E-208ENST00000533229 CTSZQ9UBR2 303 aa12.49□□□□□ -0.41
CACNA1E-208ENST00000533229 ZNF257Q9Y2Q1 563 aa12.49□□□□□ -0.41
CACNA1E-208ENST00000533229 TANC2Q9HCD6 1990 aa12.49□□□□□ -0.41
CACNA1E-208ENST00000533229 PGPEP1LA6NFU8 196 aa12.49□□□□□ -0.41
CACNA1E-208ENST00000533229 SHISA9B4DS77 424 aa12.49□□□□□ -0.41
CACNA1E-208ENST00000533229 H7BYZ3 331 aa12.49□□□□□ -0.41
CACNA1E-208ENST00000533229 PDE6DO43924 150 aa12.49□□□□□ -0.41
CACNA1E-208ENST00000533229 FOXH1O75593 365 aa12.49□□□□□ -0.41
CACNA1E-208ENST00000533229 GALR1P47211 349 aa12.49□□□□□ -0.41
CACNA1E-208ENST00000533229 MLANAQ16655 118 aa12.49□□□□□ -0.41
CACNA1E-208ENST00000533229 DMRTC2Q8IXT2 367 aaPredicted RBP12.49□□□□□ -0.41
CACNA1E-208ENST00000533229 LINC00469Q8N7U9 141 aa12.49□□□□□ -0.41
CACNA1E-208ENST00000533229 ZNF114Q8NC26 417 aa12.49□□□□□ -0.41
CACNA1E-208ENST00000533229 OR10W1Q8NGF6 305 aa12.49□□□□□ -0.41
CACNA1E-208ENST00000533229 RNASE6Q93091 150 aaKnown RBP12.49□□□□□ -0.41
CACNA1E-208ENST00000533229 SCNM1Q9BWG6 230 aa12.49□□□□□ -0.41
CACNA1E-208ENST00000533229 PLEKHA3Q9HB20 300 aa12.49□□□□□ -0.41
CACNA1E-208ENST00000533229 DMRT1Q9Y5R6 373 aa12.49□□□□□ -0.41
CACNA1E-208ENST00000533229 IGKV1OR2-108A0A075B7D4 117 aa12.48□□□□□ -0.41
CACNA1E-208ENST00000533229 LINC01551Q86U37 167 aa12.48□□□□□ -0.41
CACNA1E-208ENST00000533229 OR10A7Q8NGE5 316 aa12.48□□□□□ -0.41
CACNA1E-208ENST00000533229 H1FXQ92522 213 aaKnown RBP12.48□□□□□ -0.41
CACNA1E-208ENST00000533229 GPR61Q9BZJ8 451 aa12.48□□□□□ -0.41
CACNA1E-208ENST00000533229 KCNIP2Q9NS61 270 aa12.48□□□□□ -0.41
CACNA1E-208ENST00000533229 GAR1Q9NY12 217 aaKnown RBP12.48□□□□□ -0.41
CACNA1E-208ENST00000533229 PKDREJQ9NTG1 2253 aa12.48□□□□□ -0.41
CACNA1E-208ENST00000533229 TRBV20OR9-2A0A075B6H5 130 aa12.47□□□□□ -0.41
CACNA1E-208ENST00000533229 E7EQL1 145 aa12.47□□□□□ -0.41
CACNA1E-208ENST00000533229 E7EUB6 86 aa12.47□□□□□ -0.41
CACNA1E-208ENST00000533229 H0YJW9 148 aa12.47□□□□□ -0.41
CACNA1E-208ENST00000533229 VENTXO95231 258 aa12.47□□□□□ -0.41
CACNA1E-208ENST00000533229 CXorf1O96002 111 aa12.47□□□□□ -0.41
CACNA1E-208ENST00000533229 LINC00869P0C866 280 aa12.47□□□□□ -0.41
CACNA1E-208ENST00000533229 S100A2P29034 98 aa12.47□□□□□ -0.41
CACNA1E-208ENST00000533229 RPL29P47914 159 aaKnown RBP12.47□□□□□ -0.41
CACNA1E-208ENST00000533229 PRR20EP86478 221 aa12.47□□□□□ -0.41
CACNA1E-208ENST00000533229 PRR20CP86479 221 aa12.47□□□□□ -0.41
CACNA1E-208ENST00000533229 PRR20DP86480 221 aa12.47□□□□□ -0.41
CACNA1E-208ENST00000533229 PRR20BP86481 221 aa12.47□□□□□ -0.41
CACNA1E-208ENST00000533229 PRR20AP86496 221 aa12.47□□□□□ -0.41
CACNA1E-208ENST00000533229 HIST3H2BBQ8N257 126 aa12.47□□□□□ -0.41
CACNA1E-208ENST00000533229 OR10D4PQ8NGN7 298 aa12.47□□□□□ -0.41
CACNA1E-208ENST00000533229 BET1LQ9NYM9 111 aa12.47□□□□□ -0.41
CACNA1E-208ENST00000533229 YTHDF2Q9Y5A9 579 aaKnown RBP12.47□□□□□ -0.41
CACNA1E-208ENST00000533229 YLPM1P49750 1951 aaKnown RBP12.47□□□□□ -0.41
CACNA1E-208ENST00000533229 K7ENP7 123 aa12.47□□□□□ -0.41
CACNA1E-208ENST00000533229 FAM87AP0C7U9 286 aa12.47□□□□□ -0.41
CACNA1E-208ENST00000533229 OR5AN1Q8NGI8 311 aa12.47□□□□□ -0.41
CACNA1E-208ENST00000533229 OR4X1Q8NH49 305 aa12.47□□□□□ -0.41
CACNA1E-208ENST00000533229 PCGF1Q9BSM1 259 aa12.47□□□□□ -0.41
CACNA1E-208ENST00000533229 SRD5A3Q9H8P0 318 aa12.47□□□□□ -0.41
CACNA1E-208ENST00000533229 TNCP24821 2201 aa12.46□□□□□ -0.41
CACNA1E-208ENST00000533229 DVL1O14640 695 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms