RNA–Protein interactions for RNA: ENST00000530036.1

RPUSD4-204, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-204ENST00000530036 UBE2E2Q96LR5 201 aa4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 TMEM56Q96MV1 263 aa4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 QTRT1Q9BXR0 403 aaKnown RBP4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 COMMD5Q9GZQ3 224 aa4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 ALX4Q9H161 411 aaPredicted RBP4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 MED28Q9H204 178 aa4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 KLK15Q9H2R5 256 aa4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 SLA2Q9H6Q3 261 aa4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 TMEM14BQ9NUH8 114 aa4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 KLK9Q9UKQ9 250 aa4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 PRNDQ9UKY0 176 aa4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 ALG5Q9Y673 324 aa4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 TMEM56-RWDD3S4R434 201 aa4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 DNAH3Q8TD57 4116 aa4.4□□□□□ -1.7
RPUSD4-204ENST00000530036 A0A1W2PRX2 142 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 HMX3A6NHT5 357 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 NPIPB5A8MRT5 1133 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 SNRPGP15A8MWD9 76 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 I3L521 148 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 RBMXL2O75526 392 aaKnown RBP4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 ATG12O94817 140 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 CRYGCP07315 174 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 APELAP0DMC3 54 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 PF4V1P10720 104 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 AREGP15514 252 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 CTRB1P17538 263 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 RAB9AP51151 201 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 BCAP31P51572 246 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 AKR1C2P52895 323 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 SRPXP78539 464 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 RUNX1Q01196 453 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 PPP1R1AQ13522 171 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 FHL3Q13643 280 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 IZUMO4Q1ZYL8 232 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 NMSQ5H8A3 153 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 KHDC1LQ5JSQ8 128 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 CTRB2Q6GPI1 263 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 ETV3LQ6ZN32 361 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 C18orf65Q6ZTR6 163 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 H2BFWTQ7Z2G1 175 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 ZNF429Q86V71 674 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 ZNF695Q8IW36 515 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 FAM219AQ8IW50 185 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 SELENOHQ8IZQ5 122 aaKnown RBP4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 C12orf45Q8N5I9 185 aaPredicted RBP4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 TTC9CQ8N5M4 171 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 SLC35G3Q8N808 338 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 ZNF491Q8N8L2 437 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 LRTM2Q8N967 370 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 KLHL30-AS1Q8NEE0 82 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 OR4F17Q8NGA8 305 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 OR1L8Q8NGR8 309 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 OR5B3Q8NH48 314 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 CASTOR1Q8WTX7 329 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 C4orf3Q8WVX3 66 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 LSM10Q969L4 123 aaKnown RBP4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 OR4F4Q96R69 305 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 PHB2Q99623 299 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 SRSF8Q9BRL6 282 aaKnown RBP4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 SEC22CQ9BRL7 303 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 NDUFA4L2Q9NRX3 87 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 FKBP11Q9NYL4 201 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 ZNF257Q9Y2Q1 563 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 NSG2Q9Y328 171 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 OR51B2Q9Y5P1 312 aa4.4□□□□□ -1.71
RPUSD4-204ENST00000530036 IGLV11-55A0A075B6I3 123 aa4.39□□□□□ -1.71
RPUSD4-204ENST00000530036 TRBV9A0A0B4J1U6 114 aa4.39□□□□□ -1.71
RPUSD4-204ENST00000530036 A0A0B4J293 547 aa4.39□□□□□ -1.71
RPUSD4-204ENST00000530036 A0A0B4J2A0 478 aa4.39□□□□□ -1.71
RPUSD4-204ENST00000530036 PIGBOS1A0A0B4J2F0 54 aa4.39□□□□□ -1.71
RPUSD4-204ENST00000530036 TEX50A0A1B0GTY4 177 aa4.39□□□□□ -1.71
RPUSD4-204ENST00000530036 DUXBA0A1W2PPF3 345 aa4.39□□□□□ -1.71
RPUSD4-204ENST00000530036 C9orf170A2RU37 121 aa4.39□□□□□ -1.71
RPUSD4-204ENST00000530036 INS-IGF2F8WCM5 200 aa4.39□□□□□ -1.71
RPUSD4-204ENST00000530036 SNAPC5O75971 98 aa4.39□□□□□ -1.71
RPUSD4-204ENST00000530036 SFT2D2O95562 160 aa4.39□□□□□ -1.71
RPUSD4-204ENST00000530036 HLA-AP01891 365 aaKnown RBP4.39□□□□□ -1.71
RPUSD4-204ENST00000530036 TRGV3P03979 118 aa4.39□□□□□ -1.71
RPUSD4-204ENST00000530036 LGALS1P09382 135 aaKnown RBP4.39□□□□□ -1.71
RPUSD4-204ENST00000530036 TRAPPC2P0DI81 140 aa4.39□□□□□ -1.71
RPUSD4-204ENST00000530036 TRAPPC2BP0DI82 140 aa4.39□□□□□ -1.71
RPUSD4-204ENST00000530036 PSMB6P28072 239 aa4.39□□□□□ -1.71
RPUSD4-204ENST00000530036 MECP2P51608 486 aaKnown RBP4.39□□□□□ -1.71
RPUSD4-204ENST00000530036 TPPP2P59282 170 aa4.39□□□□□ -1.71
RPUSD4-204ENST00000530036 HSPE1P61604 102 aaKnown RBP4.39□□□□□ -1.71
RPUSD4-204ENST00000530036 PRCDQ00LT1 54 aa4.39□□□□□ -1.71
RPUSD4-204ENST00000530036 WT1-ASQ06250 92 aa4.39□□□□□ -1.71
RPUSD4-204ENST00000530036 DHRS2Q13268 280 aa4.39□□□□□ -1.71
RPUSD4-204ENST00000530036 ANKRD55Q3KP44 614 aa4.39□□□□□ -1.71
RPUSD4-204ENST00000530036 PDLIM3Q53GG5 364 aaPredicted RBP4.39□□□□□ -1.71
RPUSD4-204ENST00000530036 TMEM268Q5VZI3 342 aa4.39□□□□□ -1.71
RPUSD4-204ENST00000530036 TMEM65Q6PI78 240 aa4.39□□□□□ -1.71
RPUSD4-204ENST00000530036 TREML4Q6UXN2 200 aa4.39□□□□□ -1.71
RPUSD4-204ENST00000530036 Q6ZRM9 215 aa4.39□□□□□ -1.71
RPUSD4-204ENST00000530036 C19orf35Q6ZS72 473 aa4.39□□□□□ -1.71
RPUSD4-204ENST00000530036 C8orf86Q6ZUL3 223 aa4.39□□□□□ -1.71
RPUSD4-204ENST00000530036 HSD17B13Q7Z5P4 300 aaPredicted RBP4.39□□□□□ -1.71
RPUSD4-204ENST00000530036 LYG2Q86SG7 212 aa4.39□□□□□ -1.71
RPUSD4-204ENST00000530036 LGI3Q8N145 548 aa4.39□□□□□ -1.71
RPUSD4-204ENST00000530036 ZNF114Q8NC26 417 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms