RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 SRSF4Q08170 494 aaKnown RBP8.82□□□□□ -1
TRAPPC4-211ENST00000533012 C10orf55Q5SWW7 151 aa8.82□□□□□ -1
TRAPPC4-211ENST00000533012 TMEM65Q6PI78 240 aa8.82□□□□□ -1
TRAPPC4-211ENST00000533012 LYG2Q86SG7 212 aa8.82□□□□□ -1
TRAPPC4-211ENST00000533012 SLC35G3Q8N808 338 aa8.82□□□□□ -1
TRAPPC4-211ENST00000533012 C11orf44Q8N8P7 122 aa8.82□□□□□ -1
TRAPPC4-211ENST00000533012 OR5T1Q8NG75 326 aa8.82□□□□□ -1
TRAPPC4-211ENST00000533012 OR5M8Q8NGP6 311 aa8.82□□□□□ -1
TRAPPC4-211ENST00000533012 OR1L8Q8NGR8 309 aa8.82□□□□□ -1
TRAPPC4-211ENST00000533012 COQ8AQ8NI60 647 aa8.82□□□□□ -1
TRAPPC4-211ENST00000533012 LHFPL5Q8TAF8 219 aa8.82□□□□□ -1
TRAPPC4-211ENST00000533012 LSM10Q969L4 123 aaKnown RBP8.82□□□□□ -1
TRAPPC4-211ENST00000533012 SHPKQ9UHJ6 478 aa8.82□□□□□ -1
TRAPPC4-211ENST00000533012 FOXA2Q9Y261 457 aaPredicted RBP8.82□□□□□ -1
TRAPPC4-211ENST00000533012 OR51B2Q9Y5P1 312 aa8.82□□□□□ -1
TRAPPC4-211ENST00000533012 A0A1W2PN81 502 aa8.81□□□□□ -1
TRAPPC4-211ENST00000533012 DUXBA0A1W2PPF3 345 aa8.81□□□□□ -1
TRAPPC4-211ENST00000533012 TCRBV4S1A1TA0A5B7 111 aa8.81□□□□□ -1
TRAPPC4-211ENST00000533012 E7EUB6 86 aa8.81□□□□□ -1
TRAPPC4-211ENST00000533012 DUS4LO95620 317 aaKnown RBP8.81□□□□□ -1
TRAPPC4-211ENST00000533012 IGHG4P01861 327 aa8.81□□□□□ -1
TRAPPC4-211ENST00000533012 ELANEP08246 267 aa8.81□□□□□ -1
TRAPPC4-211ENST00000533012 P0C879 139 aa8.81□□□□□ -1
TRAPPC4-211ENST00000533012 APELAP0DMC3 54 aa8.81□□□□□ -1
TRAPPC4-211ENST00000533012 CD28P10747 220 aa8.81□□□□□ -1
TRAPPC4-211ENST00000533012 MYOD1P15172 320 aa8.81□□□□□ -1
TRAPPC4-211ENST00000533012 CHRNA7P36544 502 aa8.81□□□□□ -1
TRAPPC4-211ENST00000533012 OR2B8PP59922 312 aa8.81□□□□□ -1
TRAPPC4-211ENST00000533012 HSPE1P61604 102 aaKnown RBP8.81□□□□□ -1
TRAPPC4-211ENST00000533012 CFHR3Q02985 330 aa8.81□□□□□ -1
TRAPPC4-211ENST00000533012 DHRS2Q13268 280 aa8.81□□□□□ -1
TRAPPC4-211ENST00000533012 FOXE3Q13461 319 aa8.81□□□□□ -1
TRAPPC4-211ENST00000533012 ANKRD55Q3KP44 614 aa8.81□□□□□ -1
TRAPPC4-211ENST00000533012 CXorf66Q5JRM2 361 aaPredicted RBP8.81□□□□□ -1
TRAPPC4-211ENST00000533012 C10orf99Q6UWK7 81 aa8.81□□□□□ -1
TRAPPC4-211ENST00000533012 LYZL2Q7Z4W2 148 aa8.81□□□□□ -1
TRAPPC4-211ENST00000533012 C12orf45Q8N5I9 185 aaPredicted RBP8.81□□□□□ -1
TRAPPC4-211ENST00000533012 LRTM2Q8N967 370 aa8.81□□□□□ -1
TRAPPC4-211ENST00000533012 OR2T35Q8NGX2 323 aa8.81□□□□□ -1
TRAPPC4-211ENST00000533012 OR5B3Q8NH48 314 aa8.81□□□□□ -1
TRAPPC4-211ENST00000533012 GPR146Q96CH1 333 aa8.81□□□□□ -1
TRAPPC4-211ENST00000533012 CITED1Q99966 193 aa8.81□□□□□ -1
TRAPPC4-211ENST00000533012 SRSF8Q9BRL6 282 aaKnown RBP8.81□□□□□ -1
TRAPPC4-211ENST00000533012 SEC22CQ9BRL7 303 aa8.81□□□□□ -1
TRAPPC4-211ENST00000533012 QTRT1Q9BXR0 403 aaKnown RBP8.81□□□□□ -1
TRAPPC4-211ENST00000533012 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.81□□□□□ -1
TRAPPC4-211ENST00000533012 TMEM14BQ9NUH8 114 aa8.81□□□□□ -1
TRAPPC4-211ENST00000533012 COL6A5A8TX70 2615 aa8.81□□□□□ -1
TRAPPC4-211ENST00000533012 C15orf61A6NNL5 157 aa8.8□□□□□ -1
TRAPPC4-211ENST00000533012 ATP6V1G1O75348 118 aa8.8□□□□□ -1
TRAPPC4-211ENST00000533012 IFNA17P01571 189 aa8.8□□□□□ -1
TRAPPC4-211ENST00000533012 IGLV1-40P01703 118 aa8.8□□□□□ -1
TRAPPC4-211ENST00000533012 PF4V1P10720 104 aa8.8□□□□□ -1
TRAPPC4-211ENST00000533012 S100A1P23297 94 aa8.8□□□□□ -1
TRAPPC4-211ENST00000533012 CYCSP99999 105 aaKnown RBP8.8□□□□□ -1
TRAPPC4-211ENST00000533012 IZUMO4Q1ZYL8 232 aa8.8□□□□□ -1
TRAPPC4-211ENST00000533012 C19orf54Q5BKX5 351 aa8.8□□□□□ -1
TRAPPC4-211ENST00000533012 TCTEX1D4Q5JR98 221 aa8.8□□□□□ -1
TRAPPC4-211ENST00000533012 THOC7Q6I9Y2 204 aaKnown RBP8.8□□□□□ -1
TRAPPC4-211ENST00000533012 HSD17B13Q7Z5P4 300 aaPredicted RBP8.8□□□□□ -1
TRAPPC4-211ENST00000533012 ZNF429Q86V71 674 aa8.8□□□□□ -1
TRAPPC4-211ENST00000533012 TTC9CQ8N5M4 171 aa8.8□□□□□ -1
TRAPPC4-211ENST00000533012 CITED2Q99967 270 aaPredicted RBP8.8□□□□□ -1
TRAPPC4-211ENST00000533012 PDCD10Q9BUL8 212 aa8.8□□□□□ -1
TRAPPC4-211ENST00000533012 HINT2Q9BX68 163 aa8.8□□□□□ -1
TRAPPC4-211ENST00000533012 NDUFA4L2Q9NRX3 87 aa8.8□□□□□ -1
TRAPPC4-211ENST00000533012 ZNF355PQ9NSJ1 428 aa8.8□□□□□ -1
TRAPPC4-211ENST00000533012 ZFP57Q9NU63 452 aa8.8□□□□□ -1
TRAPPC4-211ENST00000533012 CACFD1Q9UGQ2 172 aa8.8□□□□□ -1
TRAPPC4-211ENST00000533012 ZNF257Q9Y2Q1 563 aa8.8□□□□□ -1
TRAPPC4-211ENST00000533012 TMED3Q9Y3Q3 217 aa8.8□□□□□ -1
TRAPPC4-211ENST00000533012 HSPB11Q9Y547 144 aa8.8□□□□□ -1
TRAPPC4-211ENST00000533012 A0A0G2JRQ6 117 aa8.79□□□□□ -1
TRAPPC4-211ENST00000533012 DBX1A6NMT0 343 aa8.79□□□□□ -1
TRAPPC4-211ENST00000533012 TEX22C9J3V5 150 aa8.79□□□□□ -1
TRAPPC4-211ENST00000533012 SOX15O60248 233 aa8.79□□□□□ -1
TRAPPC4-211ENST00000533012 HOXB5P09067 269 aa8.79□□□□□ -1
TRAPPC4-211ENST00000533012 PSMB8P28062 276 aa8.79□□□□□ -1
TRAPPC4-211ENST00000533012 RAB9AP51151 201 aa8.79□□□□□ -1
TRAPPC4-211ENST00000533012 KHDC1LQ5JSQ8 128 aa8.79□□□□□ -1
TRAPPC4-211ENST00000533012 ASPHD1Q5U4P2 390 aa8.79□□□□□ -1
TRAPPC4-211ENST00000533012 Q6ZRM9 215 aa8.79□□□□□ -1
TRAPPC4-211ENST00000533012 NDUFA11Q86Y39 141 aa8.79□□□□□ -1
TRAPPC4-211ENST00000533012 MRPL41Q8IXM3 137 aaKnown RBP8.79□□□□□ -1
TRAPPC4-211ENST00000533012 RNF152Q8N8N0 203 aa8.79□□□□□ -1
TRAPPC4-211ENST00000533012 OR52B4Q8NGK2 314 aa8.79□□□□□ -1
TRAPPC4-211ENST00000533012 FAM110DQ8TAY7 271 aaPredicted RBP8.79□□□□□ -1
TRAPPC4-211ENST00000533012 MITD1Q8WV92 249 aa8.79□□□□□ -1
TRAPPC4-211ENST00000533012 MS4A10Q96PG2 267 aa8.79□□□□□ -1
TRAPPC4-211ENST00000533012 COA4Q9NYJ1 87 aa8.79□□□□□ -1
TRAPPC4-211ENST00000533012 CACNG5Q9UF02 275 aa8.79□□□□□ -1
TRAPPC4-211ENST00000533012 TSSC4Q9Y5U2 329 aaPredicted RBP8.79□□□□□ -1
TRAPPC4-211ENST00000533012 A0A1B0GU03 582 aa8.78□□□□□ -1
TRAPPC4-211ENST00000533012 A0A1B0GW64 132 aa8.78□□□□□ -1
TRAPPC4-211ENST00000533012 CGB1A6NKQ9 187 aa8.78□□□□□ -1
TRAPPC4-211ENST00000533012 NPIPB5A8MRT5 1133 aa8.78□□□□□ -1
TRAPPC4-211ENST00000533012 HMSDA8MTL9 139 aa8.78□□□□□ -1
TRAPPC4-211ENST00000533012 H3BUA1 57 aa8.78□□□□□ -1
TRAPPC4-211ENST00000533012 GOSR2O14653 212 aa8.78□□□□□ -1
TRAPPC4-211ENST00000533012 ST8SIA3O43173 380 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms