RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 TTC9CQ8N5M4 171 aa14.41□□□□□ -0.1
GMDS-208ENST00000530927 ZFAND1Q8TCF1 268 aa14.41□□□□□ -0.1
GMDS-208ENST00000530927 MARCH1Q8TCQ1 289 aa14.41□□□□□ -0.1
GMDS-208ENST00000530927 CD300LFQ8TDQ1 290 aa14.41□□□□□ -0.1
GMDS-208ENST00000530927 COMMD9Q9P000 198 aa14.41□□□□□ -0.1
GMDS-208ENST00000530927 HSPB1P04792 205 aaKnown RBP14.41□□□□□ -0.1
GMDS-208ENST00000530927 MAS1LP35410 378 aa14.41□□□□□ -0.1
GMDS-208ENST00000530927 CCR6P51684 374 aa14.41□□□□□ -0.1
GMDS-208ENST00000530927 OR2B8PP59922 312 aa14.41□□□□□ -0.1
GMDS-208ENST00000530927 EGFEM1PQ0D2K5 195 aa14.41□□□□□ -0.1
GMDS-208ENST00000530927 RBMS2Q15434 407 aaKnown RBP14.41□□□□□ -0.1
GMDS-208ENST00000530927 OR10W1Q8NGF6 305 aa14.41□□□□□ -0.1
GMDS-208ENST00000530927 OR4A5Q8NH83 315 aa14.41□□□□□ -0.1
GMDS-208ENST00000530927 ZNF486Q96H40 463 aaPredicted RBP14.41□□□□□ -0.1
GMDS-208ENST00000530927 DBX1A6NMT0 343 aa14.4□□□□□ -0.1
GMDS-208ENST00000530927 K7EIL1 84 aa14.4□□□□□ -0.1
GMDS-208ENST00000530927 OR2J3O76001 311 aa14.4□□□□□ -0.1
GMDS-208ENST00000530927 HNRNPCP07910 306 aaKnown RBP eCLIP14.4□□□□□ -0.11e-6■■□□□ 13.3
GMDS-208ENST00000530927 S100GP29377 79 aa14.4□□□□□ -0.1
GMDS-208ENST00000530927 PIGPP57054 158 aa14.4□□□□□ -0.1
GMDS-208ENST00000530927 MCRIP2Q9BUT9 160 aaKnown RBP14.4□□□□□ -0.1
GMDS-208ENST00000530927 S4R3C0 116 aa14.4□□□□□ -0.1
GMDS-208ENST00000530927 FAM240BA0A1B0GVZ2 78 aa14.39□□□□□ -0.11
GMDS-208ENST00000530927 CTSDP07339 412 aaPredicted RBP14.39□□□□□ -0.11
GMDS-208ENST00000530927 ERVK-16P61578 105 aa14.39□□□□□ -0.11
GMDS-208ENST00000530927 IZUMO4Q1ZYL8 232 aa14.39□□□□□ -0.11
GMDS-208ENST00000530927 MRAPQ8TCY5 172 aa14.39□□□□□ -0.11
GMDS-208ENST00000530927 TP53RKQ96S44 253 aa14.39□□□□□ -0.11
GMDS-208ENST00000530927 COPZ2Q9P299 210 aa14.39□□□□□ -0.11
GMDS-208ENST00000530927 GPR132Q9UNW8 380 aa14.39□□□□□ -0.11
GMDS-208ENST00000530927 C14orf166Q9Y224 244 aaKnown RBP14.39□□□□□ -0.11
GMDS-208ENST00000530927 TRBV9A0A0B4J1U6 114 aa14.38□□□□□ -0.11
GMDS-208ENST00000530927 A0A0G2JLM5 398 aa14.38□□□□□ -0.11
GMDS-208ENST00000530927 NPIPB5A8MRT5 1133 aa14.38□□□□□ -0.11
GMDS-208ENST00000530927 OVOL1O14753 267 aa14.38□□□□□ -0.11
GMDS-208ENST00000530927 NDUFB6O95139 128 aa14.38□□□□□ -0.11
GMDS-208ENST00000530927 BRI3O95415 125 aa14.38□□□□□ -0.11
GMDS-208ENST00000530927 IGHV3-23P01764 117 aa14.38□□□□□ -0.11
GMDS-208ENST00000530927 PSMB6P28072 239 aa14.38□□□□□ -0.11
GMDS-208ENST00000530927 SP6Q3SY56 376 aa14.38□□□□□ -0.11
GMDS-208ENST00000530927 ZNF343Q6P1L6 599 aa14.38□□□□□ -0.11
GMDS-208ENST00000530927 FANCD2OSQ96PS1 177 aa14.38□□□□□ -0.11
GMDS-208ENST00000530927 AIFM2Q9BRQ8 373 aa14.38□□□□□ -0.11
GMDS-208ENST00000530927 TEX50A0A1B0GTY4 177 aa14.37□□□□□ -0.11
GMDS-208ENST00000530927 IGLC7A0M8Q6 106 aa14.37□□□□□ -0.11
GMDS-208ENST00000530927 CTRB1P17538 263 aa14.37□□□□□ -0.11
GMDS-208ENST00000530927 RND3P61587 244 aa14.37□□□□□ -0.11
GMDS-208ENST00000530927 EXOSC2Q13868 293 aaKnown RBP14.37□□□□□ -0.11
GMDS-208ENST00000530927 C9orf66Q5T8R8 295 aa14.37□□□□□ -0.11
GMDS-208ENST00000530927 CTRB2Q6GPI1 263 aa14.37□□□□□ -0.11
GMDS-208ENST00000530927 HAPLN4Q86UW8 402 aa14.37□□□□□ -0.11
GMDS-208ENST00000530927 ENKURQ8TC29 256 aa14.37□□□□□ -0.11
GMDS-208ENST00000530927 SEC22AQ96IW7 307 aa14.37□□□□□ -0.11
GMDS-208ENST00000530927 COMMD5Q9GZQ3 224 aa14.37□□□□□ -0.11
GMDS-208ENST00000530927 C5orf66Q9H5L9 145 aa14.37□□□□□ -0.11
GMDS-208ENST00000530927 ZNF257Q9Y2Q1 563 aa14.37□□□□□ -0.11
GMDS-208ENST00000530927 DMRT1Q9Y5R6 373 aa14.37□□□□□ -0.11
GMDS-208ENST00000530927 NDUFB8O95169 186 aa14.36□□□□□ -0.11
GMDS-208ENST00000530927 TCRBP04435 133 aa14.36□□□□□ -0.11
GMDS-208ENST00000530927 C15orf32Q32M92 178 aa14.36□□□□□ -0.11
GMDS-208ENST00000530927 CCDC71LQ8N9Z2 235 aa14.36□□□□□ -0.11
GMDS-208ENST00000530927 USMG5Q96IX5 58 aa14.36□□□□□ -0.11
GMDS-208ENST00000530927 RTBDNQ9BSG5 229 aaPredicted RBP14.36□□□□□ -0.11
GMDS-208ENST00000530927 HINT2Q9BX68 163 aa14.36□□□□□ -0.11
GMDS-208ENST00000530927 RANGRFQ9HD47 186 aaPredicted RBP14.36□□□□□ -0.11
GMDS-208ENST00000530927 CRYGCP07315 174 aa14.35□□□□□ -0.11
GMDS-208ENST00000530927 ATP5G2Q06055 141 aa14.35□□□□□ -0.11
GMDS-208ENST00000530927 REC114Q7Z4M0 266 aa14.35□□□□□ -0.11
GMDS-208ENST00000530927 NRARPQ7Z6K4 114 aa14.35□□□□□ -0.11
GMDS-208ENST00000530927 DUSP18Q8NEJ0 188 aa14.35□□□□□ -0.11
GMDS-208ENST00000530927 CHAC2Q8WUX2 184 aa14.35□□□□□ -0.11
GMDS-208ENST00000530927 PRR25Q96S07 402 aa14.35□□□□□ -0.11
GMDS-208ENST00000530927 QTRT1Q9BXR0 403 aaKnown RBP14.35□□□□□ -0.11
GMDS-208ENST00000530927 GPR61Q9BZJ8 451 aa14.35□□□□□ -0.11
GMDS-208ENST00000530927 PEF1Q9UBV8 284 aaKnown RBP14.35□□□□□ -0.11
GMDS-208ENST00000530927 FBXL7Q9UJT9 491 aa14.35□□□□□ -0.11
GMDS-208ENST00000530927 OR51B2Q9Y5P1 312 aa14.35□□□□□ -0.11
GMDS-208ENST00000530927 C3orf85A0A1B0GTC6 90 aa14.34□□□□□ -0.11
GMDS-208ENST00000530927 FAM223BA6NKX1 122 aa14.34□□□□□ -0.11
GMDS-208ENST00000530927 PPP5D1E7EU14 171 aa14.34□□□□□ -0.11
GMDS-208ENST00000530927 H0Y980 276 aa14.34□□□□□ -0.11
GMDS-208ENST00000530927 SAP30O75446 220 aa14.34□□□□□ -0.11
GMDS-208ENST00000530927 IGKV1-5P01602 117 aa14.34□□□□□ -0.11
GMDS-208ENST00000530927 WT1-ASQ06250 92 aa14.34□□□□□ -0.11
GMDS-208ENST00000530927 SLC25A42Q86VD7 318 aa14.34□□□□□ -0.11
GMDS-208ENST00000530927 FAM223AQ8IWN6 122 aa14.34□□□□□ -0.11
GMDS-208ENST00000530927 NECAP1Q8NC96 275 aa14.34□□□□□ -0.11
GMDS-208ENST00000530927 NEURL2Q9BR09 285 aa14.34□□□□□ -0.11
GMDS-208ENST00000530927 MFSD2BA6NFX1 497 aa14.33□□□□□ -0.11
GMDS-208ENST00000530927 BMPR1BO00238 502 aa14.33□□□□□ -0.11
GMDS-208ENST00000530927 HLA-AP01891 365 aaKnown RBP14.33□□□□□ -0.11
GMDS-208ENST00000530927 SERPINE2P07093 398 aa14.33□□□□□ -0.11
GMDS-208ENST00000530927 TRAPPC2P0DI81 140 aa14.33□□□□□ -0.11
GMDS-208ENST00000530927 TRAPPC2BP0DI82 140 aa14.33□□□□□ -0.11
GMDS-208ENST00000530927 SYNJ2BPP57105 145 aa14.33□□□□□ -0.11
GMDS-208ENST00000530927 ACSM6Q6P461 480 aa14.33□□□□□ -0.11
GMDS-208ENST00000530927 TMED4Q7Z7H5 227 aa14.33□□□□□ -0.11
GMDS-208ENST00000530927 C20orf85Q9H1P6 137 aa14.33□□□□□ -0.11
GMDS-208ENST00000530927 NDUFA4L2Q9NRX3 87 aa14.33□□□□□ -0.11
GMDS-208ENST00000530927 IGLV11-55A0A075B6I3 123 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms