RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 SLC25A17O43808 307 aa13.15□□□□□ -0.3
PKP3-208ENST00000531857 DIRAS3O95661 229 aa13.15□□□□□ -0.3
PKP3-208ENST00000531857 CSN3P07498 182 aa13.15□□□□□ -0.3
PKP3-208ENST00000531857 FCGR3AP08637 254 aa13.15□□□□□ -0.3
PKP3-208ENST00000531857 CEACAM6P40199 344 aa13.15□□□□□ -0.3
PKP3-208ENST00000531857 UCP3P55916 312 aa13.15□□□□□ -0.3
PKP3-208ENST00000531857 RPS16P62249 146 aaKnown RBP13.15□□□□□ -0.3
PKP3-208ENST00000531857 PJVKQ0ZLH3 352 aa13.15□□□□□ -0.3
PKP3-208ENST00000531857 MOB1BQ7L9L4 216 aa13.15□□□□□ -0.3
PKP3-208ENST00000531857 GTSCR1Q86UQ5 136 aa13.15□□□□□ -0.3
PKP3-208ENST00000531857 MITD1Q8WV92 249 aa13.15□□□□□ -0.3
PKP3-208ENST00000531857 TSNAXQ99598 290 aaKnown RBP13.15□□□□□ -0.3
PKP3-208ENST00000531857 HIPK2Q9H2X6 1198 aa13.15□□□□□ -0.3
PKP3-208ENST00000531857 A0A0G2JLM5 398 aa13.14□□□□□ -0.31
PKP3-208ENST00000531857 H3BUA1 57 aa13.14□□□□□ -0.31
PKP3-208ENST00000531857 SLC22A5O76082 557 aa13.14□□□□□ -0.31
PKP3-208ENST00000531857 SPDEFO95238 335 aa13.14□□□□□ -0.31
PKP3-208ENST00000531857 ZBTB25P24278 435 aa13.14□□□□□ -0.31
PKP3-208ENST00000531857 DHRS2Q13268 280 aa13.14□□□□□ -0.31
PKP3-208ENST00000531857 LINC00322Q6ZN03 302 aaPredicted RBP13.14□□□□□ -0.31
PKP3-208ENST00000531857 TMED4Q7Z7H5 227 aa13.14□□□□□ -0.31
PKP3-208ENST00000531857 OR2T35Q8NGX2 323 aa13.14□□□□□ -0.31
PKP3-208ENST00000531857 COQ8AQ8NI60 647 aa13.14□□□□□ -0.31
PKP3-208ENST00000531857 HDHD3Q9BSH5 251 aaPredicted RBP13.14□□□□□ -0.31
PKP3-208ENST00000531857 PLEKHA3Q9HB20 300 aa13.14□□□□□ -0.31
PKP3-208ENST00000531857 C9orf170A2RU37 121 aa13.13□□□□□ -0.31
PKP3-208ENST00000531857 HMSDA8MTL9 139 aa13.13□□□□□ -0.31
PKP3-208ENST00000531857 CNIH1O95406 144 aa13.13□□□□□ -0.31
PKP3-208ENST00000531857 HLA-AP01891 365 aaKnown RBP13.13□□□□□ -0.31
PKP3-208ENST00000531857 CTSDP07339 412 aaPredicted RBP13.13□□□□□ -0.31
PKP3-208ENST00000531857 CXCL3P19876 107 aa13.13□□□□□ -0.31
PKP3-208ENST00000531857 LCN12Q6JVE5 192 aa13.13□□□□□ -0.31
PKP3-208ENST00000531857 ZNF343Q6P1L6 599 aa13.13□□□□□ -0.31
PKP3-208ENST00000531857 PEF1Q9UBV8 284 aaKnown RBP13.13□□□□□ -0.31
PKP3-208ENST00000531857 RBMXL2O75526 392 aaKnown RBP13.12□□□□□ -0.31
PKP3-208ENST00000531857 IGLV2-23P01705 113 aa13.12□□□□□ -0.31
PKP3-208ENST00000531857 SCTP09683 121 aa13.12□□□□□ -0.31
PKP3-208ENST00000531857 PDPNQ86YL7 162 aa13.12□□□□□ -0.31
PKP3-208ENST00000531857 EDARADDQ8WWZ3 215 aa13.12□□□□□ -0.31
PKP3-208ENST00000531857 KRTAP17-1Q9BYP8 105 aa13.12□□□□□ -0.31
PKP3-208ENST00000531857 SIGLEC8Q9NYZ4 499 aa13.12□□□□□ -0.31
PKP3-208ENST00000531857 KCNIP3Q9Y2W7 256 aa13.12□□□□□ -0.31
PKP3-208ENST00000531857 SFT2D2O95562 160 aa13.11□□□□□ -0.31
PKP3-208ENST00000531857 CRYGBP07316 175 aa13.11□□□□□ -0.31
PKP3-208ENST00000531857 HLA-DRB3P79483 266 aa13.11□□□□□ -0.31
PKP3-208ENST00000531857 ZNF767PQ75MW2 155 aa13.11□□□□□ -0.31
PKP3-208ENST00000531857 CCDC71LQ8N9Z2 235 aa13.11□□□□□ -0.31
PKP3-208ENST00000531857 BVESQ8NE79 360 aa13.11□□□□□ -0.31
PKP3-208ENST00000531857 IL17DQ8TAD2 202 aa13.11□□□□□ -0.31
PKP3-208ENST00000531857 MARCH1Q8TCQ1 289 aa13.11□□□□□ -0.31
PKP3-208ENST00000531857 COMMD9Q9P000 198 aa13.11□□□□□ -0.31
PKP3-208ENST00000531857 IGKV1-6A0A0C4DH72 117 aa13.1□□□□□ -0.31
PKP3-208ENST00000531857 BRI3O95415 125 aa13.1□□□□□ -0.31
PKP3-208ENST00000531857 APOA2P02652 100 aa13.1□□□□□ -0.31
PKP3-208ENST00000531857 APELAP0DMC3 54 aa13.1□□□□□ -0.31
PKP3-208ENST00000531857 PGAM2P15259 253 aa13.1□□□□□ -0.31
PKP3-208ENST00000531857 AADACP22760 399 aa13.1□□□□□ -0.31
PKP3-208ENST00000531857 NKX2-5P52952 324 aaPredicted RBP13.1□□□□□ -0.31
PKP3-208ENST00000531857 CD81P60033 236 aa13.1□□□□□ -0.31
PKP3-208ENST00000531857 RPEL1Q2QD12 228 aa13.1□□□□□ -0.31
PKP3-208ENST00000531857 AADACL3Q5VUY0 350 aa13.1□□□□□ -0.31
PKP3-208ENST00000531857 SLC38A6Q8IZM9 456 aa13.1□□□□□ -0.31
PKP3-208ENST00000531857 UXS1Q8NBZ7 420 aa13.1□□□□□ -0.31
PKP3-208ENST00000531857 ZNF2Q9BSG1 426 aaPredicted RBP13.1□□□□□ -0.31
PKP3-208ENST00000531857 Q9N2K0 584 aa13.1□□□□□ -0.31
PKP3-208ENST00000531857 SLC35D1Q9NTN3 355 aa13.1□□□□□ -0.31
PKP3-208ENST00000531857 COA4Q9NYJ1 87 aa13.1□□□□□ -0.31
PKP3-208ENST00000531857 PLECQ15149 4684 aaKnown RBP13.09□□□□□ -0.31
PKP3-208ENST00000531857 ALMS1Q8TCU4 4167 aa13.09□□□□□ -0.31
PKP3-208ENST00000531857 RBMY1BA6NDE4 496 aaKnown RBP13.09□□□□□ -0.31
PKP3-208ENST00000531857 RBMY1EA6NEQ0 496 aaKnown RBP13.09□□□□□ -0.31
PKP3-208ENST00000531857 TRDCB7Z8K6 153 aa13.09□□□□□ -0.31
PKP3-208ENST00000531857 M0R1X1 148 aa13.09□□□□□ -0.31
PKP3-208ENST00000531857 GOSR2O14653 212 aa13.09□□□□□ -0.31
PKP3-208ENST00000531857 B3GALNT1O75752 331 aa13.09□□□□□ -0.31
PKP3-208ENST00000531857 RBMY1DP0C7P1 496 aaKnown RBP13.09□□□□□ -0.31
PKP3-208ENST00000531857 S100GP29377 79 aa13.09□□□□□ -0.31
PKP3-208ENST00000531857 HERV-K104P61576 105 aa13.09□□□□□ -0.31
PKP3-208ENST00000531857 PPP1R1AQ13522 171 aa13.09□□□□□ -0.31
PKP3-208ENST00000531857 MRGPRG-AS1Q2M3A8 158 aa13.09□□□□□ -0.31
PKP3-208ENST00000531857 C9orf62Q8N4C0 152 aa13.09□□□□□ -0.31
PKP3-208ENST00000531857 OR4A4PQ8NGN8 299 aa13.09□□□□□ -0.31
PKP3-208ENST00000531857 MRGPRFQ96AM1 343 aa13.09□□□□□ -0.31
PKP3-208ENST00000531857 WFDC10AQ9H1F0 79 aa13.09□□□□□ -0.31
PKP3-208ENST00000531857 C5orf66Q9H5L9 145 aa13.09□□□□□ -0.31
PKP3-208ENST00000531857 ZNF230Q9UIE0 474 aaPredicted RBP13.09□□□□□ -0.31
PKP3-208ENST00000531857 HSPB11Q9Y547 144 aa13.09□□□□□ -0.31
PKP3-208ENST00000531857 ZNF785A8K8V0 405 aa13.08□□□□□ -0.32
PKP3-208ENST00000531857 CD7P09564 240 aa13.08□□□□□ -0.32
PKP3-208ENST00000531857 AKR1C4P17516 323 aa13.08□□□□□ -0.32
PKP3-208ENST00000531857 NFYAP23511 347 aaPredicted RBP13.08□□□□□ -0.32
PKP3-208ENST00000531857 VAMP1P23763 118 aa13.08□□□□□ -0.32
PKP3-208ENST00000531857 LGALS7P47929 136 aa13.08□□□□□ -0.32
PKP3-208ENST00000531857 SRPXP78539 464 aa13.08□□□□□ -0.32
PKP3-208ENST00000531857 CD300EQ496F6 205 aaPredicted RBP13.08□□□□□ -0.32
PKP3-208ENST00000531857 GSG1LQ6UXU4 331 aa13.08□□□□□ -0.32
PKP3-208ENST00000531857 DEFB125Q8N687 156 aa13.08□□□□□ -0.32
PKP3-208ENST00000531857 OR52B4Q8NGK2 314 aa13.08□□□□□ -0.32
PKP3-208ENST00000531857 MOB3AQ96BX8 217 aa13.08□□□□□ -0.32
PKP3-208ENST00000531857 USMG5Q96IX5 58 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms