RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	RPSA	P08865	295 aa	Known RBP	4.2	□□□□□ -1.74
PUM1-222	ENST00000531867	TBP	P20226	339 aa		4.2	□□□□□ -1.74
PUM1-222	ENST00000531867	MAS1L	P35410	378 aa		4.2	□□□□□ -1.74
PUM1-222	ENST00000531867	OPRL1	P41146	370 aa		4.2	□□□□□ -1.74
PUM1-222	ENST00000531867	GSS	P48637	474 aa		4.2	□□□□□ -1.74
PUM1-222	ENST00000531867	TPBG	Q13641	420 aa		4.2	□□□□□ -1.74
PUM1-222	ENST00000531867	CNPY1	Q3B7I2	92 aa		4.2	□□□□□ -1.74
PUM1-222	ENST00000531867	BSX	Q3C1V8	233 aa		4.2	□□□□□ -1.74
PUM1-222	ENST00000531867	TNFAIP8L3	Q5GJ75	292 aa		4.2	□□□□□ -1.74
PUM1-222	ENST00000531867	ACTL10	Q5JWF8	245 aa		4.2	□□□□□ -1.74
PUM1-222	ENST00000531867	ZNF57	Q68EA5	555 aa	Predicted RBP	4.2	□□□□□ -1.74
PUM1-222	ENST00000531867	FAM53A	Q6NSI3	398 aa	Predicted RBP	4.2	□□□□□ -1.74
PUM1-222	ENST00000531867	SMIM29	Q86T20	159 aa		4.2	□□□□□ -1.74
PUM1-222	ENST00000531867	TRPT1	Q86TN4	253 aa	Known RBP	4.2	□□□□□ -1.74
PUM1-222	ENST00000531867	LINC00471	Q8N535	108 aa		4.2	□□□□□ -1.74
PUM1-222	ENST00000531867	STPG4	Q8N801	248 aa		4.2	□□□□□ -1.74
PUM1-222	ENST00000531867	LFNG	Q8NES3	379 aa		4.2	□□□□□ -1.74
PUM1-222	ENST00000531867	LZIC	Q8WZA0	190 aa		4.2	□□□□□ -1.74
PUM1-222	ENST00000531867	ARPC1A	Q92747	370 aa		4.2	□□□□□ -1.74
PUM1-222	ENST00000531867	KCTD7	Q96MP8	289 aa		4.2	□□□□□ -1.74
PUM1-222	ENST00000531867	OR4C12	Q96R67	309 aa		4.2	□□□□□ -1.74
PUM1-222	ENST00000531867	RSG1	Q9BU20	258 aa		4.2	□□□□□ -1.74
PUM1-222	ENST00000531867	TOLLIP	Q9H0E2	274 aa		4.2	□□□□□ -1.74
PUM1-222	ENST00000531867	TMBIM4	Q9HC24	238 aa		4.2	□□□□□ -1.74
PUM1-222	ENST00000531867	IL1RAP	Q9NPH3	570 aa		4.2	□□□□□ -1.74
PUM1-222	ENST00000531867	PLEKHJ1	Q9NW61	149 aa		4.2	□□□□□ -1.74
PUM1-222	ENST00000531867	DNAH17	Q9UFH2	4485 aa		4.19	□□□□□ -1.74
PUM1-222	ENST00000531867	IGHV3OR16-12	A0A075B7B8	117 aa		4.19	□□□□□ -1.74
PUM1-222	ENST00000531867		A0A1B0GU03	582 aa		4.19	□□□□□ -1.74
PUM1-222	ENST00000531867	PQLC2L	A1A4F0	135 aa		4.19	□□□□□ -1.74
PUM1-222	ENST00000531867	ZNF593	O00488	134 aa	Predicted RBP	4.19	□□□□□ -1.74
PUM1-222	ENST00000531867	SERPINA1	P01009	418 aa		4.19	□□□□□ -1.74
PUM1-222	ENST00000531867	IGKV1D-33	P01593	117 aa		4.19	□□□□□ -1.74
PUM1-222	ENST00000531867	IGKV1-33	P01594	117 aa		4.19	□□□□□ -1.74
PUM1-222	ENST00000531867	IGLV3-1	P01715	115 aa		4.19	□□□□□ -1.74
PUM1-222	ENST00000531867	OR5H8	P0DN80	308 aa		4.19	□□□□□ -1.74
PUM1-222	ENST00000531867	VDAC1	P21796	283 aa		4.19	□□□□□ -1.74
PUM1-222	ENST00000531867	CDK2	P24941	298 aa		4.19	□□□□□ -1.74
PUM1-222	ENST00000531867	PYCR1	P32322	319 aa		4.19	□□□□□ -1.74
PUM1-222	ENST00000531867	SRPX	P78539	464 aa		4.19	□□□□□ -1.74
PUM1-222	ENST00000531867	UNC119	Q13432	240 aa		4.19	□□□□□ -1.74
PUM1-222	ENST00000531867	COX19	Q49B96	90 aa		4.19	□□□□□ -1.74
PUM1-222	ENST00000531867	AKIRIN2	Q53H80	203 aa		4.19	□□□□□ -1.74
PUM1-222	ENST00000531867	TMEM42	Q69YG0	159 aa		4.19	□□□□□ -1.74
PUM1-222	ENST00000531867	LHFPL3	Q86UP9	236 aa		4.19	□□□□□ -1.74
PUM1-222	ENST00000531867	MREG	Q8N565	214 aa		4.19	□□□□□ -1.74
PUM1-222	ENST00000531867	OR2T4	Q8NH00	348 aa		4.19	□□□□□ -1.74
PUM1-222	ENST00000531867	ENKUR	Q8TC29	256 aa		4.19	□□□□□ -1.74
PUM1-222	ENST00000531867	HSPB9	Q9BQS6	159 aa		4.19	□□□□□ -1.74
PUM1-222	ENST00000531867	NICN1	Q9BSH3	213 aa		4.19	□□□□□ -1.74
PUM1-222	ENST00000531867	CCDC28B	Q9BUN5	200 aa		4.19	□□□□□ -1.74
PUM1-222	ENST00000531867	TM2D1	Q9BX74	207 aa		4.19	□□□□□ -1.74
PUM1-222	ENST00000531867	ALX4	Q9H161	411 aa	Predicted RBP	4.19	□□□□□ -1.74
PUM1-222	ENST00000531867	OR52D1	Q9H346	318 aa		4.19	□□□□□ -1.74
PUM1-222	ENST00000531867	TUBA4B	Q9H853	241 aa		4.19	□□□□□ -1.74
PUM1-222	ENST00000531867	KCNIP1	Q9NZI2	227 aa		4.19	□□□□□ -1.74
PUM1-222	ENST00000531867	KLK5	Q9Y337	293 aa	Predicted RBP	4.19	□□□□□ -1.74
PUM1-222	ENST00000531867	SAMHD1	Q9Y3Z3	626 aa	Known RBP	4.19	□□□□□ -1.74
PUM1-222	ENST00000531867		A0A087WW49	117 aa		4.18	□□□□□ -1.74
PUM1-222	ENST00000531867		H0Y980	276 aa		4.18	□□□□□ -1.74
PUM1-222	ENST00000531867		K7EN84	100 aa		4.18	□□□□□ -1.74
PUM1-222	ENST00000531867	MPZL2	O60487	215 aa		4.18	□□□□□ -1.74
PUM1-222	ENST00000531867	NXPH4	O95158	308 aa		4.18	□□□□□ -1.74
PUM1-222	ENST00000531867	ORM1	P02763	201 aa		4.18	□□□□□ -1.74
PUM1-222	ENST00000531867	CGB3	P0DN86	165 aa		4.18	□□□□□ -1.74
PUM1-222	ENST00000531867	CGB7	P0DN87	165 aa		4.18	□□□□□ -1.74
PUM1-222	ENST00000531867	RAB4A	P20338	218 aa		4.18	□□□□□ -1.74
PUM1-222	ENST00000531867	HSD11B1	P28845	292 aa		4.18	□□□□□ -1.74
PUM1-222	ENST00000531867	FMO3	P31513	532 aa		4.18	□□□□□ -1.74
PUM1-222	ENST00000531867	RAB7A	P51149	207 aa		4.18	□□□□□ -1.74
PUM1-222	ENST00000531867	CYCS	P99999	105 aa	Known RBP	4.18	□□□□□ -1.74
PUM1-222	ENST00000531867	TNFRSF9	Q07011	255 aa		4.18	□□□□□ -1.74
PUM1-222	ENST00000531867	DIAPH2-AS1	Q14236	149 aa		4.18	□□□□□ -1.74
PUM1-222	ENST00000531867	HES1	Q14469	280 aa		4.18	□□□□□ -1.74
PUM1-222	ENST00000531867	EDDM3A	Q14507	147 aa		4.18	□□□□□ -1.74
PUM1-222	ENST00000531867	LCE1E	Q5T753	118 aa		4.18	□□□□□ -1.74
PUM1-222	ENST00000531867	LINC01590	Q5TEZ4	76 aa		4.18	□□□□□ -1.74
PUM1-222	ENST00000531867	UBE2U	Q5VVX9	321 aa		4.18	□□□□□ -1.74
PUM1-222	ENST00000531867	LPCAT4	Q643R3	524 aa		4.18	□□□□□ -1.74
PUM1-222	ENST00000531867	IL34	Q6ZMJ4	242 aa		4.18	□□□□□ -1.74
PUM1-222	ENST00000531867	MRPL52	Q86TS9	123 aa	Known RBP	4.18	□□□□□ -1.74
PUM1-222	ENST00000531867	OR8J3	Q8NGG0	315 aa		4.18	□□□□□ -1.74
PUM1-222	ENST00000531867	OR9G1	Q8NH87	305 aa		4.18	□□□□□ -1.74
PUM1-222	ENST00000531867	EEF1AKMT3	Q96AZ1	226 aa		4.18	□□□□□ -1.74
PUM1-222	ENST00000531867	RCN3	Q96D15	328 aa		4.18	□□□□□ -1.74
PUM1-222	ENST00000531867	AMELY	Q99218	206 aa		4.18	□□□□□ -1.74
PUM1-222	ENST00000531867	TSNAX	Q99598	290 aa	Known RBP	4.18	□□□□□ -1.74
PUM1-222	ENST00000531867	EBF4	Q9BQW3	602 aa		4.18	□□□□□ -1.74
PUM1-222	ENST00000531867	TMED9	Q9BVK6	235 aa		4.18	□□□□□ -1.74
PUM1-222	ENST00000531867	SDF2L1	Q9HCN8	221 aa		4.18	□□□□□ -1.74
PUM1-222	ENST00000531867	FKBP14	Q9NWM8	211 aa		4.18	□□□□□ -1.74
PUM1-222	ENST00000531867	SLC7A11	Q9UPY5	501 aa		4.18	□□□□□ -1.74
PUM1-222	ENST00000531867	PKD1	P98161	4303 aa		4.17	□□□□□ -1.74
PUM1-222	ENST00000531867		M0R036	132 aa		4.17	□□□□□ -1.74
PUM1-222	ENST00000531867	FXYD1	O00168	92 aa		4.17	□□□□□ -1.74
PUM1-222	ENST00000531867	EIF3G	O75821	320 aa	Known RBP eCLIP	4.17	□□□□□ -1.74
PUM1-222	ENST00000531867	ZNF682	O95780	498 aa		4.17	□□□□□ -1.74
PUM1-222	ENST00000531867	HSPB1	P04792	205 aa	Known RBP	4.17	□□□□□ -1.74
PUM1-222	ENST00000531867	LGALS1	P09382	135 aa	Known RBP	4.17	□□□□□ -1.74
PUM1-222	ENST00000531867	CTXN2	P0C2S0	81 aa		4.17	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms