RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 OR1L1Q8NH94 360 aa4.9□□□□□ -1.63
CSDE1-213ENST00000530784 CT45A3Q8NHU0 189 aa4.9□□□□□ -1.63
CSDE1-213ENST00000530784 SMIM19Q96E16 107 aa4.9□□□□□ -1.63
CSDE1-213ENST00000530784 RBMXL1Q96E39 390 aaKnown RBP4.9□□□□□ -1.63
CSDE1-213ENST00000530784 ZNF184Q99676 751 aaPredicted RBP4.9□□□□□ -1.63
CSDE1-213ENST00000530784 ZNF251Q9BRH9 671 aa4.9□□□□□ -1.63
CSDE1-213ENST00000530784 OR51J1Q9H342 316 aa4.9□□□□□ -1.63
CSDE1-213ENST00000530784 WSB1Q9Y6I7 421 aa4.9□□□□□ -1.63
CSDE1-213ENST00000530784 IGHV7-81A0A0B4J1V7 117 aa4.89□□□□□ -1.63
CSDE1-213ENST00000530784 NBR2O15453 112 aa4.89□□□□□ -1.63
CSDE1-213ENST00000530784 CA11O75493 328 aa4.89□□□□□ -1.63
CSDE1-213ENST00000530784 FCER2P06734 321 aa4.89□□□□□ -1.63
CSDE1-213ENST00000530784 FCGR3AP08637 254 aa4.89□□□□□ -1.63
CSDE1-213ENST00000530784 RCC1P18754 421 aaPredicted RBP4.89□□□□□ -1.63
CSDE1-213ENST00000530784 BLVRBP30043 206 aaPredicted RBP4.89□□□□□ -1.63
CSDE1-213ENST00000530784 VHLP40337 213 aa4.89□□□□□ -1.63
CSDE1-213ENST00000530784 RAB9AP51151 201 aa4.89□□□□□ -1.63
CSDE1-213ENST00000530784 ADARB1P78563 741 aaKnown RBP4.89□□□□□ -1.63
CSDE1-213ENST00000530784 GNMTQ14749 295 aa4.89□□□□□ -1.63
CSDE1-213ENST00000530784 ANKRD55Q3KP44 614 aa4.89□□□□□ -1.63
CSDE1-213ENST00000530784 OR2G6Q5TZ20 316 aa4.89□□□□□ -1.63
CSDE1-213ENST00000530784 ZFP1Q6P2D0 407 aa4.89□□□□□ -1.63
CSDE1-213ENST00000530784 GLIPR1L1Q6UWM5 242 aa4.89□□□□□ -1.63
CSDE1-213ENST00000530784 TMPRSS11AQ6ZMR5 421 aa4.89□□□□□ -1.63
CSDE1-213ENST00000530784 KRTAP11-1Q8IUC1 163 aa4.89□□□□□ -1.63
CSDE1-213ENST00000530784 GAPTQ8N292 157 aa4.89□□□□□ -1.63
CSDE1-213ENST00000530784 JAGN1Q8N5M9 183 aa4.89□□□□□ -1.63
CSDE1-213ENST00000530784 OR6Q1Q8NGQ2 317 aa4.89□□□□□ -1.63
CSDE1-213ENST00000530784 APH1BQ8WW43 257 aa4.89□□□□□ -1.63
CSDE1-213ENST00000530784 DCUN1D4Q92564 292 aa4.89□□□□□ -1.63
CSDE1-213ENST00000530784 MRPS24Q96EL2 167 aaKnown RBP4.89□□□□□ -1.63
CSDE1-213ENST00000530784 CXorf58Q96LI9 332 aa4.89□□□□□ -1.63
CSDE1-213ENST00000530784 C9orf16Q9BUW7 83 aa4.89□□□□□ -1.63
CSDE1-213ENST00000530784 MRPL20Q9BYC9 149 aaKnown RBP4.89□□□□□ -1.63
CSDE1-213ENST00000530784 CST11Q9H112 138 aa4.89□□□□□ -1.63
CSDE1-213ENST00000530784 ALX4Q9H161 411 aaPredicted RBP4.89□□□□□ -1.63
CSDE1-213ENST00000530784 TAF9BQ9HBM6 251 aa4.89□□□□□ -1.63
CSDE1-213ENST00000530784 OR2S2Q9NQN1 319 aa4.89□□□□□ -1.63
CSDE1-213ENST00000530784 KCNIP1Q9NZI2 227 aa4.89□□□□□ -1.63
CSDE1-213ENST00000530784 JPT1Q9UK76 154 aa4.89□□□□□ -1.63
CSDE1-213ENST00000530784 ERGIC3Q9Y282 383 aa4.89□□□□□ -1.63
CSDE1-213ENST00000530784 PEX16Q9Y5Y5 336 aa4.89□□□□□ -1.63
CSDE1-213ENST00000530784 TRAV8-7A0A075B6U6 113 aa4.88□□□□□ -1.63
CSDE1-213ENST00000530784 LOC100130705A0A1B0GUX0 176 aa4.88□□□□□ -1.63
CSDE1-213ENST00000530784 IRGMA1A4Y4 181 aa4.88□□□□□ -1.63
CSDE1-213ENST00000530784 C5orf51A6NDU8 294 aa4.88□□□□□ -1.63
CSDE1-213ENST00000530784 LINC01619G3V211 115 aa4.88□□□□□ -1.63
CSDE1-213ENST00000530784 CRTAPO75718 401 aaPredicted RBP4.88□□□□□ -1.63
CSDE1-213ENST00000530784 SC5DO75845 299 aa4.88□□□□□ -1.63
CSDE1-213ENST00000530784 MAS1P04201 325 aa4.88□□□□□ -1.63
CSDE1-213ENST00000530784 LGALS1P09382 135 aaKnown RBP4.88□□□□□ -1.63
CSDE1-213ENST00000530784 OR8U9P0C7N5 309 aa4.88□□□□□ -1.63
CSDE1-213ENST00000530784 SPNP16150 400 aa4.88□□□□□ -1.63
CSDE1-213ENST00000530784 MGMTP16455 207 aa4.88□□□□□ -1.63
CSDE1-213ENST00000530784 IGFBP3P17936 291 aaPredicted RBP4.88□□□□□ -1.63
CSDE1-213ENST00000530784 MYL12AP19105 171 aa4.88□□□□□ -1.63
CSDE1-213ENST00000530784 CNTFRP26992 372 aa4.88□□□□□ -1.63
CSDE1-213ENST00000530784 DCKP27707 260 aa4.88□□□□□ -1.63
CSDE1-213ENST00000530784 PPP1CCP36873 323 aaKnown RBP4.88□□□□□ -1.63
CSDE1-213ENST00000530784 ETV1P50549 477 aa4.88□□□□□ -1.63
CSDE1-213ENST00000530784 PITPNAQ00169 270 aa4.88□□□□□ -1.63
CSDE1-213ENST00000530784 C5orf64Q2M2E5 130 aa4.88□□□□□ -1.63
CSDE1-213ENST00000530784 Q499Y3 187 aa4.88□□□□□ -1.63
CSDE1-213ENST00000530784 MORN2Q502X0 79 aa4.88□□□□□ -1.63
CSDE1-213ENST00000530784 YIF1BQ5BJH7 314 aa4.88□□□□□ -1.63
CSDE1-213ENST00000530784 ZNF833PQ6ZTB9 187 aa4.88□□□□□ -1.63
CSDE1-213ENST00000530784 TCTEX1D1Q8N7M0 179 aa4.88□□□□□ -1.63
CSDE1-213ENST00000530784 MINDY2Q8NBR6 621 aa4.88□□□□□ -1.63
CSDE1-213ENST00000530784 ARPC1AQ92747 370 aa4.88□□□□□ -1.63
CSDE1-213ENST00000530784 GHSRQ92847 366 aa4.88□□□□□ -1.63
CSDE1-213ENST00000530784 DLX4Q92988 240 aaPredicted RBP4.88□□□□□ -1.63
CSDE1-213ENST00000530784 OR4C12Q96R67 309 aa4.88□□□□□ -1.63
CSDE1-213ENST00000530784 NABP2Q9BQ15 211 aa4.88□□□□□ -1.63
CSDE1-213ENST00000530784 FUNDC2Q9BWH2 189 aa4.88□□□□□ -1.63
CSDE1-213ENST00000530784 ANKRD60Q9BZ19 345 aa4.88□□□□□ -1.63
CSDE1-213ENST00000530784 SELENOIQ9C0D9 397 aa4.88□□□□□ -1.63
CSDE1-213ENST00000530784 BANF2Q9H503 90 aa4.88□□□□□ -1.63
CSDE1-213ENST00000530784 FGF20Q9NP95 211 aaPredicted RBP4.88□□□□□ -1.63
CSDE1-213ENST00000530784 BABAM2Q9NXR7 383 aa4.88□□□□□ -1.63
CSDE1-213ENST00000530784 LCE6AA0A183 80 aa4.87□□□□□ -1.63
CSDE1-213ENST00000530784 TRIM64CA6NLI5 447 aa4.87□□□□□ -1.63
CSDE1-213ENST00000530784 SOX15O60248 233 aa4.87□□□□□ -1.63
CSDE1-213ENST00000530784 YPEL1O60688 119 aa4.87□□□□□ -1.63
CSDE1-213ENST00000530784 PDCD6O75340 191 aa4.87□□□□□ -1.63
CSDE1-213ENST00000530784 GPX5O75715 221 aa4.87□□□□□ -1.63
CSDE1-213ENST00000530784 NDUFA3O95167 84 aa4.87□□□□□ -1.63
CSDE1-213ENST00000530784 LALBAP00709 142 aa4.87□□□□□ -1.63
CSDE1-213ENST00000530784 GLAP06280 429 aa4.87□□□□□ -1.63
CSDE1-213ENST00000530784 SNRPCP09234 159 aaKnown RBP4.87□□□□□ -1.63
CSDE1-213ENST00000530784 GIG44P09565 113 aaPredicted RBP4.87□□□□□ -1.63
CSDE1-213ENST00000530784 SAA2P0DJI9 122 aaPredicted RBP4.87□□□□□ -1.63
CSDE1-213ENST00000530784 FUT3P21217 361 aa4.87□□□□□ -1.63
CSDE1-213ENST00000530784 HERV-K104P63124 156 aa4.87□□□□□ -1.63
CSDE1-213ENST00000530784 HTD2P86397 168 aa4.87□□□□□ -1.63
CSDE1-213ENST00000530784 MED21Q13503 144 aa4.87□□□□□ -1.63
CSDE1-213ENST00000530784 PLGLAQ15195 96 aa4.87□□□□□ -1.63
CSDE1-213ENST00000530784 HAGHQ16775 308 aa4.87□□□□□ -1.63
CSDE1-213ENST00000530784 ZNF660Q6AZW8 331 aaPredicted RBP4.87□□□□□ -1.63
CSDE1-213ENST00000530784 DMKNQ6E0U4 476 aaPredicted RBP4.87□□□□□ -1.63
CSDE1-213ENST00000530784 PYHIN1Q6K0P9 492 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms