RNA–Protein interactions for RNA: ENST00000530983.5

VPS28-213, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,337 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-213ENST00000530983 M0R1B8 84 aa15.82■□□□□ 0.12
VPS28-213ENST00000530983 SPRY3O43610 288 aa15.82■□□□□ 0.12
VPS28-213ENST00000530983 CA2P00918 260 aa15.82■□□□□ 0.12
VPS28-213ENST00000530983 SFTPCP11686 197 aa15.82■□□□□ 0.12
VPS28-213ENST00000530983 HSPE1P61604 102 aaKnown RBP15.82■□□□□ 0.12
VPS28-213ENST00000530983 TCF23Q7RTU1 214 aa15.82■□□□□ 0.12
VPS28-213ENST00000530983 RAI1Q7Z5J4 1906 aaPredicted RBP15.81■□□□□ 0.12
VPS28-213ENST00000530983 FOXH1O75593 365 aa15.81■□□□□ 0.12
VPS28-213ENST00000530983 MYOD1P15172 320 aa15.81■□□□□ 0.12
VPS28-213ENST00000530983 RPL29P47914 159 aaKnown RBP15.81■□□□□ 0.12
VPS28-213ENST00000530983 KLF3P57682 345 aaPredicted RBP15.81■□□□□ 0.12
VPS28-213ENST00000530983 RHOBP62745 196 aa15.81■□□□□ 0.12
VPS28-213ENST00000530983 RPL31P62899 125 aaKnown RBP15.81■□□□□ 0.12
VPS28-213ENST00000530983 ASCL3Q9NQ33 180 aa15.81■□□□□ 0.12
VPS28-213ENST00000530983 IDI2-AS1Q9NZ38 188 aa15.81■□□□□ 0.12
VPS28-213ENST00000530983 KBTBD11-OT1A0A1B0GTJ5 212 aa15.8■□□□□ 0.12
VPS28-213ENST00000530983 K7EN84 100 aa15.8■□□□□ 0.12
VPS28-213ENST00000530983 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.8■□□□□ 0.12
VPS28-213ENST00000530983 TMEM208Q9BTX3 173 aa15.8■□□□□ 0.12
VPS28-213ENST00000530983 NCOR1P1Q9H4R4 102 aa15.8■□□□□ 0.12
VPS28-213ENST00000530983 CHODLQ9H9P2 273 aa15.8■□□□□ 0.12
VPS28-213ENST00000530983 MBD3L4A6NDZ8 208 aaPredicted RBP15.8■□□□□ 0.12
VPS28-213ENST00000530983 MBD3L3A6NE82 208 aaPredicted RBP15.8■□□□□ 0.12
VPS28-213ENST00000530983 MBD3L5A6NJ08 208 aaPredicted RBP15.8■□□□□ 0.12
VPS28-213ENST00000530983 OR10J1P30954 320 aa15.8■□□□□ 0.12
VPS28-213ENST00000530983 THBS3P49746 956 aa15.8■□□□□ 0.12
VPS28-213ENST00000530983 VHLLQ6RSH7 139 aa15.8■□□□□ 0.12
VPS28-213ENST00000530983 OR10G8Q8NGN5 311 aa15.8■□□□□ 0.12
VPS28-213ENST00000530983 MBD3L2Q8NHZ7 208 aaPredicted RBP15.8■□□□□ 0.12
VPS28-213ENST00000530983 A6NNC1 897 aa15.79■□□□□ 0.12
VPS28-213ENST00000530983 IGFBP2P18065 325 aa15.79■□□□□ 0.12
VPS28-213ENST00000530983 YPEL3P61236 119 aaPredicted RBP15.79■□□□□ 0.12
VPS28-213ENST00000530983 PRR20EP86478 221 aa15.79■□□□□ 0.12
VPS28-213ENST00000530983 PRR20CP86479 221 aa15.79■□□□□ 0.12
VPS28-213ENST00000530983 PRR20DP86480 221 aa15.79■□□□□ 0.12
VPS28-213ENST00000530983 PRR20BP86481 221 aa15.79■□□□□ 0.12
VPS28-213ENST00000530983 PRR20AP86496 221 aa15.79■□□□□ 0.12
VPS28-213ENST00000530983 LYG1Q8N1E2 194 aa15.79■□□□□ 0.12
VPS28-213ENST00000530983 MS4A10Q96PG2 267 aa15.79■□□□□ 0.12
VPS28-213ENST00000530983 ADMP35318 185 aa15.79■□□□□ 0.12
VPS28-213ENST00000530983 GLRXP35754 106 aa15.79■□□□□ 0.12
VPS28-213ENST00000530983 HLA-DRB5Q30154 266 aa15.79■□□□□ 0.12
VPS28-213ENST00000530983 ZNF474Q6S9Z5 364 aaPredicted RBP15.79■□□□□ 0.12
VPS28-213ENST00000530983 ZNF439Q8NDP4 499 aa15.79■□□□□ 0.12
VPS28-213ENST00000530983 FAM222BQ8WU58 562 aa15.79■□□□□ 0.12
VPS28-213ENST00000530983 NEUROG1Q92886 237 aa15.79■□□□□ 0.12
VPS28-213ENST00000530983 C11orf52Q96A22 123 aa15.79■□□□□ 0.12
VPS28-213ENST00000530983 TBX15Q96SF7 602 aa15.79■□□□□ 0.12
VPS28-213ENST00000530983 ZNF705FA8MVS1 300 aaPredicted RBP15.78■□□□□ 0.12
VPS28-213ENST00000530983 DLEU1O43261 78 aa15.78■□□□□ 0.12
VPS28-213ENST00000530983 ZNF705DP0CH99 300 aaPredicted RBP15.78■□□□□ 0.12
VPS28-213ENST00000530983 ZNF705BP0CI00 300 aaPredicted RBP15.78■□□□□ 0.12
VPS28-213ENST00000530983 MRPS11P82912 194 aaKnown RBP15.78■□□□□ 0.12
VPS28-213ENST00000530983 ZNF705AQ6ZN79 300 aaPredicted RBP15.78■□□□□ 0.12
VPS28-213ENST00000530983 OR4P4Q8NGL7 312 aa15.78■□□□□ 0.12
VPS28-213ENST00000530983 ENY2Q9NPA8 101 aa15.78■□□□□ 0.12
VPS28-213ENST00000530983 ICE1Q9Y2F5 2266 aa15.78■□□□□ 0.12
VPS28-213ENST00000530983 TNCP24821 2201 aa15.78■□□□□ 0.12
VPS28-213ENST00000530983 IGLV3-9A0A075B6K5 115 aa15.78■□□□□ 0.12
VPS28-213ENST00000530983 CD33P20138 364 aa15.78■□□□□ 0.12
VPS28-213ENST00000530983 RAB31Q13636 194 aa15.78■□□□□ 0.12
VPS28-213ENST00000530983 TIMM23BQ5SRD1 257 aa15.78■□□□□ 0.12
VPS28-213ENST00000530983 ZCCHC14Q8WYQ9 949 aaKnown RBP15.78■□□□□ 0.12
VPS28-213ENST00000530983 NPSP0C0P6 89 aa15.77■□□□□ 0.12
VPS28-213ENST00000530983 FTH1P19P0C7X4 201 aa15.77■□□□□ 0.12
VPS28-213ENST00000530983 LINC00869P0C866 280 aa15.77■□□□□ 0.12
VPS28-213ENST00000530983 POU2AF1Q16633 256 aa15.77■□□□□ 0.12
VPS28-213ENST00000530983 HINT2Q9BX68 163 aa15.77■□□□□ 0.12
VPS28-213ENST00000530983 GOLT1BQ9Y3E0 138 aa15.77■□□□□ 0.12
VPS28-213ENST00000530983 OR51B2Q9Y5P1 312 aa15.77■□□□□ 0.12
VPS28-213ENST00000530983 TRGV10A0A0A0MS01 117 aa15.77■□□□□ 0.11
VPS28-213ENST00000530983 SLC17A3O00476 420 aa15.77■□□□□ 0.11
VPS28-213ENST00000530983 RPLP1P05386 114 aaKnown RBP15.77■□□□□ 0.11
VPS28-213ENST00000530983 GATA4P43694 442 aa15.77■□□□□ 0.11
VPS28-213ENST00000530983 DEFB109BQ30KR1 87 aa15.77■□□□□ 0.11
VPS28-213ENST00000530983 MIR17HGQ75NE6 70 aa15.77■□□□□ 0.11
VPS28-213ENST00000530983 FAM122AQ96E09 287 aa15.77■□□□□ 0.11
VPS28-213ENST00000530983 RAB9BQ9NP90 201 aa15.77■□□□□ 0.11
VPS28-213ENST00000530983 YLPM1P49750 1951 aaKnown RBP15.76■□□□□ 0.11
VPS28-213ENST00000530983 C9JCJ5 164 aa15.76■□□□□ 0.11
VPS28-213ENST00000530983 MT-CO2P00403 227 aa15.76■□□□□ 0.11
VPS28-213ENST00000530983 GNG10P50151 68 aa15.76■□□□□ 0.11
VPS28-213ENST00000530983 TDRG1Q3Y452 100 aa15.76■□□□□ 0.11
VPS28-213ENST00000530983 STUMQ69YW2 141 aa15.76■□□□□ 0.11
VPS28-213ENST00000530983 RPRMLQ8N4K4 120 aa15.76■□□□□ 0.11
VPS28-213ENST00000530983 DEFB124Q8NES8 71 aa15.76■□□□□ 0.11
VPS28-213ENST00000530983 ADTRPQ96IZ2 230 aa15.76■□□□□ 0.11
VPS28-213ENST00000530983 GCM1Q9NP62 436 aa15.76■□□□□ 0.11
VPS28-213ENST00000530983 IL36BQ9NZH7 164 aa15.76■□□□□ 0.11
VPS28-213ENST00000530983 SPAARA0A1B0GVQ0 90 aa15.76■□□□□ 0.11
VPS28-213ENST00000530983 M0QZK8 103 aa15.76■□□□□ 0.11
VPS28-213ENST00000530983 IRF2P14316 349 aa15.76■□□□□ 0.11
VPS28-213ENST00000530983 ZNF90Q03938 601 aa15.76■□□□□ 0.11
VPS28-213ENST00000530983 PLCE1Q9P212 2302 aa15.76■□□□□ 0.11
VPS28-213ENST00000530983 GRIFINA4D1Z8 144 aa15.75■□□□□ 0.11
VPS28-213ENST00000530983 FNDC10F2Z333 226 aa15.75■□□□□ 0.11
VPS28-213ENST00000530983 MMP23AO75900 390 aa15.75■□□□□ 0.11
VPS28-213ENST00000530983 ACTL6BO94805 426 aa15.75■□□□□ 0.11
VPS28-213ENST00000530983 CBLN1P23435 193 aa15.75■□□□□ 0.11
VPS28-213ENST00000530983 MOB3BQ86TA1 216 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms