RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 F6UZH7 168 aa9.57□□□□□ -0.88
USP35-207ENST00000530546 SPINT2O43291 252 aa9.57□□□□□ -0.88
USP35-207ENST00000530546 SYNGR2O43760 224 aa9.57□□□□□ -0.88
USP35-207ENST00000530546 SLC25A6P12236 298 aa9.57□□□□□ -0.88
USP35-207ENST00000530546 CTRLP40313 264 aa9.57□□□□□ -0.88
USP35-207ENST00000530546 UBE2G2P60604 165 aa9.57□□□□□ -0.88
USP35-207ENST00000530546 FAM234AQ9H0X4 552 aa9.57□□□□□ -0.88
USP35-207ENST00000530546 PSENENQ9NZ42 101 aa9.57□□□□□ -0.88
USP35-207ENST00000530546 GNG12Q9UBI6 72 aa9.57□□□□□ -0.88
USP35-207ENST00000530546 A0A1B0GUS0 222 aa9.57□□□□□ -0.88
USP35-207ENST00000530546 S1PR2O95136 353 aa9.57□□□□□ -0.88
USP35-207ENST00000530546 COMPP49747 757 aaPredicted RBP9.57□□□□□ -0.88
USP35-207ENST00000530546 HBG1P69891 147 aa9.57□□□□□ -0.88
USP35-207ENST00000530546 HBG2P69892 147 aa9.57□□□□□ -0.88
USP35-207ENST00000530546 MSMO1Q15800 293 aa9.57□□□□□ -0.88
USP35-207ENST00000530546 SPANXN5Q5MJ07 72 aa9.57□□□□□ -0.88
USP35-207ENST00000530546 C1orf174Q8IYL3 243 aa9.57□□□□□ -0.88
USP35-207ENST00000530546 LYG1Q8N1E2 194 aa9.57□□□□□ -0.88
USP35-207ENST00000530546 Q8NA96 180 aa9.57□□□□□ -0.88
USP35-207ENST00000530546 OR1L6Q8NGR2 347 aa9.57□□□□□ -0.88
USP35-207ENST00000530546 CORO2AQ92828 525 aa9.57□□□□□ -0.88
USP35-207ENST00000530546 LSM10Q969L4 123 aaKnown RBP9.57□□□□□ -0.88
USP35-207ENST00000530546 COX11Q9Y6N1 276 aa9.57□□□□□ -0.88
USP35-207ENST00000530546 ODAMA1E959 279 aa9.57□□□□□ -0.88
USP35-207ENST00000530546 CLDN1O95832 211 aa9.57□□□□□ -0.88
USP35-207ENST00000530546 CD40P25942 277 aa9.57□□□□□ -0.88
USP35-207ENST00000530546 CDKN1AP38936 164 aa9.57□□□□□ -0.88
USP35-207ENST00000530546 SELENOVP59797 346 aa9.57□□□□□ -0.88
USP35-207ENST00000530546 RPS16P62249 146 aaKnown RBP9.57□□□□□ -0.88
USP35-207ENST00000530546 ZNF525Q8N782 197 aa9.57□□□□□ -0.88
USP35-207ENST00000530546 HSPB7Q9UBY9 170 aa9.57□□□□□ -0.88
USP35-207ENST00000530546 TIMM9Q9Y5J7 89 aa9.57□□□□□ -0.88
USP35-207ENST00000530546 USF3Q68DE3 2245 aa9.57□□□□□ -0.88
USP35-207ENST00000530546 LOC105371242A0A075B767 164 aa9.56□□□□□ -0.88
USP35-207ENST00000530546 ADMP35318 185 aa9.56□□□□□ -0.88
USP35-207ENST00000530546 SUMO1P63165 101 aaKnown RBP9.56□□□□□ -0.88
USP35-207ENST00000530546 TNFAIP6P98066 277 aaPredicted RBP9.56□□□□□ -0.88
USP35-207ENST00000530546 DUX4L9Q6RFH8 374 aaPredicted RBP9.56□□□□□ -0.88
USP35-207ENST00000530546 OR4F5Q8NH21 305 aa9.56□□□□□ -0.88
USP35-207ENST00000530546 OR4F4Q96R69 305 aa9.56□□□□□ -0.88
USP35-207ENST00000530546 IGHV2-70DA0A0C4DH43 119 aa9.56□□□□□ -0.88
USP35-207ENST00000530546 RBMXL2O75526 392 aaKnown RBP9.56□□□□□ -0.88
USP35-207ENST00000530546 HNRNPA3P51991 378 aaKnown RBP9.56□□□□□ -0.88
USP35-207ENST00000530546 CATR1Q13166 79 aa9.56□□□□□ -0.88
USP35-207ENST00000530546 TBR1Q16650 682 aa9.56□□□□□ -0.88
USP35-207ENST00000530546 SPINK9Q5DT21 86 aa9.56□□□□□ -0.88
USP35-207ENST00000530546 LEAP2Q969E1 77 aa9.56□□□□□ -0.88
USP35-207ENST00000530546 NEIL1Q96FI4 390 aaPredicted RBP9.56□□□□□ -0.88
USP35-207ENST00000530546 PATZ1Q9HBE1 687 aaKnown RBP9.56□□□□□ -0.88
USP35-207ENST00000530546 CD33P20138 364 aa9.55□□□□□ -0.88
USP35-207ENST00000530546 RPS20P60866 119 aaKnown RBP9.55□□□□□ -0.88
USP35-207ENST00000530546 ARL16Q0P5N6 197 aa9.55□□□□□ -0.88
USP35-207ENST00000530546 ZCCHC24Q8N2G6 241 aaKnown RBP9.55□□□□□ -0.88
USP35-207ENST00000530546 NUDT10Q8NFP7 164 aa9.55□□□□□ -0.88
USP35-207ENST00000530546 WDR61Q9GZS3 305 aaKnown RBP9.55□□□□□ -0.88
USP35-207ENST00000530546 CHODLQ9H9P2 273 aa9.55□□□□□ -0.88
USP35-207ENST00000530546 ELOVL5Q9NYP7 299 aa9.55□□□□□ -0.88
USP35-207ENST00000530546 LINC00473A8K010 186 aa9.55□□□□□ -0.88
USP35-207ENST00000530546 C15orf65H3BRN8 121 aa9.55□□□□□ -0.88
USP35-207ENST00000530546 TMPRSS2O15393 492 aa9.55□□□□□ -0.88
USP35-207ENST00000530546 FAM87AP0C7U9 286 aa9.55□□□□□ -0.88
USP35-207ENST00000530546 SPATA45Q537H7 98 aa9.55□□□□□ -0.88
USP35-207ENST00000530546 ZNF709Q8N972 641 aa9.55□□□□□ -0.88
USP35-207ENST00000530546 PPP1R35Q8TAP8 253 aa9.55□□□□□ -0.88
USP35-207ENST00000530546 TXN2Q99757 166 aa9.55□□□□□ -0.88
USP35-207ENST00000530546 TP53TG3Q9ULZ0 132 aa9.55□□□□□ -0.88
USP35-207ENST00000530546 TRAV9-1A0A075B6T8 112 aa9.54□□□□□ -0.88
USP35-207ENST00000530546 CTXND1A0A1B0GTU2 59 aa9.54□□□□□ -0.88
USP35-207ENST00000530546 C16orf97H3BN30 126 aa9.54□□□□□ -0.88
USP35-207ENST00000530546 MGST3O14880 152 aa9.54□□□□□ -0.88
USP35-207ENST00000530546 IGHV1-46P01743 117 aa9.54□□□□□ -0.88
USP35-207ENST00000530546 IGLC2P0DOY2 106 aa9.54□□□□□ -0.88
USP35-207ENST00000530546 IGLC3P0DOY3 106 aa9.54□□□□□ -0.88
USP35-207ENST00000530546 CRISP2P16562 243 aa9.54□□□□□ -0.88
USP35-207ENST00000530546 GPR12P47775 334 aa9.54□□□□□ -0.88
USP35-207ENST00000530546 LINC00310P59036 64 aa9.54□□□□□ -0.88
USP35-207ENST00000530546 BRWD1-AS2P59051 145 aa9.54□□□□□ -0.88
USP35-207ENST00000530546 RNF151Q2KHN1 245 aa9.54□□□□□ -0.88
USP35-207ENST00000530546 KLHDC1Q8N7A1 406 aa9.54□□□□□ -0.88
USP35-207ENST00000530546 ZBTB34Q8NCN2 500 aa9.54□□□□□ -0.88
USP35-207ENST00000530546 OR4C5Q8NGB2 326 aa9.54□□□□□ -0.88
USP35-207ENST00000530546 SNRNP40Q96DI7 357 aaKnown RBP9.54□□□□□ -0.88
USP35-207ENST00000530546 ZNF586Q9NXT0 402 aa9.54□□□□□ -0.88
USP35-207ENST00000530546 BSNQ9UPA5 3926 aa9.54□□□□□ -0.88
USP35-207ENST00000530546 IGLV3-9A0A075B6K5 115 aa9.54□□□□□ -0.88
USP35-207ENST00000530546 SERF1AO75920 110 aa9.54□□□□□ -0.88
USP35-207ENST00000530546 WNT2P09544 360 aa9.54□□□□□ -0.88
USP35-207ENST00000530546 CCL8P80075 99 aa9.54□□□□□ -0.88
USP35-207ENST00000530546 FBLN7Q53RD9 439 aa9.54□□□□□ -0.88
USP35-207ENST00000530546 UTF1Q5T230 341 aa9.54□□□□□ -0.88
USP35-207ENST00000530546 Q6ZN92 141 aa9.54□□□□□ -0.88
USP35-207ENST00000530546 RPP25LQ8N5L8 163 aaKnown RBP9.54□□□□□ -0.88
USP35-207ENST00000530546 SAMD10Q9BYL1 202 aa9.54□□□□□ -0.88
USP35-207ENST00000530546 CLN8Q9UBY8 286 aa9.54□□□□□ -0.88
USP35-207ENST00000530546 MRPS16Q9Y3D3 137 aaKnown RBP9.54□□□□□ -0.88
USP35-207ENST00000530546 HYPMO75409 117 aa9.54□□□□□ -0.88
USP35-207ENST00000530546 Q0VG73 95 aa9.54□□□□□ -0.88
USP35-207ENST00000530546 GCM1Q9NP62 436 aa9.54□□□□□ -0.88
USP35-207ENST00000530546 BET1LQ9NYM9 111 aa9.54□□□□□ -0.88
USP35-207ENST00000530546 GRIFINA4D1Z8 144 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms