RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 GOLGA8MH3BSY2 632 aa0.19□□□□□ -2.38
NUP98-218ENST00000530516 C19orf84I3L1E1 186 aa0.19□□□□□ -2.38
NUP98-218ENST00000530516 LST1O00453 97 aa0.19□□□□□ -2.38
NUP98-218ENST00000530516 BIRC5O15392 142 aa0.19□□□□□ -2.38
NUP98-218ENST00000530516 COCHO43405 550 aa0.19□□□□□ -2.38
NUP98-218ENST00000530516 KRT7P08729 469 aa0.19□□□□□ -2.38
NUP98-218ENST00000530516 SRP19P09132 144 aaKnown RBP0.19□□□□□ -2.38
NUP98-218ENST00000530516 OCMP0CE72 109 aaPredicted RBP0.19□□□□□ -2.38
NUP98-218ENST00000530516 HLA-DMBP28068 263 aa0.19□□□□□ -2.38
NUP98-218ENST00000530516 S100A7P31151 101 aa0.19□□□□□ -2.38
NUP98-218ENST00000530516 ZNF80P51504 273 aaPredicted RBP0.19□□□□□ -2.38
NUP98-218ENST00000530516 UBE2IP63279 158 aaKnown RBP0.19□□□□□ -2.38
NUP98-218ENST00000530516 RUNX1Q01196 453 aa0.19□□□□□ -2.38
NUP98-218ENST00000530516 CAV1Q03135 178 aa0.19□□□□□ -2.38
NUP98-218ENST00000530516 ZNF846Q147U1 533 aa0.19□□□□□ -2.38
NUP98-218ENST00000530516 BATFQ16520 125 aa0.19□□□□□ -2.38
NUP98-218ENST00000530516 TNFAIP8L3Q5GJ75 292 aa0.19□□□□□ -2.38
NUP98-218ENST00000530516 AAED1Q7RTV5 226 aa0.19□□□□□ -2.38
NUP98-218ENST00000530516 Q8N402 240 aa0.19□□□□□ -2.38
NUP98-218ENST00000530516 LINC00471Q8N535 108 aa0.19□□□□□ -2.38
NUP98-218ENST00000530516 TMEM251Q8N6I4 163 aa0.19□□□□□ -2.38
NUP98-218ENST00000530516 OR4D11Q8NGI4 311 aa0.19□□□□□ -2.38
NUP98-218ENST00000530516 SGMS2Q8NHU3 365 aa0.19□□□□□ -2.38
NUP98-218ENST00000530516 C11orf40Q8WZ69 217 aa0.19□□□□□ -2.38
NUP98-218ENST00000530516 DCUN1D5Q9BTE7 237 aa0.19□□□□□ -2.38
NUP98-218ENST00000530516 OR8D2Q9GZM6 311 aa0.19□□□□□ -2.38
NUP98-218ENST00000530516 OR51I2Q9H344 312 aa0.19□□□□□ -2.38
NUP98-218ENST00000530516 CHMP4BQ9H444 224 aaKnown RBP0.19□□□□□ -2.38
NUP98-218ENST00000530516 CXorf21Q9HAI6 301 aa0.19□□□□□ -2.38
NUP98-218ENST00000530516 FUT9Q9Y231 359 aa0.19□□□□□ -2.38
NUP98-218ENST00000530516 COQ4Q9Y3A0 265 aa0.19□□□□□ -2.38
NUP98-218ENST00000530516 TAF1LQ8IZX4 1826 aa0.19□□□□□ -2.38
NUP98-218ENST00000530516 FRAS1Q86XX4 4008 aa0.19□□□□□ -2.38
NUP98-218ENST00000530516 ADGRB2O60241 1585 aa0.19□□□□□ -2.38
NUP98-218ENST00000530516 PLXND1Q9Y4D7 1925 aa0.19□□□□□ -2.38
NUP98-218ENST00000530516 TOPBP1Q92547 1522 aa0.18□□□□□ -2.38
NUP98-218ENST00000530516 GGT3PA6NGU5 568 aa0.18□□□□□ -2.38
NUP98-218ENST00000530516 TRPC5OSA6NMA1 111 aa0.18□□□□□ -2.38
NUP98-218ENST00000530516 GOLGA6L19H0YKK7 550 aa0.18□□□□□ -2.38
NUP98-218ENST00000530516 I3L521 148 aa0.18□□□□□ -2.38
NUP98-218ENST00000530516 OR5F1O95221 314 aa0.18□□□□□ -2.38
NUP98-218ENST00000530516 YEATS4O95619 227 aa0.18□□□□□ -2.38
NUP98-218ENST00000530516 HLA-DRAP01903 254 aa0.18□□□□□ -2.38
NUP98-218ENST00000530516 CLPSP04118 112 aa0.18□□□□□ -2.38
NUP98-218ENST00000530516 IL3P08700 152 aa0.18□□□□□ -2.38
NUP98-218ENST00000530516 BRS3P32247 399 aa0.18□□□□□ -2.38
NUP98-218ENST00000530516 TNFAIP6P98066 277 aaPredicted RBP0.18□□□□□ -2.38
NUP98-218ENST00000530516 RPL18Q07020 188 aaKnown RBP0.18□□□□□ -2.38
NUP98-218ENST00000530516 FABP9Q0Z7S8 132 aa0.18□□□□□ -2.38
NUP98-218ENST00000530516 STX5Q13190 355 aa0.18□□□□□ -2.38
NUP98-218ENST00000530516 SYPL2Q5VXT5 272 aa0.18□□□□□ -2.38
NUP98-218ENST00000530516 CLEC6AQ6EIG7 209 aa0.18□□□□□ -2.38
NUP98-218ENST00000530516 ZNF826PQ6ZT77 177 aa0.18□□□□□ -2.38
NUP98-218ENST00000530516 HIST2H3AQ71DI3 136 aa0.18□□□□□ -2.38
NUP98-218ENST00000530516 ZNF550Q7Z398 422 aa0.18□□□□□ -2.38
NUP98-218ENST00000530516 KCTD7Q96MP8 289 aa0.18□□□□□ -2.38
NUP98-218ENST00000530516 OBSCN-AS1Q96MR7 158 aa0.18□□□□□ -2.38
NUP98-218ENST00000530516 ERMAPQ96PL5 475 aaPredicted RBP0.18□□□□□ -2.38
NUP98-218ENST00000530516 NDEL1Q9GZM8 345 aa0.18□□□□□ -2.38
NUP98-218ENST00000530516 PXMP4Q9Y6I8 212 aa0.18□□□□□ -2.38
NUP98-218ENST00000530516 ALPK3Q96L96 1907 aa0.18□□□□□ -2.38
NUP98-218ENST00000530516 PLXNA4Q9HCM2 1894 aa0.18□□□□□ -2.38
NUP98-218ENST00000530516 KCPQ6ZWJ8 1503 aa0.18□□□□□ -2.38
NUP98-218ENST00000530516 MYH10P35580 1976 aa0.17□□□□□ -2.38
NUP98-218ENST00000530516 TTC21AQ8NDW8 1320 aa0.17□□□□□ -2.38
NUP98-218ENST00000530516 FABP5P3A8MUU1 101 aa0.17□□□□□ -2.38
NUP98-218ENST00000530516 SSNA1O43805 119 aa0.17□□□□□ -2.38
NUP98-218ENST00000530516 HYPMO75409 117 aa0.17□□□□□ -2.38
NUP98-218ENST00000530516 KCNE1P15382 129 aa0.17□□□□□ -2.38
NUP98-218ENST00000530516 UGT2B7P16662 529 aa0.17□□□□□ -2.38
NUP98-218ENST00000530516 MYL12AP19105 171 aa0.17□□□□□ -2.38
NUP98-218ENST00000530516 CCL1P22362 96 aa0.17□□□□□ -2.38
NUP98-218ENST00000530516 EIF2B2P49770 351 aaKnown RBP0.17□□□□□ -2.38
NUP98-218ENST00000530516 SUPT4H1P63272 117 aaKnown RBP0.17□□□□□ -2.38
NUP98-218ENST00000530516 CHD3Q12873 2000 aaKnown RBP0.17□□□□□ -2.38
NUP98-218ENST00000530516 RIC1Q4ADV7 1423 aa0.17□□□□□ -2.38
NUP98-218ENST00000530516 SPANXN5Q5MJ07 72 aa0.17□□□□□ -2.38
NUP98-218ENST00000530516 IBA57Q5T440 356 aaKnown RBP0.17□□□□□ -2.38
NUP98-218ENST00000530516 C1orf194Q5T5A4 169 aa0.17□□□□□ -2.38
NUP98-218ENST00000530516 CST9Q5W186 159 aa0.17□□□□□ -2.38
NUP98-218ENST00000530516 GLT8D1Q68CQ7 371 aa0.17□□□□□ -2.38
NUP98-218ENST00000530516 SPATA8Q6RVD6 105 aa0.17□□□□□ -2.38
NUP98-218ENST00000530516 DEFB128Q7Z7B8 93 aa0.17□□□□□ -2.38
NUP98-218ENST00000530516 PHF13Q86YI8 300 aaPredicted RBP0.17□□□□□ -2.38
NUP98-218ENST00000530516 NAV2Q8IVL1 2488 aa0.17□□□□□ -2.38
NUP98-218ENST00000530516 FUNDC1Q8IVP5 155 aa0.17□□□□□ -2.38
NUP98-218ENST00000530516 DOCK3Q8IZD9 2030 aa0.17□□□□□ -2.38
NUP98-218ENST00000530516 TMEM161BQ8NDZ6 487 aa0.17□□□□□ -2.38
NUP98-218ENST00000530516 WFDC11Q8NEX6 87 aa0.17□□□□□ -2.38
NUP98-218ENST00000530516 PAQR5Q9NXK6 330 aaPredicted RBP0.17□□□□□ -2.38
NUP98-218ENST00000530516 IL36BQ9NZH7 164 aa0.17□□□□□ -2.38
NUP98-218ENST00000530516 CKLFQ9UBR5 152 aa0.17□□□□□ -2.38
NUP98-218ENST00000530516 DKKL1Q9UK85 242 aa0.17□□□□□ -2.38
NUP98-218ENST00000530516 KLK9Q9UKQ9 250 aa0.17□□□□□ -2.38
NUP98-218ENST00000530516 KIAA1549Q9HCM3 1950 aa0.17□□□□□ -2.38
NUP98-218ENST00000530516 ZNF106Q9H2Y7 1883 aaKnown RBP0.16□□□□□ -2.38
NUP98-218ENST00000530516 DCCP43146 1447 aa0.16□□□□□ -2.38
NUP98-218ENST00000530516 IGKV1D-42A0A075B6H8 117 aa0.16□□□□□ -2.38
NUP98-218ENST00000530516 C1orf232A0A0U1RR37 186 aa0.16□□□□□ -2.38
NUP98-218ENST00000530516 M0R2N4 97 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms