RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 PLEKHA2Q9HB19 425 aa11.02□□□□□ -0.65
CAPN1-219ENST00000530495 OR4C46A6NHA9 309 aa11.01□□□□□ -0.65
CAPN1-219ENST00000530495 S1PR2O95136 353 aa11.01□□□□□ -0.65
CAPN1-219ENST00000530495 TRAPPC2P0DI81 140 aa11.01□□□□□ -0.65
CAPN1-219ENST00000530495 TRAPPC2BP0DI82 140 aa11.01□□□□□ -0.65
CAPN1-219ENST00000530495 RPL35AP18077 110 aaKnown RBP11.01□□□□□ -0.65
CAPN1-219ENST00000530495 WT1-ASQ06250 92 aa11.01□□□□□ -0.65
CAPN1-219ENST00000530495 CATR1Q13166 79 aa11.01□□□□□ -0.65
CAPN1-219ENST00000530495 THOC7Q6I9Y2 204 aaKnown RBP11.01□□□□□ -0.65
CAPN1-219ENST00000530495 SLC25A24Q6NUK1 477 aa11.01□□□□□ -0.65
CAPN1-219ENST00000530495 HSD17B13Q7Z5P4 300 aaPredicted RBP11.01□□□□□ -0.65
CAPN1-219ENST00000530495 HOGA1Q86XE5 327 aa11.01□□□□□ -0.65
CAPN1-219ENST00000530495 SLC5A7Q9GZV3 580 aa11.01□□□□□ -0.65
CAPN1-219ENST00000530495 TMEM140Q9NV12 185 aa11.01□□□□□ -0.65
CAPN1-219ENST00000530495 TXNL4BQ9NX01 149 aaKnown RBP11.01□□□□□ -0.65
CAPN1-219ENST00000530495 DAPK2Q9UIK4 370 aa11.01□□□□□ -0.65
CAPN1-219ENST00000530495 FRAS1Q86XX4 4008 aa11.01□□□□□ -0.65
CAPN1-219ENST00000530495 TEX50A0A1B0GTY4 177 aa11□□□□□ -0.65
CAPN1-219ENST00000530495 DEDDO75618 318 aa11□□□□□ -0.65
CAPN1-219ENST00000530495 OR13C7P0DN81 318 aa11□□□□□ -0.65
CAPN1-219ENST00000530495 GVQW1Q8N7I0 195 aa11□□□□□ -0.65
CAPN1-219ENST00000530495 DMBX1Q8NFW5 382 aa11□□□□□ -0.65
CAPN1-219ENST00000530495 CD300LFQ8TDQ1 290 aa11□□□□□ -0.65
CAPN1-219ENST00000530495 SCARB1Q8WTV0 552 aa11□□□□□ -0.65
CAPN1-219ENST00000530495 GIMAP1Q8WWP7 306 aa11□□□□□ -0.65
CAPN1-219ENST00000530495 CHRDL1Q9BU40 450 aa11□□□□□ -0.65
CAPN1-219ENST00000530495 RHBDL2Q9NX52 303 aa11□□□□□ -0.65
CAPN1-219ENST00000530495 BLOC1S6Q9UL45 172 aa11□□□□□ -0.65
CAPN1-219ENST00000530495 C15orf62A8K5M9 175 aa10.99□□□□□ -0.65
CAPN1-219ENST00000530495 F8W735 103 aaPredicted RBP10.99□□□□□ -0.65
CAPN1-219ENST00000530495 CTSDP07339 412 aaPredicted RBP10.99□□□□□ -0.65
CAPN1-219ENST00000530495 FCGR2BP31994 310 aaPredicted RBP10.99□□□□□ -0.65
CAPN1-219ENST00000530495 ADMP35318 185 aa10.99□□□□□ -0.65
CAPN1-219ENST00000530495 MFAP2P55001 183 aa10.99□□□□□ -0.65
CAPN1-219ENST00000530495 CMC4P56277 68 aaPredicted RBP10.99□□□□□ -0.65
CAPN1-219ENST00000530495 ZNF818PQ6ZRF7 136 aa10.99□□□□□ -0.65
CAPN1-219ENST00000530495 OR5B3Q8NH48 314 aa10.99□□□□□ -0.65
CAPN1-219ENST00000530495 LGALS14Q8TCE9 139 aa10.99□□□□□ -0.65
CAPN1-219ENST00000530495 C20orf24Q9BUV8 137 aa10.99□□□□□ -0.65
CAPN1-219ENST00000530495 CSTL1Q9H114 145 aa10.99□□□□□ -0.65
CAPN1-219ENST00000530495 NDUFA4L2Q9NRX3 87 aa10.99□□□□□ -0.65
CAPN1-219ENST00000530495 C21orf62Q9NYP8 219 aa10.99□□□□□ -0.65
CAPN1-219ENST00000530495 SMPXQ9UHP9 88 aa10.99□□□□□ -0.65
CAPN1-219ENST00000530495 RRP15Q9Y3B9 282 aaKnown RBP10.99□□□□□ -0.65
CAPN1-219ENST00000530495 TRAV18A0A075B6X5 111 aa10.98□□□□□ -0.65
CAPN1-219ENST00000530495 IGHV3OR16-8A0A075B7F1 116 aa10.98□□□□□ -0.65
CAPN1-219ENST00000530495 ANKRD65E5RJM6 399 aa10.98□□□□□ -0.65
CAPN1-219ENST00000530495 SCAND1P57086 179 aa10.98□□□□□ -0.65
CAPN1-219ENST00000530495 FXYD4P59646 89 aa10.98□□□□□ -0.65
CAPN1-219ENST00000530495 UBE2UQ5VVX9 321 aa10.98□□□□□ -0.65
CAPN1-219ENST00000530495 SFXN4Q6P4A7 337 aa10.98□□□□□ -0.65
CAPN1-219ENST00000530495 APRG1Q8IVJ8 170 aa10.98□□□□□ -0.65
CAPN1-219ENST00000530495 OR1L8Q8NGR8 309 aa10.98□□□□□ -0.65
CAPN1-219ENST00000530495 OR51H1Q8NH63 302 aa10.98□□□□□ -0.65
CAPN1-219ENST00000530495 GATAD1Q8WUU5 269 aa10.98□□□□□ -0.65
CAPN1-219ENST00000530495 CNBD2Q96M20 576 aa10.98□□□□□ -0.65
CAPN1-219ENST00000530495 C6orf62Q9GZU0 229 aaPredicted RBP10.98□□□□□ -0.65
CAPN1-219ENST00000530495 COMMD9Q9P000 198 aa10.98□□□□□ -0.65
CAPN1-219ENST00000530495 ETV7Q9Y603 341 aa10.98□□□□□ -0.65
CAPN1-219ENST00000530495 F11RQ9Y624 299 aaKnown RBP10.98□□□□□ -0.65
CAPN1-219ENST00000530495 MPTX1A8MV57 137 aa10.97□□□□□ -0.65
CAPN1-219ENST00000530495 ZNF207O43670 478 aaKnown RBP10.97□□□□□ -0.65
CAPN1-219ENST00000530495 MRPS14O60783 128 aaKnown RBP10.97□□□□□ -0.65
CAPN1-219ENST00000530495 CTSGP08311 255 aa10.97□□□□□ -0.65
CAPN1-219ENST00000530495 GNRHRP30968 328 aa10.97□□□□□ -0.65
CAPN1-219ENST00000530495 CADM3Q8N126 398 aa10.97□□□□□ -0.65
CAPN1-219ENST00000530495 OR5AP2Q8NGF4 316 aa10.97□□□□□ -0.65
CAPN1-219ENST00000530495 LSM10Q969L4 123 aaKnown RBP10.97□□□□□ -0.65
CAPN1-219ENST00000530495 SLC25A38Q96DW6 304 aa10.97□□□□□ -0.65
CAPN1-219ENST00000530495 ZNF414Q96IQ9 312 aa10.97□□□□□ -0.65
CAPN1-219ENST00000530495 RNF2Q99496 336 aa10.97□□□□□ -0.65
CAPN1-219ENST00000530495 RARRES2Q99969 163 aa10.97□□□□□ -0.65
CAPN1-219ENST00000530495 A0A0A6YYH2 397 aa10.96□□□□□ -0.65
CAPN1-219ENST00000530495 IGHV3-21A0A0B4J1V1 117 aa10.96□□□□□ -0.65
CAPN1-219ENST00000530495 A6NJ64 397 aa10.96□□□□□ -0.65
CAPN1-219ENST00000530495 K7EIM0 57 aa10.96□□□□□ -0.65
CAPN1-219ENST00000530495 CHEK1O14757 476 aa10.96□□□□□ -0.65
CAPN1-219ENST00000530495 ERVK-16P61578 105 aa10.96□□□□□ -0.65
CAPN1-219ENST00000530495 ZNF124Q15973 351 aa10.96□□□□□ -0.65
CAPN1-219ENST00000530495 AADACL3Q5VUY0 350 aa10.96□□□□□ -0.65
CAPN1-219ENST00000530495 OR5H6Q8NGV6 325 aa10.96□□□□□ -0.65
CAPN1-219ENST00000530495 C11orf45Q8TAV5 145 aa10.96□□□□□ -0.65
CAPN1-219ENST00000530495 BORCS5Q969J3 196 aa10.96□□□□□ -0.65
CAPN1-219ENST00000530495 RHPN1-AS1Q9BWJ2 59 aa10.96□□□□□ -0.65
CAPN1-219ENST00000530495 MFFQ9GZY8 342 aa10.96□□□□□ -0.65
CAPN1-219ENST00000530495 SSR3Q9UNL2 185 aa10.96□□□□□ -0.65
CAPN1-219ENST00000530495 IGHV7-4-1A0A0J9YVY3 117 aa10.95□□□□□ -0.66
CAPN1-219ENST00000530495 MARCH11A6NNE9 402 aa10.95□□□□□ -0.66
CAPN1-219ENST00000530495 IFNA4P05014 189 aa10.95□□□□□ -0.66
CAPN1-219ENST00000530495 F2RP25116 425 aa10.95□□□□□ -0.66
CAPN1-219ENST00000530495 SDC2P34741 201 aa10.95□□□□□ -0.66
CAPN1-219ENST00000530495 HSPA13P48723 471 aa10.95□□□□□ -0.66
CAPN1-219ENST00000530495 NANOS2P60321 138 aaKnown RBP10.95□□□□□ -0.66
CAPN1-219ENST00000530495 GABARAPL2P60520 117 aa10.95□□□□□ -0.66
CAPN1-219ENST00000530495 Q56UQ5 140 aa10.95□□□□□ -0.66
CAPN1-219ENST00000530495 DHRS11Q6UWP2 260 aa10.95□□□□□ -0.66
CAPN1-219ENST00000530495 TMEM17Q86X19 198 aa10.95□□□□□ -0.66
CAPN1-219ENST00000530495 UBAC2Q8NBM4 344 aa10.95□□□□□ -0.66
CAPN1-219ENST00000530495 TMEM116Q8NCL8 245 aa10.95□□□□□ -0.66
CAPN1-219ENST00000530495 OR11H2Q8NH07 326 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms