RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 MEIS3P1A6NDR6 274 aa11.77□□□□□ -0.53
CHMP4A-204ENST00000530996 OR4C46A6NHA9 309 aa11.77□□□□□ -0.53
CHMP4A-204ENST00000530996 RPL35AP18077 110 aaKnown RBP11.77□□□□□ -0.53
CHMP4A-204ENST00000530996 SDC2P34741 201 aa11.77□□□□□ -0.53
CHMP4A-204ENST00000530996 KLK9Q2XQG4 91 aa11.77□□□□□ -0.53
CHMP4A-204ENST00000530996 THOC7Q6I9Y2 204 aaKnown RBP11.77□□□□□ -0.53
CHMP4A-204ENST00000530996 SLC25A24Q6NUK1 477 aa11.77□□□□□ -0.53
CHMP4A-204ENST00000530996 ZNF818PQ6ZRF7 136 aa11.77□□□□□ -0.53
CHMP4A-204ENST00000530996 STPG3Q8N7X2 389 aa11.77□□□□□ -0.53
CHMP4A-204ENST00000530996 CD300LFQ8TDQ1 290 aa11.77□□□□□ -0.53
CHMP4A-204ENST00000530996 SLC25A38Q96DW6 304 aa11.77□□□□□ -0.53
CHMP4A-204ENST00000530996 BSCL2Q96G97 398 aaPredicted RBP11.77□□□□□ -0.53
CHMP4A-204ENST00000530996 SRSF8Q9BRL6 282 aaKnown RBP11.77□□□□□ -0.53
CHMP4A-204ENST00000530996 ZNF436Q9C0F3 470 aaPredicted RBP11.77□□□□□ -0.53
CHMP4A-204ENST00000530996 C5orf66Q9H5L9 145 aa11.77□□□□□ -0.53
CHMP4A-204ENST00000530996 COMMD9Q9P000 198 aa11.77□□□□□ -0.53
CHMP4A-204ENST00000530996 KLK9Q9UKQ9 250 aa11.77□□□□□ -0.53
CHMP4A-204ENST00000530996 TP53TG1Q9Y2A0 90 aa11.77□□□□□ -0.53
CHMP4A-204ENST00000530996 KLK5Q9Y337 293 aaPredicted RBP11.77□□□□□ -0.53
CHMP4A-204ENST00000530996 ETV7Q9Y603 341 aa11.77□□□□□ -0.53
CHMP4A-204ENST00000530996 TSPAN4O14817 238 aa11.76□□□□□ -0.53
CHMP4A-204ENST00000530996 ZNF207O43670 478 aaKnown RBP11.76□□□□□ -0.53
CHMP4A-204ENST00000530996 RLN1P04808 185 aa11.76□□□□□ -0.53
CHMP4A-204ENST00000530996 CLEC2LP0C7M8 214 aa11.76□□□□□ -0.53
CHMP4A-204ENST00000530996 TRAPPC2P0DI81 140 aa11.76□□□□□ -0.53
CHMP4A-204ENST00000530996 TRAPPC2BP0DI82 140 aa11.76□□□□□ -0.53
CHMP4A-204ENST00000530996 C8orf88P0DMB2 117 aa11.76□□□□□ -0.53
CHMP4A-204ENST00000530996 EWSR1Q01844 656 aaKnown RBP eCLIP11.76□□□□□ -0.53
CHMP4A-204ENST00000530996 TNFRSF9Q07011 255 aa11.76□□□□□ -0.53
CHMP4A-204ENST00000530996 Q56UQ5 140 aa11.76□□□□□ -0.53
CHMP4A-204ENST00000530996 CEMP1Q6PRD7 247 aaPredicted RBP11.76□□□□□ -0.53
CHMP4A-204ENST00000530996 Q6ZWC4 215 aa11.76□□□□□ -0.53
CHMP4A-204ENST00000530996 TMEM217Q8N7C4 229 aa11.76□□□□□ -0.53
CHMP4A-204ENST00000530996 TSPAN14Q8NG11 270 aa11.76□□□□□ -0.53
CHMP4A-204ENST00000530996 OR5H6Q8NGV6 325 aa11.76□□□□□ -0.53
CHMP4A-204ENST00000530996 VN1R17PQ8TDU5 208 aa11.76□□□□□ -0.53
CHMP4A-204ENST00000530996 PLEKHA2Q9HB19 425 aa11.76□□□□□ -0.53
CHMP4A-204ENST00000530996 DIABLOQ9NR28 239 aa11.76□□□□□ -0.53
CHMP4A-204ENST00000530996 EHFQ9NZC4 300 aa11.76□□□□□ -0.53
CHMP4A-204ENST00000530996 RAB26Q9ULW5 256 aa11.76□□□□□ -0.53
CHMP4A-204ENST00000530996 MARCH11A6NNE9 402 aa11.75□□□□□ -0.53
CHMP4A-204ENST00000530996 UBE2CO00762 179 aa11.75□□□□□ -0.53
CHMP4A-204ENST00000530996 MRPS14O60783 128 aaKnown RBP11.75□□□□□ -0.53
CHMP4A-204ENST00000530996 CBX5P45973 191 aa11.75□□□□□ -0.53
CHMP4A-204ENST00000530996 POU2AF1Q16633 256 aa11.75□□□□□ -0.53
CHMP4A-204ENST00000530996 ODF3L2Q3SX64 289 aa11.75□□□□□ -0.53
CHMP4A-204ENST00000530996 HSD17B13Q7Z5P4 300 aaPredicted RBP11.75□□□□□ -0.53
CHMP4A-204ENST00000530996 SPARTQ8N0X7 666 aa11.75□□□□□ -0.53
CHMP4A-204ENST00000530996 OR1L8Q8NGR8 309 aa11.75□□□□□ -0.53
CHMP4A-204ENST00000530996 OR5B3Q8NH48 314 aa11.75□□□□□ -0.53
CHMP4A-204ENST00000530996 BORCS5Q969J3 196 aa11.75□□□□□ -0.53
CHMP4A-204ENST00000530996 LSM10Q969L4 123 aaKnown RBP11.75□□□□□ -0.53
CHMP4A-204ENST00000530996 C6orf62Q9GZU0 229 aaPredicted RBP11.75□□□□□ -0.53
CHMP4A-204ENST00000530996 C21orf62Q9NYP8 219 aa11.75□□□□□ -0.53
CHMP4A-204ENST00000530996 NDUFA4O00483 81 aa11.74□□□□□ -0.53
CHMP4A-204ENST00000530996 SCAND1P57086 179 aa11.74□□□□□ -0.53
CHMP4A-204ENST00000530996 WT1-ASQ06250 92 aa11.74□□□□□ -0.53
CHMP4A-204ENST00000530996 SPSB3Q6PJ21 355 aa11.74□□□□□ -0.53
CHMP4A-204ENST00000530996 WFDC3Q8IUB2 231 aa11.74□□□□□ -0.53
CHMP4A-204ENST00000530996 OR5AP2Q8NGF4 316 aa11.74□□□□□ -0.53
CHMP4A-204ENST00000530996 RNF167Q9H6Y7 350 aa11.74□□□□□ -0.53
CHMP4A-204ENST00000530996 AUNIPQ9H7T9 357 aa11.74□□□□□ -0.53
CHMP4A-204ENST00000530996 NSG2Q9Y328 171 aa11.74□□□□□ -0.53
CHMP4A-204ENST00000530996 PLECQ15149 4684 aaKnown RBP11.74□□□□□ -0.53
CHMP4A-204ENST00000530996 A0A0A6YYH2 397 aa11.73□□□□□ -0.53
CHMP4A-204ENST00000530996 KIR2DL5BA0A0G2JN68 375 aa11.73□□□□□ -0.53
CHMP4A-204ENST00000530996 KIR2DL5BA0A0G2JPC4 375 aa11.73□□□□□ -0.53
CHMP4A-204ENST00000530996 A6NJ64 397 aa11.73□□□□□ -0.53
CHMP4A-204ENST00000530996 SNAPC5O75971 98 aa11.73□□□□□ -0.53
CHMP4A-204ENST00000530996 SERPINE2P07093 398 aa11.73□□□□□ -0.53
CHMP4A-204ENST00000530996 CTSDP07339 412 aaPredicted RBP11.73□□□□□ -0.53
CHMP4A-204ENST00000530996 TFPI2P48307 235 aa11.73□□□□□ -0.53
CHMP4A-204ENST00000530996 ZNF773Q6PK81 442 aa11.73□□□□□ -0.53
CHMP4A-204ENST00000530996 KIR2DL5AQ8N109 375 aa11.73□□□□□ -0.53
CHMP4A-204ENST00000530996 KIR2DL5BQ8NHK3 375 aa11.73□□□□□ -0.53
CHMP4A-204ENST00000530996 CHRDL1Q9BU40 450 aa11.73□□□□□ -0.53
CHMP4A-204ENST00000530996 Q9H521 79 aa11.73□□□□□ -0.53
CHMP4A-204ENST00000530996 OR51B2Q9Y5P1 312 aa11.73□□□□□ -0.53
CHMP4A-204ENST00000530996 F11RQ9Y624 299 aaKnown RBP11.73□□□□□ -0.53
CHMP4A-204ENST00000530996 TEX50A0A1B0GTY4 177 aa11.72□□□□□ -0.53
CHMP4A-204ENST00000530996 YIF1AO95070 293 aa11.72□□□□□ -0.53
CHMP4A-204ENST00000530996 KRASP01116 189 aa11.72□□□□□ -0.53
CHMP4A-204ENST00000530996 FGF2P09038 288 aa11.72□□□□□ -0.53
CHMP4A-204ENST00000530996 G6PCP35575 357 aa11.72□□□□□ -0.53
CHMP4A-204ENST00000530996 GIMAP1Q8WWP7 306 aa11.72□□□□□ -0.53
CHMP4A-204ENST00000530996 RNF183Q96D59 192 aa11.72□□□□□ -0.53
CHMP4A-204ENST00000530996 GALNT14Q96FL9 552 aa11.72□□□□□ -0.53
CHMP4A-204ENST00000530996 ZNF2Q9BSG1 426 aaPredicted RBP11.72□□□□□ -0.53
CHMP4A-204ENST00000530996 IGKV3-7A0A075B6H7 116 aa11.71□□□□□ -0.53
CHMP4A-204ENST00000530996 F2RP25116 425 aa11.71□□□□□ -0.53
CHMP4A-204ENST00000530996 FCGR2BP31994 310 aaPredicted RBP11.71□□□□□ -0.53
CHMP4A-204ENST00000530996 LPAR6P43657 344 aa11.71□□□□□ -0.53
CHMP4A-204ENST00000530996 RELQ04864 619 aaPredicted RBP11.71□□□□□ -0.53
CHMP4A-204ENST00000530996 APRG1Q8IVJ8 170 aa11.71□□□□□ -0.53
CHMP4A-204ENST00000530996 CMTM1Q8IZ96 169 aa11.71□□□□□ -0.53
CHMP4A-204ENST00000530996 OR5H2Q8NGV7 314 aa11.71□□□□□ -0.53
CHMP4A-204ENST00000530996 SCARB1Q8WTV0 552 aa11.71□□□□□ -0.53
CHMP4A-204ENST00000530996 MISP3Q96FF7 219 aa11.71□□□□□ -0.53
CHMP4A-204ENST00000530996 TMEM56Q96MV1 263 aa11.71□□□□□ -0.53
CHMP4A-204ENST00000530996 IGHV3-49A0A0A0MS15 119 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms